Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28m02
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002748-1|AAH02748.2| 260|Homo sapiens transmembrane protein 7... 44 5e-04
AK000540-1|BAA91240.1| 161|Homo sapiens protein ( Homo sapiens ... 42 0.002
AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein. 38 0.033
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein. 36 0.13
U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein. 35 0.31
AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital... 35 0.31
L20470-1|AAA53684.1| 873|Homo sapiens very low density lipoprot... 34 0.54
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ... 33 0.72
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ... 33 0.72
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ... 33 0.72
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 33 0.72
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein. 33 0.72
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein. 33 0.72
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein. 33 0.72
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein. 33 0.72
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein. 33 0.72
S73849-1|AAB31735.1| 873|Homo sapiens very low density lipoprot... 33 0.95
L22431-1|AAA61344.1| 873|Homo sapiens very low density lipoprot... 33 0.95
D16532-1|BAA03969.1| 873|Homo sapiens very low density lipoprot... 33 0.95
D16494-1|BAA03946.1| 845|Homo sapiens very low density lipoprot... 33 0.95
D16493-1|BAA03945.1| 873|Homo sapiens very low density lipoprot... 33 0.95
DQ067198-1|AAY46157.1| 873|Homo sapiens very low density lipopr... 33 0.95
BC142653-1|AAI42654.1| 845|Homo sapiens very low density lipopr... 33 0.95
AL450467-4|CAH72453.1| 752|Homo sapiens very low density lipopr... 33 0.95
AL450467-3|CAH72455.1| 845|Homo sapiens very low density lipopr... 33 0.95
AL450467-2|CAH72454.1| 873|Homo sapiens very low density lipopr... 33 0.95
AK092381-1|BAC03874.1| 752|Homo sapiens protein ( Homo sapiens ... 33 0.95
AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein. 33 0.95
AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein. 33 0.95
AB208822-1|BAD92059.1| 555|Homo sapiens Very low-density lipopr... 33 0.95
X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein. 33 1.3
L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein. 33 1.3
AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein. 33 1.3
AK131282-1|BAD18457.1| 872|Homo sapiens protein ( Homo sapiens ... 32 2.2
BC126440-1|AAI26441.1| 321|Homo sapiens OIT3 protein protein. 31 3.8
BC008761-1|AAH08761.2| 743|Homo sapiens LTBP3 protein protein. 31 3.8
AY358339-1|AAQ88705.1| 545|Homo sapiens PPFL826 protein. 31 3.8
AY013707-1|AAG40096.2| 545|Homo sapiens LZP protein. 31 3.8
AL117551-1|CAB55988.1| 511|Homo sapiens hypothetical protein pr... 31 3.8
AK096435-1|BAC04788.1| 545|Homo sapiens protein ( Homo sapiens ... 31 3.8
AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein. 31 3.8
AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming gro... 31 3.8
X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 31 5.0
X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag... 31 5.0
M60675-1|AAA61295.1| 958|Homo sapiens von Willebrand factor pro... 31 5.0
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 31 5.0
M10321-1|AAB59512.1| 2074|Homo sapiens F8VWF protein. 31 5.0
AB208840-1|BAD92077.1| 830|Homo sapiens fibrillin 1 variant pro... 30 8.8
>BC002748-1|AAH02748.2| 260|Homo sapiens transmembrane protein 70
protein.
Length = 260
Score = 44.0 bits (99), Expect = 5e-04
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 444 FKVEDVFVPDVPGMFTTMHANGKPLFIEARFFNNPLHYAKIMGYDK-PMDFKLGETQESK 620
F DV +PD +FTT +A K L + F N Y +MGYDK + ET E K
Sbjct: 195 FHQNDVKIPDAKHVFTTFYAKTKSLLVNPVLFPNREDYIHLMGYDKEEFILYMEETSEEK 254
Query: 621 NQK 629
K
Sbjct: 255 RHK 257
>AK000540-1|BAA91240.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ20533 fis, clone KAT10931. ).
