Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28l22
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 36 0.027
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 36 0.036
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 36 0.036
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 33 0.26
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 33 0.26
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 33 0.26
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 33 0.26
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 32 0.34
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 32 0.34
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 32 0.34
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 31 0.78
U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 31 1.0
D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 31 1.0
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 30 1.4
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 30 1.4
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 30 1.4
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 30 1.8
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 30 1.8
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68337-8|CAA92749.2| 241|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.4
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 29 2.4
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 2.4
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 29 2.4
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.2
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 3.2
U58763-2|AAK68876.1| 673|Caenorhabditis elegans Metaphase-to-an... 29 3.2
U29378-4|AAA68727.2| 667|Caenorhabditis elegans Temporarily ass... 29 3.2
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 29 3.2
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 29 4.2
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 29 4.2
AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of el... 29 4.2
AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of el... 29 4.2
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 28 5.5
U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 28 5.5
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 5.5
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 28 5.5
AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical ... 28 5.5
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 28 7.3
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 28 7.3
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 28 7.3
Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical p... 27 9.6
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z72512-3|CAA96665.2| 310|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical pr... 27 9.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 9.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 9.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 9.6
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 27 9.6
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 27 9.6
AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical ... 27 9.6
AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm rece... 27 9.6
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +1
Query: 205 CAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSNE 384
C C R + + C C++ YH KC S D W C C+ K+ NE
Sbjct: 1115 CRSCRRKAAAHDLVLCSECDNCYHLKCAKLDVNS-----DAPADWMCTSCRAQQRKVENE 1169
Query: 385 VQ 390
+
Sbjct: 1170 AK 1171
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 35.5 bits (78), Expect = 0.036
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 211 YCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSNE-- 384
YC + E + C C YHT C++E + EG W CA C + ++ E
Sbjct: 258 YCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEG-----DWSCAHCIEHGPEVVKEEP 312
Query: 385 -VQNSKEINI-ENTLNLL 432
QN + I + T NLL
Sbjct: 313 AKQNDEFCKICKETENLL 330
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 35.5 bits (78), Expect = 0.036
