Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28m06
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical pr... 31 1.00
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 30 1.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 5.3
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 28 5.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 5.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 5.3
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 28 5.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 5.3
U29244-16|AAQ23126.1| 172|Caenorhabditis elegans Hypothetical p... 27 9.3
>U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical
protein T13C2.7 protein.
Length = 292
Score = 30.7 bits (66), Expect = 1.00
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 342 ITTPKYQLEIDEYERLKEEKKKMEDESAGWV 434
++T K ++E+DEYER K + K+ + ++ W+
Sbjct: 82 MSTMKMRVEVDEYERRKIKMKEAKKKAQDWI 112
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 21 VYFILFNLY-FQFESILK*FHLFEMASNENSQIKLN 125
V+F+LF F+S L+ H+F+MASN + K N
Sbjct: 16 VFFLLFIFSGINFQSFLQLLHIFKMASNSTNSKKQN 51
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 21 VYFILFNLY-FQFESILK*FHLFEMASNENSQIKLN 125
V+F+LF F+S L+ H+F+MASN + K N
Sbjct: 16 VFFLLFIFSGINFQSFLQLLHIFKMASNSTNSKKQN 51
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 246 WLPWLTHYANTSGTKVLNAIDYTGESLANFFGITTPKYQLEIDEYERLKEEK 401
+L WL++ +GTKV++ + +TG+ + K L D Y + ++K
Sbjct: 2756 FLEWLSNVRARTGTKVVHKVVFTGDPKPSLTWYINNKEILNSDLYTIVTDDK 2807
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 246 WLPWLTHYANTSGTKVLNAIDYTGESLANFFGITTPKYQLEIDEYERLKEEK 401
+L WL++ +GTKV++ + +TG+ + K L D Y + ++K
Sbjct: 2116 FLEWLSNVRARTGTKVVHKVVFTGDPKPSLTWYINNKEILNSDLYTIVTDDK 2167
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 246 WLPWLTHYANTSGTKVLNAIDYTGESLANFFGITTPKYQLEIDEYERLKEEK 401
+L WL++ +GTKV++ + +TG+ + K L D Y + ++K
Sbjct: 2756 FLEWLSNVRARTGTKVVHKVVFTGDPKPSLTWYINNKEILNSDLYTIVTDDK 2807
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 246 WLPWLTHYANTSGTKVLNAIDYTGESLANFFGITTPKYQLEIDEYERLKEEK 401
+L WL++ +GTKV++ + +TG+ + K L D Y + ++K
Sbjct: 2756 FLEWLSNVRARTGTKVVHKVVFTGDPKPSLTWYINNKEILNSDLYTIVTDDK 2807
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 246 WLPWLTHYANTSGTKVLNAIDYTGESLANFFGITTPKYQLEIDEYERLKEEK 401
+L WL++ +GTKV++ + +TG+ + K L D Y + ++K
Sbjct: 2116 FLEWLSNVRARTGTKVVHKVVFTGDPKPSLTWYINNKEILNSDLYTIVTDDK 2167
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 246 WLPWLTHYANTSGTKVLNAIDYTGESLANFFGITTPKYQLEIDEYERLKEEK 401
+L WL++ +GTKV++ + +TG+ + K L D Y + ++K
Sbjct: 2756 FLEWLSNVRARTGTKVVHKVVFTGDPKPSLTWYINNKEILNSDLYTIVTDDK 2807
>U29244-16|AAQ23126.1| 172|Caenorhabditis elegans Hypothetical
protein ZK1248.19 protein.
Length = 172
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 363 LEIDEYERLKEEKKKMEDESAGWVPKNSGGDIPLV 467
LE DEY L+E+ E V + GGD+ L+
Sbjct: 32 LEEDEYRELREDTVNQLQEYGKIVERLQGGDVSLI 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,565,493
Number of Sequences: 27780
Number of extensions: 251090
Number of successful extensions: 773
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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