Length = 161
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 444 FKVEDVFVPDVPGMFTTMHANGKPLFIEARFFNNPLHYAKIMGYDK-PMDFKLGETQESK 620
F DV +PD +FTT +A K L + F N Y +MGYDK + E E K
Sbjct: 96 FHQNDVKIPDAKHVFTTFYAKTKSLLVNPVLFPNREDYIHLMGYDKEEFILYMEEASEEK 155
Query: 621 NQK 629
K
Sbjct: 156 RHK 158
>AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein.
Length = 1321
Score = 37.9 bits (84), Expect = 0.033
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +3
Query: 99 NDSCVDVCPDWMV-VQVSNCSESYWRARRTCEHPEEVLVGTICGFSRCDCPGTTVLDTET 275
N C ++CP +Q NC TC +P+ + RC CP TVLD T
Sbjct: 318 NWRCPELCPRTCTNMQHQNCGSP---CTDTCSNPQRAQLCKDHCVDRCFCPPGTVLDNIT 374
Query: 276 -GYCYDVDNCPTKHG 317
C + CP HG
Sbjct: 375 HSGCLPLGQCPCTHG 389
>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
Length = 2816
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L T C D+D C T G+ P YN +Y
Sbjct: 1591 GSFQCECPPGYHLSEHTRICEDIDECSTHSGICGPGTCYNTLGNY 1635
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 216 TICGFSRCDCPGTTVLDTETGYCYDVDNCPTKHG 317
T+ GF RC CP D G C DVD C + G
Sbjct: 2594 TLGGF-RCVCPSGFDFDQALGGCQDVDECAGRRG 2626
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 180 RTCEHPEEVLVGTICGFS---------RCDCPGTTVLDTETGYCYDVDNC 302
R C+ +E G +C F RC C G LD G C D++ C
Sbjct: 1407 RACQDVDECAQGNLCAFGSCENLPGMFRCICNGGYELDRGGGNCTDINEC 1456
>U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.
Length = 2911
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/87 (26%), Positives = 32/87 (36%)
Frame = +3
Query: 51 NASCYNKSTVFNCLWHNDSCVDVCPDWMVVQVSNCSESYWRARRTCEHPEEVLVGTICGF 230
N C N F C D+ + + CS+S C++ E G
Sbjct: 2461 NGQCINTMGSFRCFCKVGYTTDISGT-SCIDLDECSQSPKPCNYICKNTE--------GS 2511
Query: 231 SRCDCPGTTVLDTETGYCYDVDNCPTK 311
+C CP VL + C D+D C TK
Sbjct: 2512 YQCSCPRGYVLQEDGKTCKDLDECQTK 2538
Score = 33.5 bits (73), Expect = 0.72
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L +T C D+D C G+ P YN +Y
Sbjct: 1670 GSFQCECPQGYYLSEDTRICEDIDECFAHPGVCGPGTCYNTLGNY 1714
>AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital
contractural arachnodactyly) variant protein.
Length = 1976
Score = 34.7 bits (76), Expect = 0.31
Identities = 23/87 (26%), Positives = 32/87 (36%)
Frame = +3
Query: 51 NASCYNKSTVFNCLWHNDSCVDVCPDWMVVQVSNCSESYWRARRTCEHPEEVLVGTICGF 230
N C N F C D+ + + CS+S C++ E G
Sbjct: 1526 NGQCINTMGSFRCFCKVGYTTDISGT-SCIDLDECSQSPKPCNYICKNTE--------GS 1576
Query: 231 SRCDCPGTTVLDTETGYCYDVDNCPTK 311
+C CP VL + C D+D C TK
Sbjct: 1577 YQCSCPRGYVLQEDGKTCKDLDECQTK 1603
Score = 33.5 bits (73), Expect = 0.72
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L +T C D+D C G+ P YN +Y
Sbjct: 735 GSFQCECPQGYYLSEDTRICEDIDECFAHPGVCGPGTCYNTLGNY 779
>L20470-1|AAA53684.1| 873|Homo sapiens very low density lipoprotein
receptor protein.
Length = 873
Score = 33.9 bits (74), Expect = 0.54
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRAYQMDLATGVCKAVGKEPS 442
>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 3 protein.