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 211 YCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSNE-- 384
YC + E + C C YHT C++E + EG W CA C + ++ E
Sbjct: 258 YCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEG-----DWSCAHCIEHGPEVVKEEP 312
Query: 385 -VQNSKEINI-ENTLNLL 432
QN + I + T NLL
Sbjct: 313 AKQNDEFCKICKETENLL 330
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +1
Query: 205 CAYCHRTLRHA-ESIKCCFCESKYHTKCMNE--TAKSICEGGDRG 330
C C ++ E++KC C+ KYHT C + K IC D G
Sbjct: 519 CLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICPTCDAG 563
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 32.7 bits (71), Expect = 0.26
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Frame = +1
Query: 340 KCAVCQKSATKLSNE---VQNSKEI-NIENTLNL---LSEKFELVNKIQLPKLHNELAHV 498
K ++ ++L NE V SK+ NIE+ L L +K +++ ++ +E +HV
Sbjct: 249 KIVFLEERVSQLENEAEKVNESKKAGNIEDIAALGSVLVQKDDVIQQLTNDIKRHEASHV 308
Query: 499 ------KLVTERIDKQNEQILHEIDEIKTKL---NGIRTVKHNKHRYRNAHFEDRVSNRL 651
KL ++K+N+ ++ E++E+K +L N +K+ R F D
Sbjct: 309 EELAKWKLAVSAVEKKNKTLIGELNELKNQLESRNDYEAIKNELRLLREIEFGDSAEANA 368
Query: 652 DDNDHL 669
+ + L
Sbjct: 369 ESIERL 374
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 32.7 bits (71), Expect = 0.26
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Frame = +1
Query: 340 KCAVCQKSATKLSNE---VQNSKEI-NIENTLNL---LSEKFELVNKIQLPKLHNELAHV 498
K ++ ++L NE V SK+ NIE+ L L +K +++ ++ +E +HV
Sbjct: 249 KIVFLEERVSQLENEAEKVNESKKAGNIEDIAALGSVLVQKDDVIQQLTNDIKRHEASHV 308
Query: 499 ------KLVTERIDKQNEQILHEIDEIKTKL---NGIRTVKHNKHRYRNAHFEDRVSNRL 651
KL ++K+N+ ++ E++E+K +L N +K+ R F D
Sbjct: 309 EELAKWKLAVSAVEKKNKTLIGELNELKNQLESRNDYEAIKNELRLLREIEFGDSAEANA 368
Query: 652 DDNDHL 669
+ + L
Sbjct: 369 ESIERL 374
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 32.7 bits (71), Expect = 0.26
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Frame = +1
Query: 340 KCAVCQKSATKLSNE---VQNSKEI-NIENTLNL---LSEKFELVNKIQLPKLHNELAHV 498
K ++ ++L NE V SK+ NIE+ L L +K +++ ++ +E +HV
Sbjct: 249 KIVFLEERVSQLENEAEKVNESKKAGNIEDIAALGSVLVQKDDVIQQLTNDIKRHEASHV 308
Query: 499 ------KLVTERIDKQNEQILHEIDEIKTKL---NGIRTVKHNKHRYRNAHFEDRVSNRL 651
KL ++K+N+ ++ E++E+K +L N +K+ R F D
Sbjct: 309 EELAKWKLAVSAVEKKNKTLIGELNELKNQLESRNDYEAIKNELRLLREIEFGDSAEANA 368
Query: 652 DDNDHL 669
+ + L
Sbjct: 369 ESIERL 374
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 32.3 bits (70), Expect = 0.34
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 370 KLSNEVQNSKEIN--IENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQIL 543
+L+ E++ SKE N +E+ L+ +K E + K L K ELA K T+R+ +Q +
Sbjct: 509 ELAVELRMSKEYNSEMESELSKFRDKCEQL-KEDLRKKSGELAQEKNETQRVFQQKKDAD 567
Query: 544 HEIDEIKTKLNGIRTVKHNKHRYRNAHFEDRVSN 645
EIK ++T ++ K ++R N
Sbjct: 568 EAFAEIKRDYELLQTRENEKSVQLKKALDERKEN 601
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 32.3 bits (70), Expect = 0.34
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 370 KLSNEVQNSKEIN--IENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQIL 543
+L+ E++ SKE N +E+ L+ +K E + K L K ELA K T+R+ +Q +
Sbjct: 509 ELAVELRMSKEYNSEMESELSKFRDKCEQL-KEDLRKKSGELAQEKNETQRVFQQKKDAD 567
Query: 544 HEIDEIKTKLNGIRTVKHNKHRYRNAHFEDRVSN 645
EIK ++T ++ K ++R N
Sbjct: 568 EAFAEIKRDYELLQTRENEKSVQLKKALDERKEN 601
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/85 (18%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 397 KEINIENTLNLLSEKFELVNKIQ--LPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTK 570
++ N E + K + + ++Q L +N++ +++ + + K+N+Q+L EI E+ TK
Sbjct: 81 RQANQEREVRYEKFKVDTIEELQNELQDQNNQIDKLRIDRQELVKENDQLLEEIAEMSTK 140
Query: 571 LNGIRTVKHNKHRYRNAHFEDRVSN 645
++ + + K ++ ++ +
Sbjct: 141 MDDYKRKEKAKEVEMRMKYDQKLKD 165
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/66 (19%), Positives = 26/66 (39%)
Frame = +1
Query: 205 CAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSNE 384
C C ++ + +C C YH C++ + + + G W C C +S+
Sbjct: 529 CVVCRKSTEQHKQTQCDECHKSYHIGCLSPPLTRLPKRNNFG--WICHECNESSDSEQEI 586
Query: 385 VQNSKE 402
+ + E
Sbjct: 587 IPEASE 592
>U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical
protein C03G5.1 protein.
