Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28l22
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.68 
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    24   1.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   1.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.4  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   6.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   6.4  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   8.4  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 24/88 (27%), Positives = 39/88 (44%)
 Frame = +1

Query: 352 CQKSATKLSNEVQNSKEINIENTLNLLSEKFELVNKIQLPKLHNELAHVKLVTERIDKQN 531
           CQK  TKL N +  ++  +  +  N  +EK     ++ L  +     H    TE   K+ 
Sbjct: 10  CQKKPTKLRNLIYKTEAFDSLHAGN--AEKTLCSGQVCLGSVMQLPIHG---TEPRSKE- 63

Query: 532 EQILHEIDEIKTKLNGIRTVKHNKHRYR 615
           E +LH  D ++   + IR +    HR R
Sbjct: 64  EILLHAKDFLEQYFSSIRRLNSEAHRIR 91


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 250 CCFCESKYHTKCMNETAKSICEGGDRG 330
           C FC  +Y TK    T KS+   G  G
Sbjct: 38  CEFCNRRYRTKNSLTTHKSLQHRGSSG 64


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 190 MNQMVCAYCHRTLRHAESI 246
           +N  VCA CH+  R   S+
Sbjct: 399 LNSAVCALCHKVFRTLNSL 417


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 334 DIPDLLLRRYF*PFHSYTSYGISIRKNNI*YFQRAEVFCDSTH 206
           ++P  ++R +  P H +    ISI KN    F   + F  + H
Sbjct: 529 NVPGAVVRVFLGPKHDHQGRPISISKNQH-LFVELDQFIQNLH 570


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 273 PYEVYE*NG*KYLRRRRSGISMEMRCLPKIC 365
           PY +   NG K L +   G  + ++CL  +C
Sbjct: 362 PYPLNTTNGRKGLLKGGGGYLLGIQCLTVVC 392


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +2

Query: 317 EEIGDINGNALFAKNLQQNCRMKF 388
           EEIG ++   ++  +++  CR  F
Sbjct: 393 EEIGMVDNTTIYKYDVRDGCRTPF 416


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 265 SKYHTKCMNETAKSI 309
           SKY  KC+ ET  +I
Sbjct: 37  SKYRKKCIGETKTTI 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,601
Number of Sequences: 438
Number of extensions: 3455
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)