Length = 2809
Score = 33.5 bits (73), Expect = 0.72
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L T C D+D C T + P YN +Y
Sbjct: 1584 GSFQCECPPGYHLSEHTRICEDIDECSTHSSICGPGTCYNTLGNY 1628
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 216 TICGFSRCDCPGTTVLDTETGYCYDVDNCPTKHG 317
T+ GF RC CP D G C DVD C + G
Sbjct: 2587 TLGGF-RCVCPSGFDFDQALGGCQDVDECAGRRG 2619
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 180 RTCEHPEEVLVGTICGFS---------RCDCPGTTVLDTETGYCYDVDNC 302
R C+ +E G +C F RC C G LD G C D++ C
Sbjct: 1400 RACQDVDECAQGNLCAFGSCENLPGMFRCICNGGYELDRGGGNCTDINEC 1449
>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 2 protein.
Length = 2809
Score = 33.5 bits (73), Expect = 0.72
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L T C D+D C T + P YN +Y
Sbjct: 1584 GSFQCECPPGYHLSEHTRICEDIDECSTHSSICGPGTCYNTLGNY 1628
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 216 TICGFSRCDCPGTTVLDTETGYCYDVDNCPTKHG 317
T+ GF RC CP D G C DVD C + G
Sbjct: 2587 TLGGF-RCVCPSGFDFDQALGGCQDVDECAGRRG 2619
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 180 RTCEHPEEVLVGTICGFS---------RCDCPGTTVLDTETGYCYDVDNC 302
R C+ +E G +C F RC C G LD G C D++ C
Sbjct: 1400 RACQDVDECAQGNLCAFGSCENLPGMFRCICNGGYELDRGGGNCTDINEC 1449
>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 1 protein.
Length = 2809
Score = 33.5 bits (73), Expect = 0.72
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L T C D+D C T + P YN +Y
Sbjct: 1584 GSFQCECPPGYHLSEHTRICEDIDECSTHSSICGPGTCYNTLGNY 1628
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 216 TICGFSRCDCPGTTVLDTETGYCYDVDNCPTKHG 317
T+ GF RC CP D G C DVD C + G
Sbjct: 2587 TLGGF-RCVCPSGFDFDQALGGCQDVDECAGRRG 2619
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 180 RTCEHPEEVLVGTICGFS---------RCDCPGTTVLDTETGYCYDVDNC 302
R C+ +E G +C F RC C G LD G C D++ C
Sbjct: 1400 RACQDVDECAQGNLCAFGSCENLPGMFRCICNGGYELDRGGGNCTDINEC 1449
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 33.5 bits (73), Expect = 0.72
Identities = 29/86 (33%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Frame = +3
Query: 93 WHNDSC---VDVCPDWMVVQ--VSNCSESYWRARRTCEHPEEVLVGTICGFSRCDCPGTT 257
W + C + CP M VS C + R E VG I C CP T
Sbjct: 692 WRDGVCTKPMTTCPKSMTYHYHVSTCQPT---CRSLSEGDITCSVGFI-PVDGCICPKGT 747
Query: 258 VLDTETGYCYDVDNCPTKH-GL*VPN 332
LD +TG C NCP H G +PN
Sbjct: 748 FLD-DTGKCVQASNCPCYHRGSMIPN 772
>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
Length = 1373
Score = 33.5 bits (73), Expect = 0.72
Identities = 29/86 (33%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Frame = +3
Query: 93 WHNDSC---VDVCPDWMVVQ--VSNCSESYWRARRTCEHPEEVLVGTICGFSRCDCPGTT 257
W + C + CP M VS C + R E VG I C CP T
Sbjct: 694 WRDGVCTKPMTTCPKSMTYHYHVSTCQPT---CRSLSEGDITCSVGFI-PVDGCICPKGT 749
Query: 258 VLDTETGYCYDVDNCPTKH-GL*VPN 332
LD +TG C NCP H G +PN
Sbjct: 750 FLD-DTGKCVQASNCPCYHRGSMIPN 774
>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 33.5 bits (73), Expect = 0.72
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L T C D+D C T + P YN +Y
Sbjct: 1584 GSFQCECPPGYHLSEHTRICEDIDECSTHSSICGPGTCYNTLGNY 1628
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 216 TICGFSRCDCPGTTVLDTETGYCYDVDNCPTKHG 317
T+ GF RC CP D G C DVD C + G