Length = 646
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 466 LPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTKLNGIRTV--KHNKHRYRNAHFEDRV 639
L KL+ + AH+ + + + N ++ ++ +N +T+ N+ R AH D
Sbjct: 521 LSKLYKDQAHLNVADKGL-VWNSDLIETLELQNLLINATQTIVAAENREESRGAHARDDF 579
Query: 640 SNRLDDNDHLQMVNNTEK 693
+RLD+ D+ + + K
Sbjct: 580 PDRLDELDYSKPLEGQTK 597
>D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein
subunit of complex II protein.
Length = 646
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 466 LPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTKLNGIRTV--KHNKHRYRNAHFEDRV 639
L KL+ + AH+ + + + N ++ ++ +N +T+ N+ R AH D
Sbjct: 521 LSKLYKDQAHLNVADKGL-VWNSDLIETLELQNLLINATQTIVAAENREESRGAHARDDF 579
Query: 640 SNRLDDNDHLQMVNNTEK 693
+RLD+ D+ + + K
Sbjct: 580 PDRLDELDYSKPLEGQTK 597
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1
Query: 373 LSNEVQNSKEINIENTLNLLSE-KFELVNKIQLPKLHNELAH-VKLVTERIDKQNEQILH 546
L+N + + N + + + E + E ++ + + EL + + ER+D+QN+Q+
Sbjct: 1107 LANRLTRQSKENAQRIIEIEDELEHERQSRSKADRARAELQRELDELNERLDEQNKQLEI 1166
Query: 547 EIDEIKTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNT 687
+ D K K + I + + A+ + R +ND + + NT
Sbjct: 1167 QQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNT 1213
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1
Query: 373 LSNEVQNSKEINIENTLNLLSE-KFELVNKIQLPKLHNELAH-VKLVTERIDKQNEQILH 546
L+N + + N + + + E + E ++ + + EL + + ER+D+QN+Q+
Sbjct: 1107 LANRLTRQSKENAQRIIEIEDELEHERQSRSKADRARAELQRELDELNERLDEQNKQLEI 1166
Query: 547 EIDEIKTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNT 687
+ D K K + I + + A+ + R +ND + + NT
Sbjct: 1167 QQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNT 1213
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +1
Query: 373 LSNEVQNSKEINIENTLNLLSE-KFELVNKIQLPKLHNELAH-VKLVTERIDKQNEQILH 546
L+N + + N + + + E + E ++ + + EL + + ER+D+QN+Q+
Sbjct: 1107 LANRLTRQSKENAQRIIEIEDELEHERQSRSKADRARAELQRELDELNERLDEQNKQLEI 1166
Query: 547 EIDEIKTKLNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNT 687
+ D K K + I + + A+ + R +ND + + NT
Sbjct: 1167 QQDNNKKKDSEIIKFRRDLDEKNMANEDQMAMIRRKNNDQISALTNT 1213
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 367 TKLSNEVQNSKEINIENTLNLLS--EKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQI 540
T LS E++N + +N+E LLS + E + KI+ K+ E ++ E + ++NE I
Sbjct: 160 TSLSEELENCQTLNVELEDRLLSITSESEAILKIK-EKVVEENLRIRKEIEELRRENEGI 218
Query: 541 LHEIDE 558
++ E
Sbjct: 219 AEKMKE 224
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 340 KCAVCQKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERI 519
K A +K ATK NE++ ++ +EN L L K + +K + K+ K+ E++
Sbjct: 456 KLAESEKKATKYKNELKEHADL-VEN-LTLQLNKLQENSKDLMEKISAGEGGAKMAIEQL 513
Query: 520 DKQNEQILHEIDEIKTK 570
+++ ++ +E+ K
Sbjct: 514 EQEKVKLTNELQTSSEK 530
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 340 KCAVCQKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERI 519
K A +K ATK NE++ ++ +EN L L K + +K + K+ K+ E++
Sbjct: 458 KLAESEKKATKYKNELKEHADL-VEN-LTLQLNKLQENSKDLMEKISAGEGGAKMAIEQL 515
Query: 520 DKQNEQILHEIDEIKTK 570
+++ ++ +E+ K
Sbjct: 516 EQEKVKLTNELQTSSEK 532
>U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical
protein R08E3.4b protein.
Length = 480
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 238 ESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVC 354
E+++CC C ++ M KS+ GD +KCA+C
Sbjct: 418 ENVECCHCGMMFYDNTMYLLHKSLHSDGD---PFKCALC 453
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 340 KCAVCQKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERI 519
K A +K ATK NE++ ++ +EN L L K + +K + K+ K+ E++
Sbjct: 458 KLAESEKKATKYKNELKEHADL-VEN-LTLQLNKLQENSKDLMEKISAGEGGAKMAIEQL 515
Query: 520 DKQNEQILHEIDEIKTK 570
+++ ++ +E+ K
Sbjct: 516 EQEKVKLTNELQTSSEK 532
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 205 CAYCHRTL-RHAESIKCCFCESKYHTKCMNE--TAKSIC 312
C C + ++ +++KC C+ +YHT C+ + K IC
Sbjct: 900 CLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRIC 938
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 202 VCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSN 381
VC C A + C C+ YH CM I +G R QW C+ C++ K ++
Sbjct: 565 VCEGCGTGGDEANLLLCDECDVSYHIYCMKPLLDKIPQGPWR-CQW-CSRCRRCNHKAAS 622
>Z81536-9|CAB04362.1| 733|Caenorhabditis elegans Hypothetical
protein F40D4.12 protein.
Length = 733
Score = 29.5 bits (63), Expect = 2.4
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Frame = +1
Query: 295 TAKSICEGGDRG-YQWKCAVCQKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLP 471
T +S+ +G + Y + + Q +LSNE N +I + L +L L N +Q
Sbjct: 247 TCRSLFDGVECDIYDTEIVIQQMKCFRLSNEYNNDDKIG--SGLQVLMTDLILRNILQHV 304
Query: 472 KLHNELAHVKL---VTERIDKQNEQILHEIDEIKTK------LNGIRTVKHNKHRYRNAH 624
L LA ++ V ID+ + E+ I+ + + + KHNKH Y+ AH
Sbjct: 305 GLTTILALRRVSWGVLNCIDRIKPDLKIEVLVIQMRSIDFLIIEVLDESKHNKHSYQTAH 364
Query: 625 FE 630
E
Sbjct: 365 NE 366
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 202 VCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSN 381
VC C A + C C+ YH CM I +G R QW C+ C++ K ++
Sbjct: 565 VCEGCGTGGDEANLLLCDECDVSYHIYCMKPLLDKIPQGPWR-CQW-CSRCRRCNHKAAS 622
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +1
Query: 232 HAESIKCCFCESKYHTKCMNETAKSICEGG-DRGYQWKCAVCQKSATK 372
H ++CC C + C + +C+ R Y +CA C K
Sbjct: 89 HQSCLRCCDCRAPMSMTCFSRDGLILCKTDFSRRYSQRCAGCDGKLEK 136
>Z68337-8|CAA92749.2| 241|Caenorhabditis elegans Hypothetical
protein M7.12 protein.