Sbjct: 2587 TLGGF-RCVCPSGFDFDQALGGCQDVDECAGRRG 2619
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 180 RTCEHPEEVLVGTICGFS---------RCDCPGTTVLDTETGYCYDVDNC 302
R C+ +E G +C F RC C G LD G C D++ C
Sbjct: 1400 RACQDVDECAQGNLCAFGSCENLPGMFRCICNGGYELDRGGGNCTDINEC 1449
>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 33.5 bits (73), Expect = 0.72
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L T C D+D C T + P YN +Y
Sbjct: 1584 GSFQCECPPGYHLSEHTRICEDIDECSTHSSICGPGTCYNTLGNY 1628
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 216 TICGFSRCDCPGTTVLDTETGYCYDVDNCPTKHG 317
T+ GF RC CP D G C DVD C + G
Sbjct: 2587 TLGGF-RCVCPSGFDFDQALGGCQDVDECAGRRG 2619
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 180 RTCEHPEEVLVGTICGFS---------RCDCPGTTVLDTETGYCYDVDNC 302
R C+ +E G +C F RC C G LD G C D++ C
Sbjct: 1400 RACQDVDECAQGNLCAFGSCENLPGMFRCICNGGYELDRGGGNCTDINEC 1449
>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 33.5 bits (73), Expect = 0.72
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L T C D+D C T + P YN +Y
Sbjct: 1584 GSFQCECPPGYHLSEHTRICEDIDECSTHSSICGPGTCYNTLGNY 1628
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 216 TICGFSRCDCPGTTVLDTETGYCYDVDNCPTKHG 317
T+ GF RC CP D G C DVD C + G
Sbjct: 2587 TLGGF-RCVCPSGFDFDQALGGCQDVDECAGRRG 2619
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 180 RTCEHPEEVLVGTICGFS---------RCDCPGTTVLDTETGYCYDVDNC 302
R C+ +E G +C F RC C G LD G C D++ C
Sbjct: 1400 RACQDVDECAQGNLCAFGSCENLPGMFRCICNGGYELDRGGGNCTDINEC 1449
>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 33.5 bits (73), Expect = 0.72
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C+CP L T C D+D C T + P YN +Y
Sbjct: 1584 GSFQCECPPGYHLSEHTRICEDIDECSTHSSICGPGTCYNTLGNY 1628
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 216 TICGFSRCDCPGTTVLDTETGYCYDVDNCPTKHG 317
T+ GF RC CP D G C DVD C + G
Sbjct: 2587 TLGGF-RCVCPSGFDFDQALGGCQDVDECAGRRG 2619
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +3
Query: 180 RTCEHPEEVLVGTICGFS---------RCDCPGTTVLDTETGYCYDVDNC 302
R C+ +E G +C F RC C G LD G C D++ C
Sbjct: 1400 RACQDVDECAQGNLCAFGSCENLPGMFRCICNGGYELDRGGGNCTDINEC 1449
>S73849-1|AAB31735.1| 873|Homo sapiens very low density lipoprotein
receptor protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRGYQMDLATGVCKAVGKEPS 442
>L22431-1|AAA61344.1| 873|Homo sapiens very low density lipoprotein
receptor protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRGYQMDLATGVCKAVGKEPS 442
>D16532-1|BAA03969.1| 873|Homo sapiens very low density lipoprotein
receptor protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRGYQMDLATGVCKAVGKEPS 442
>D16494-1|BAA03946.1| 845|Homo sapiens very low density lipoprotein
receptor protein.
Length = 845
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRGYQMDLATGVCKAVGKEPS 442
>D16493-1|BAA03945.1| 873|Homo sapiens very low density lipoprotein
receptor protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRGYQMDLATGVCKAVGKEPS 442
>DQ067198-1|AAY46157.1| 873|Homo sapiens very low density
lipoprotein receptor protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRGYQMDLATGVCKAVGKEPS 442
>BC142653-1|AAI42654.1| 845|Homo sapiens very low density
lipoprotein receptor protein.