Length = 241
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 355 QKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNE 534
Q A+K N + + + ++++E L N+I L K E L++ RID +
Sbjct: 162 QGLASKFMNWTEKKELLKSVEASSIVAEASSLANQILLSKRGYETVASTLLSSRIDVNGK 221
Query: 535 QIL 543
QIL
Sbjct: 222 QIL 224
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +1
Query: 211 YCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVC 354
YC + + C C S YH C++ I EG +W C C
Sbjct: 330 YCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEG-----EWSCPRC 372
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +1
Query: 211 YCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVC 354
YC + + C C S YH C++ I EG +W C C
Sbjct: 330 YCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEG-----EWSCPRC 372
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +1
Query: 232 HAESIKCCFCESKYHTKCMNETAKSICEGG-DRGYQWKCAVCQKSATK 372
H ++CC C + C + +C+ R Y +CA C K
Sbjct: 66 HQSCLRCCDCRAPMSMTCFSRDGLILCKTDFSRRYSQRCAGCDGKLEK 113
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +1
Query: 211 YCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVC 354
YC + + C C S YH C++ I EG +W C C
Sbjct: 330 YCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEG-----EWSCPRC 372
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 29.5 bits (63), Expect = 2.4
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Frame = +1
Query: 373 LSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVK-----LVTER--IDKQN 531
L+ E QNS+ +E L L+E+ + +N ++ +L N +A V E + ++
Sbjct: 182 LAAEKQNSEREKME--LKKLTEELQRMN-LENKELKNRVASENSRATGAVQEAQVLQEKL 238
Query: 532 EQILHEIDEIKTKLNGIRTVKHNKHRYRNAHFEDRVSNR 648
+Q L +DE TKL T + N H+ R FED R
Sbjct: 239 QQALKALDEKTTKL----TTQENAHKLRMDQFEDDTKKR 273
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/68 (23%), Positives = 23/68 (33%)
Frame = +1
Query: 151 FICMCIKYQSIFNMNQMVCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRG 330
F +K F + C C + +I+C FC +H C K G+
Sbjct: 129 FATNILKLNKWFCPRCVECDSCKGYIGDPSNIECTFCCRAWHGSC---APKGYSPSGEFD 185
Query: 331 YQWKCAVC 354
W C C
Sbjct: 186 SDWYCIAC 193
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/105 (19%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Frame = +1
Query: 367 TKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILH 546
+KL ++ S ++ E+ +N+L +K ++ +++ ++ +ID++ +++ H
Sbjct: 99 SKLRKLLEES-QLESEDAMNVLRKK----HQDSCLDYQDQIEQLQKKNAKIDRERQRVQH 153
Query: 547 EIDEIKTKLNGIRTVKHNKHRYRNAHFE---DRVSNRLDD-NDHL 669
E+ E+ ++ ++ KH + FE + ++N+++D N H+
Sbjct: 154 EVIELTATIDQLQKDKHTAEKAAE-RFEAQANELANKVEDLNKHV 197
>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical
protein C44B9.4 protein.
Length = 1150
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 202 VCAYCHRTLRHAESIKCCFCESKYHTKCM 288
VCA C+ +KC FC+ +H KC+
Sbjct: 220 VCAECNLKDDWTRMLKCDFCDLIWHQKCV 248
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/105 (19%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Frame = +1
Query: 367 TKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILH 546
+KL ++ S ++ E+ +N+L +K ++ +++ ++ +ID++ +++ H
Sbjct: 99 SKLRKLLEES-QLESEDAMNVLRKK----HQDSCLDYQDQIEQLQKKNAKIDRERQRVQH 153
Query: 547 EIDEIKTKLNGIRTVKHNKHRYRNAHFE---DRVSNRLDD-NDHL 669
E+ E+ ++ ++ KH + FE + ++N+++D N H+
Sbjct: 154 EVIELTATIDQLQKDKHTAEKAAE-RFEAQANELANKVEDLNKHV 197
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/105 (19%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Frame = +1
Query: 367 TKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILH 546
+KL ++ S ++ E+ +N+L +K ++ +++ ++ +ID++ +++ H
Sbjct: 115 SKLRKLLEES-QLESEDAMNVLRKK----HQDSCLDYQDQIEQLQKKNAKIDRERQRVQH 169
Query: 547 EIDEIKTKLNGIRTVKHNKHRYRNAHFE---DRVSNRLDD-NDHL 669
E+ E+ ++ ++ KH + FE + ++N+++D N H+
Sbjct: 170 EVIELTATIDQLQKDKHTAEKAAE-RFEAQANELANKVEDLNKHV 213
>U58763-2|AAK68876.1| 673|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 3
protein.
Length = 673
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 123 LKHFLYFECVYMYVYQISINLQYESNGLCVLSQNTSAR*KYQMLFLRIE 269
L HFL+F C+++ YQ +L+ ++ G+ + R + +L+ R+E
Sbjct: 178 LDHFLHFRCLFLAYYQ--EHLENDAEGIERKTSFAEERSPFSLLYQRME 224
>U29378-4|AAA68727.2| 667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 197 protein.
Length = 667
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 448 LVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTKLNGIRTVKHNKHR 609
L N QL +LHN+L H V ER+ + I + ++ H+ H+
Sbjct: 71 LDNSEQLAQLHNQLVHCDNVFERLQATLYSFQDNLGSIGQDMKNLQLQSHHIHQ 124
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 217 HRTLRHAESIKCCFCESKYHTKCMNETAKSICEGGDRGYQ 336
H + + I+C C +H++ + I GGD YQ
Sbjct: 640 HAEVHDRQPIQCAHCPQVFHSRVALKQHTRISHGGDTNYQ 679
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 214 CHRTLRHAE--SIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSNEV 387
CH + H + +I+C C++ H CM T KS ++KC +C +S
Sbjct: 829 CHCGMDHGDGDTIECEGCKTWQHMACMGLTLKS------NTSKYKCEMCLPRRLPVSKAE 882
Query: 388 QNSKEINIENTLNLLSEK 441
++ I N L ++K
Sbjct: 883 AAREQERILNRLRAAAKK 900
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +1
Query: 181 IFNMNQMVCAYCHRTLRHAESIKCCFCESKYHTKCMNETAKSICE--GGDRGYQWKCAVC 354
+FN C C + +H IKC FC + + + T K I E G C C
Sbjct: 155 VFNCGHTYCESCIQVCKHQFQIKCPFCTTTSY-QINFSTNKLILEVLNGKSKDTLSCTSC 213
Query: 355 Q 357
Q
Sbjct: 214 Q 214
>AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform b
protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 258 KTTFDTFSV-PKCSVTVRTNHLIHIED*LIFDTHTYKHIQNTKNALDFVFMNLLTFGNLI 82
K D+ S+ P + + ++++HI D + +T TY+H+ N + L+ GN +
Sbjct: 256 KALIDSSSLQPFLNGEKQLDYMVHISDDAVINTPTYRHLMEKLNNPSITHL-LINGGNPV 314
Query: 81 VGSAPS 64
+ + S
Sbjct: 315 IPAVES 320
>AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform a
protein.
Length = 833
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 258 KTTFDTFSV-PKCSVTVRTNHLIHIED*LIFDTHTYKHIQNTKNALDFVFMNLLTFGNLI 82
K D+ S+ P + + ++++HI D + +T TY+H+ N + L+ GN +
Sbjct: 329 KALIDSSSLQPFLNGEKQLDYMVHISDDAVINTPTYRHLMEKLNNPSITHL-LINGGNPV 387
Query: 81 VGSAPS 64
+ + S
Sbjct: 388 IPAVES 393
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 28.3 bits (60), Expect = 5.5
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 370 KLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHE 549
K S + KE+NIEN +L +E + N+ + NE + + E +D E+ E
Sbjct: 249 KKSKKSTEKKELNIENLEDLNNEDEDSENEKEEEIEENEEDYDQSDIEMLDSDEEEAGEE 308
Query: 550 IDEIKTK-LNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNTEK 693
+ + L G+ V+ +K+R A + ++ ++++ ++ V N +K
Sbjct: 309 AAKNRRNLLLGLIGVQEDKNRPSLAPKKRKLVE--EEDEEVETVKNQKK 355
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 28.3 bits (60), Expect = 5.5
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 370 KLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHE 549
K S + KE+NIEN +L +E + N+ + NE + + E +D E+ E
Sbjct: 249 KKSKKSTEKKELNIENLEDLNNEDEDSENEKEEEIEENEEDYDQSDIEMLDSDEEEAGEE 308
Query: 550 IDEIKTK-LNGIRTVKHNKHRYRNAHFEDRVSNRLDDNDHLQMVNNTEK 693
+ + L G+ V+ +K+R A + ++ ++++ ++ V N +K
Sbjct: 309 AAKNRRNLLLGLIGVQEDKNRPSLAPKKRKLVE--EEDEEVETVKNQKK 355
>U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical
protein F31E8.1 protein.