Length = 845
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRGYQMDLATGVCKAVGKEPS 442
>AL450467-4|CAH72453.1| 752|Homo sapiens very low density
lipoprotein receptor protein.
Length = 752
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 239 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 298
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 299 ECSRGYQMDLATGVCKAVGKEPS 321
>AL450467-3|CAH72455.1| 845|Homo sapiens very low density
lipoprotein receptor protein.
Length = 845
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRGYQMDLATGVCKAVGKEPS 442
>AL450467-2|CAH72454.1| 873|Homo sapiens very low density
lipoprotein receptor protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 360 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 419
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 420 ECSRGYQMDLATGVCKAVGKEPS 442
>AK092381-1|BAC03874.1| 752|Homo sapiens protein ( Homo sapiens
cDNA FLJ35062 fis, clone OCBBF2019195, highly similar to
VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR. ).
Length = 752
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 239 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 298
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 299 ECSRGYQMDLATGVCKAVGKEPS 321
>AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.
Length = 1283
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +3
Query: 99 NDSCVDVCPDWMVVQVSNCSESYWRARRTCEHPEEVLVGTICGFSRCDCPGTTVLD--TE 272
N C ++CP + + + E TC +P+ + C CP TVLD T
Sbjct: 279 NWRCPELCPRTCPLNMQH-QECGSPCTDTCSNPQRAQLCEDHCVDGCFCPPGTVLDDITH 337
Query: 273 TGYCYDVDNCPTKHG 317
+G C + CP HG
Sbjct: 338 SG-CLPLGQCPCTHG 351
>AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.
Length = 1104
Score = 33.1 bits (72), Expect = 0.95
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 237 CDCPGTTVLDTETGYCYDVDNCPTKH-GL*VPN 332
C CP T LD +TG C NCP H G +PN
Sbjct: 741 CICPKGTFLD-DTGKCVQASNCPCYHRGSMIPN 772
>AB208822-1|BAD92059.1| 555|Homo sapiens Very low-density
lipoprotein receptor precursor variant protein.
Length = 555
Score = 33.1 bits (72), Expect = 0.95
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Frame = +3
Query: 87 CLWHNDSCVDVCPDWMVVQVSNCSESYWRA-RRTCEHPEEVLVGTIC--------GFSRC 239
CL +N C +C D ++ +C+ + R+TC +E IC G +C
Sbjct: 417 CLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKC 476
Query: 240 DCPGTTVLDTETGYCYDVDNCPT 308
+C +D TG C V P+
Sbjct: 477 ECSRGYQMDLATGVCKAVGKEPS 499
>X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.
Length = 3002
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/87 (22%), Positives = 35/87 (40%)
Frame = +3
Query: 51 NASCYNKSTVFNCLWHNDSCVDVCPDWMVVQVSNCSESYWRARRTCEHPEEVLVGTICGF 230
N C N ++C+ D+ V ++ C+++ C++ E G
Sbjct: 2546 NGECVNDRGSYHCICKTGYTPDITGT-SCVDLNECNQAPKPCNFICKNTE--------GS 2596
Query: 231 SRCDCPGTTVLDTETGYCYDVDNCPTK 311
+C CP +L + C D+D C TK
Sbjct: 2597 YQCSCPKGYILQEDGRSCKDLDECATK 2623
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C CP L+ +T C DV+ C T G+ P YN +Y
Sbjct: 1758 GSFQCRCPTGYYLNEDTRVCDDVNECETP-GICGPGTCYNTVGNY 1801
>L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.
Length = 2871
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/87 (22%), Positives = 35/87 (40%)
Frame = +3
Query: 51 NASCYNKSTVFNCLWHNDSCVDVCPDWMVVQVSNCSESYWRARRTCEHPEEVLVGTICGF 230
N C N ++C+ D+ V ++ C+++ C++ E G
Sbjct: 2415 NGECVNDRGSYHCICKTGYTPDITGT-SCVDLNECNQAPKPCNFICKNTE--------GS 2465
Query: 231 SRCDCPGTTVLDTETGYCYDVDNCPTK 311
+C CP +L + C D+D C TK
Sbjct: 2466 YQCSCPKGYILQEDGRSCKDLDECATK 2492
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C CP L+ +T C DV+ C T G+ P YN +Y
Sbjct: 1627 GSFQCRCPTGYYLNEDTRVCDDVNECETP-GICGPGTCYNTVGNY 1670
>AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.