Length = 249
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 491 ANSLCSLGSCILFTSSNFSLNKFNVFSILISLEF*TSFDSFVADFWQTA 345
A+ + S C+ +T SN F +FSI + + TS +S FW+++
Sbjct: 146 ASFVISTRMCLFYTHSNPDFFIFFLFSISFFIFYATSSNSLSRVFWESS 194
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 205 CAYC-HRTLRHAESIKCCFCESKYHTKCMNE--TAKSIC 312
C C + E++KC C+ +YHT C + K IC
Sbjct: 891 CLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRIC 929
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 439 KFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTKLN 576
KFE +NK+ P L NE +K+ + + + L ++E K+N
Sbjct: 5 KFENINKLDSPNLENEDNFLKIGLNAPETASARNLVNVEEDAAKIN 50
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +1
Query: 214 CHRTLRHAE--SIKCCFCESKYHTKCMNETAKSICEGGDRGYQWKCAVCQKSATKLSNEV 387
CH + H + +I+C C++ H CM T KS ++KC +C +S
Sbjct: 821 CHCGMDHGDGDTIECEGCKTWQHMACMGLTLKS------NTSKYKCEMCLPRRLPVSKAE 874
Query: 388 QNSKEINIENTLNLLSEK 441
++ I N L + K
Sbjct: 875 AAREQERILNRLRAAARK 892
>AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical
protein Y67D8C.4 protein.
Length = 167
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 453 HKFKLFA**V*CIFYINFFRILNFIRQFCCRF 358
H FK F F+ F+RI F FCCRF
Sbjct: 135 HFFKQFIFSWFFAFFTGFYRIFWFFLGFCCRF 166
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +1
Query: 460 IQLPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTKLNGIRTVKHNKHRYRNAHFEDRV 639
I LP +HN + HVK ++++ + +I T++N +++++H R A ++ V
Sbjct: 30 ITLPMVHNYVHHVK---RTMNQEVQFCRGSAKDIWTEVNELKSIQHANRTARQAGYDAGV 86
Query: 640 S 642
+
Sbjct: 87 N 87
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 379 NEVQNS--KEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQN 531
NE NS +++++E N + NK +L +LHN H++++T R +N
Sbjct: 1097 NEFVNSFWRKLSMEQWKNTQQKAKISANKSELQELHNIHNHIRMMTLRDSYEN 1149
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 379 NEVQNS--KEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQN 531
NE NS +++++E N + NK +L +LHN H++++T R +N
Sbjct: 706 NEFVNSFWRKLSMEQWKNTQQKAKISANKSELQELHNIHNHIRMMTLRDSYEN 758
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 238 ESIKCCFCESKYHTKCMNE--TAKSICEGGDRG 330
++IKC C ++H C ++ KS+C +RG
Sbjct: 150 KTIKCNSCRRRFHLDCASQWFKEKSVCPACNRG 182
>Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.6 protein.
Length = 681
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 205 CAYCHRTLRHAESIKCCFCESKYHTKCMNE 294
C C L+ A S+KC C H C N+
Sbjct: 365 CDKCATALKLATSMKCRDCHQVVHRSCCNK 394
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 394 SKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVK---LVTERIDKQNEQILHEIDEIK 564
+K IN+E L+EK +NKI + + +E + +V +++ Q E+ DE+K
Sbjct: 700 AKNINLEKKSAELNEKMSALNKINIELMTSERLQCEKRLIVQDKLVSQMEKNSELQDEVK 759
Query: 565 T 567
+
Sbjct: 760 S 760
>Z72512-3|CAA96665.2| 310|Caenorhabditis elegans Hypothetical
protein R07B5.5 protein.
Length = 310
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = -1
Query: 420 CIFYINFFRILN----FIRQFCCRFLANSAFPLISPISSFADTFSR 295
C FY+ ++R + FI+Q CC + + ++S +S TFS+
Sbjct: 260 CNFYVYYWRSTDYRNAFIKQLCCGKVLTTQEAVVSTMSVSNTTFSK 305
>Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical
protein F18H3.4 protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +1
Query: 442 FELVNKIQLPKLHNEL-AHVKLVTERIDKQNEQILHEIDEIKTKLNGIRTVKHNKHRY-R 615
F VN + +PK++ ++ A +K V E++D N+Q +E+D +L G+ + ++
Sbjct: 348 FGSVN-VDVPKVYADVGAALKAVKEKLDFYNQQTTNELD-WGEELGGMEFLSVSRTASDM 405
Query: 616 NAHFEDRVSN 645
++H +D +S+
Sbjct: 406 DSHMDDSISD 415
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 379 NEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDE 558
N++ S N+E L L + + L +L N L+H K ER+ + + D
Sbjct: 1344 NDILKSNNTNMETDLTRLKNRLKSAEDA-LKELKNSLSHAKTEKERLQNAFREKTKQADH 1402
Query: 559 I 561
+
Sbjct: 1403 L 1403
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 379 NEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDE 558
N++ S N+E L L + + L +L N L+H K ER+ + + D
Sbjct: 1417 NDILKSNNTNMETDLTRLKNRLKSAEDA-LKELKNSLSHAKTEKERLQNAFREKTKQADH 1475
Query: 559 I 561
+
Sbjct: 1476 L 1476
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 379 NEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDE 558
N++ S N+E L L + + L +L N L+H K ER+ + + D
Sbjct: 1417 NDILKSNNTNMETDLTRLKNRLKSAEDA-LKELKNSLSHAKTEKERLQNAFREKTKQADH 1475
Query: 559 I 561
+
Sbjct: 1476 L 1476
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 3 FFLNFHVDVFEIFINVLMLFNWVHSLL 83
FF N + F + + VL L+NW S++
Sbjct: 156 FFFNETTEEFPLLVEVLKLYNWNESMV 182
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 3 FFLNFHVDVFEIFINVLMLFNWVHSLL 83
FF N + F + + VL L+NW S++
Sbjct: 149 FFFNETTEEFPLLVEVLKLYNWNESMV 175
>AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical
protein Y116A8C.11 protein.
Length = 281
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 445 ELVNKIQLPKLHNELAHVKLVTERIDKQNEQILHEIDEIKTKLNGI-RTVKHNKHRYRNA 621
EL++K+Q + + + ++K + +K+NE + E + +KT++ + + VK K+ + A
Sbjct: 19 ELISKLQHSQQNFD--NIKKILANFEKENENLADENEILKTRIASLEKDVKQEKNATKMA 76
>AF016676-6|AAG24108.1| 354|Caenorhabditis elegans Seven tm
receptor protein 253 protein.
Length = 354
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -1
Query: 639 NSIFEMCVSVPMLIMFNGTYSI*FSFNLIYFVQNLLVLLIDPFGHQFHVCQLIMQL 472
NSIF +S+ + +F G Y + + I+F+ L L + + H F +L++ L
Sbjct: 87 NSIFPRRISMFVEELFIGFYGLAMAILAIHFIYRYLALSSNIWLHTFESWKLVLWL 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,371,744
Number of Sequences: 27780
Number of extensions: 328263
Number of successful extensions: 1427
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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