Length = 2871
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/87 (22%), Positives = 35/87 (40%)
Frame = +3
Query: 51 NASCYNKSTVFNCLWHNDSCVDVCPDWMVVQVSNCSESYWRARRTCEHPEEVLVGTICGF 230
N C N ++C+ D+ V ++ C+++ C++ E G
Sbjct: 2415 NGECVNDRGSYHCICKTGYTPDITGT-SCVDLNECNQAPKPCNFICKNTE--------GS 2465
Query: 231 SRCDCPGTTVLDTETGYCYDVDNCPTK 311
+C CP +L + C D+D C TK
Sbjct: 2466 YQCSCPKGYILQEDGRSCKDLDECATK 2492
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C CP L+ +T C DV+ C T G+ P YN +Y
Sbjct: 1627 GSFQCRCPTGYYLNEDTRVCDDVNECETP-GICGPGTCYNTVGNY 1670
>AK131282-1|BAD18457.1| 872|Homo sapiens protein ( Homo sapiens
cDNA FLJ16233 fis, clone FEBRA2028256, moderately
similar to FIBRILLIN 2 PRECURSOR. ).
Length = 872
Score = 31.9 bits (69), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +3
Query: 216 TICGFSRCDCPGTTVLDTETGYCYDVDNCPTKHG 317
T+ GF RC CP D G C DVD C + G
Sbjct: 650 TLGGF-RCVCPSGFDFDQALGGCQDVDECAGRRG 682
>BC126440-1|AAI26441.1| 321|Homo sapiens OIT3 protein protein.
Length = 321
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +3
Query: 87 CLWHNDSCVDVCPD----WMVVQVSNCSESYWRARRTCEHPEEVLVGTICGFSRCDCPGT 254
CLW+ V CP + + + S C Y + +E G+ S C C
Sbjct: 113 CLWNTTVEVKACPGGYYVYRLTKPSVCFHVY--CGHFYDICDEDCHGSCSDTSECTCAPG 170
Query: 255 TVLDTETGYCYDVDNCPTKHG 317
TVL + C+D + C +G
Sbjct: 171 TVLGPDRQTCFDENECEQNNG 191
>BC008761-1|AAH08761.2| 743|Homo sapiens LTBP3 protein protein.
Length = 743
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNC 302
G + C+CPG LD C D+D C
Sbjct: 673 GGAVCECPGGFQLDASRARCVDIDEC 698
>AY358339-1|AAQ88705.1| 545|Homo sapiens PPFL826 protein.
Length = 545
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +3
Query: 87 CLWHNDSCVDVCPD----WMVVQVSNCSESYWRARRTCEHPEEVLVGTICGFSRCDCPGT 254
CLW+ V CP + + + S C Y + +E G+ S C C
Sbjct: 113 CLWNTTVEVKACPGGYYVYRLTKPSVCFHVY--CGHFYDICDEDCHGSCSDTSECTCAPG 170
Query: 255 TVLDTETGYCYDVDNCPTKHG 317
TVL + C+D + C +G
Sbjct: 171 TVLGPDRQTCFDENECEQNNG 191
>AY013707-1|AAG40096.2| 545|Homo sapiens LZP protein.
Length = 545
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +3
Query: 87 CLWHNDSCVDVCPD----WMVVQVSNCSESYWRARRTCEHPEEVLVGTICGFSRCDCPGT 254
CLW+ V CP + + + S C Y + +E G+ S C C
Sbjct: 113 CLWNTTVEVKACPGGYYVYRLTKPSVCFHVY--CGHFYDICDEDCHGSCSDTSECTCAPG 170
Query: 255 TVLDTETGYCYDVDNCPTKHG 317
TVL + C+D + C +G
Sbjct: 171 TVLGPDRQTCFDENECEQNNG 191
>AL117551-1|CAB55988.1| 511|Homo sapiens hypothetical protein
protein.
Length = 511
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNC 302
G + C+CPG LD C D+D C
Sbjct: 441 GGAVCECPGGFQLDASRARCVDIDEC 466
>AK096435-1|BAC04788.1| 545|Homo sapiens protein ( Homo sapiens
cDNA FLJ39116 fis, clone NTONG2006301, highly similar to
Mus musculus EF-9 mRNA. ).
Length = 545
Score = 31.1 bits (67), Expect = 3.8
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +3
Query: 87 CLWHNDSCVDVCPD----WMVVQVSNCSESYWRARRTCEHPEEVLVGTICGFSRCDCPGT 254
CLW+ V CP + + + S C Y + +E G+ S C C
Sbjct: 113 CLWNTTVEVKACPGGYYVYRLTKPSVCFHVY--CGHFYDICDEDCHGSCSDTSECTCAPG 170
Query: 255 TVLDTETGYCYDVDNCPTKHG 317
TVL + C+D + C +G
Sbjct: 171 TVLGPDRQTCFDENECEQNNG 191
>AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein.
Length = 1382
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNC 302
G + C+CPG LD C D+D C
Sbjct: 1312 GGAVCECPGGFQLDASRARCVDIDEC 1337
>AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming growth
factor beta binding protein 3 protein.
Length = 1256
Score = 31.1 bits (67), Expect = 3.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNC 302
G + C+CPG LD C D+D C
Sbjct: 1186 GGAVCECPGGFQLDASRARCVDIDEC 1211
>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
pre-pro-von Willebrand factor. ).
Length = 2813
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 183 TCEHPEEVLVGTICGFS-RCDCPGTTVLDTETGYCYDVDNCP 305
TC+HPE + C CP +LD C D ++CP
Sbjct: 1156 TCQHPEPLACPVQCVEGCHAHCPPGKILDELLQTCVDPEDCP 1197
>X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA fragment
(5'terminus) for von Willebrand factor (vWF). ).
Length = 1400
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 183 TCEHPEEVLVGTICGFS-RCDCPGTTVLDTETGYCYDVDNCP 305
TC+HPE + C CP +LD C D ++CP
Sbjct: 1156 TCQHPEPLACPVQCVEGCHAHCPPGKILDELLQTCVDPEDCP 1197
>M60675-1|AAA61295.1| 958|Homo sapiens von Willebrand factor
protein.
Length = 958
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 183 TCEHPEEVLVGTICGFS-RCDCPGTTVLDTETGYCYDVDNCP 305
TC+HPE + C CP +LD C D ++CP
Sbjct: 167 TCQHPEPLACPVQCVEGCHAHCPPGKILDELLQTCVDPEDCP 208
>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor protein.
Length = 2813
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 183 TCEHPEEVLVGTICGFS-RCDCPGTTVLDTETGYCYDVDNCP 305
TC+HPE + C CP +LD C D ++CP
Sbjct: 1156 TCQHPEPLACPVQCVEGCHAHCPPGKILDELLQTCVDPEDCP 1197
>M10321-1|AAB59512.1| 2074|Homo sapiens F8VWF protein.
Length = 2074
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 183 TCEHPEEVLVGTICGFS-RCDCPGTTVLDTETGYCYDVDNCP 305
TC+HPE + C CP +LD C D ++CP
Sbjct: 417 TCQHPEPLACPVQCVEGCHAHCPPGKILDELLQTCVDPEDCP 458
>AB208840-1|BAD92077.1| 830|Homo sapiens fibrillin 1 variant
protein.
Length = 830
Score = 29.9 bits (64), Expect = 8.8
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 225 GFSRCDCPGTTVLDTETGYCYDVDNCPTKHGL*VPNHSYNGFLSY 359
G +C CP L+ +T C DV+ C T G+ P YN +Y
Sbjct: 62 GSFQCRCPTGYYLNEDTRVCDDVNECETP-GICGPGTCYNTVGNY 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,083,371
Number of Sequences: 237096
Number of extensions: 2542037
Number of successful extensions: 5746
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 5034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5716
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -