Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28l19
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 33 0.77
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 33 0.77
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 33 0.77
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 33 0.77
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 33 0.77
AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency ... 32 1.3
AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J recom... 32 1.3
X81479-1|CAA57232.1| 886|Homo sapiens EMR1 protein. 30 5.4
AY158070-1|AAN76451.1| 441|Homo sapiens N-acetylglutamate synth... 30 5.4
AY116538-1|AAM75386.1| 534|Homo sapiens N-acetylglutamate synth... 30 5.4
AY116537-1|AAM75385.1| 534|Homo sapiens N-acetylglutamate synth... 30 5.4
L27476-1|AAA61300.1| 1116|Homo sapiens X104 protein. 30 7.2
BC032296-1|AAH32296.1| 208|Homo sapiens transmembrane protein 1... 30 7.2
BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein ... 30 7.2
AY358696-1|AAQ89059.1| 208|Homo sapiens serine/threonine-rich r... 30 7.2
AY157580-1|AAO13164.1| 208|Homo sapiens keratinocytes associate... 30 7.2
AY008283-1|AAG21694.1| 189|Homo sapiens porimin protein. 30 7.2
AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein ... 30 7.2
AK075420-1|BAC11610.1| 208|Homo sapiens protein ( Homo sapiens ... 30 7.2
AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein ... 30 7.2
AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein ... 30 7.2
EF539882-1|ABS86974.1| 1547|Homo sapiens NRXN1-alpha protein. 29 9.5
BC150247-1|AAI50248.1| 1496|Homo sapiens NRXN1 protein protein. 29 9.5
AB035356-1|BAA87821.1| 1477|Homo sapiens neurexin I-alpha protei... 29 9.5
AB011150-1|BAA25504.2| 1542|Homo sapiens KIAA0578 protein protein. 29 9.5
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 391 TR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRNTSKF*DLKREPPRIRTARKQCSDPLP 570
TR R+ RA PVS + RSR +SR+ T++ R PP R + + P+
Sbjct: 1907 TRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVT 1966
Query: 571 RRIS 582
RR S
Sbjct: 1967 RRRS 1970
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 391 TR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRNTSKF*DLKREPPRIRTARKQCSDPLP 570
TR R+ RA PVS + RSR +SR+ T++ R PP R + + P+
Sbjct: 939 TRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVT 998
Query: 571 RRIS 582
RR S
Sbjct: 999 RRRS 1002
Score = 30.7 bits (66), Expect = 4.1
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +1
Query: 352 RGKRSQRPPGATCTR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRNTSKF*DLKREPPR 531
R RS+ PP A R R+ +P ++ RS A +SRTPR L R PP
Sbjct: 1048 RRSRSRTPP-AIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPA 1106
Query: 532 IR 537
IR
Sbjct: 1107 IR 1108
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 358 KRSQRPPGATCTR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRN-TSKF*DLKREPPRI 534
+R R + TR R+ R PV+ + RSR + +SR+ + ++ R PP I
Sbjct: 999 RRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAI 1058
Query: 535 RTARKQCSDPLPRRIS 582
R + + LPR+ S
Sbjct: 1059 RRRSRSRTPLLPRKRS 1074
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 391 TR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRNTSKF*DLKREPPRIRTARKQCSDPLP 570
TR R+ RA PVS + RSR +SR+ T++ R PP R + + P+
Sbjct: 1907 TRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVT 1966
Query: 571 RRIS 582
RR S
Sbjct: 1967 RRRS 1970
Score = 30.7 bits (66), Expect = 4.1
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +1
Query: 352 RGKRSQRPPGATCTR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRNTSKF*DLKREPPR 531
R RS+ PP A R R+ +P ++ RS A +SRTPR L R PP
Sbjct: 2016 RRSRSRTPP-AIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPA 2074
Query: 532 IR 537
IR
Sbjct: 2075 IR 2076
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 358 KRSQRPPGATCTR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRN-TSKF*DLKREPPRI 534
+R R + TR R+ R PV+ + RSR + +SR+ + ++ R PP I
Sbjct: 1967 RRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAI 2026
Query: 535 RTARKQCSDPLPRRIS 582
R + + LPR+ S
Sbjct: 2027 RRRSRSRTPLLPRKRS 2042
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 391 TR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRNTSKF*DLKREPPRIRTARKQCSDPLP 570
TR R+ RA PVS + RSR +SR+ T++ R PP R + + P+
Sbjct: 430 TRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVT 489
Query: 571 RRIS 582
RR S
Sbjct: 490 RRRS 493
Score = 30.7 bits (66), Expect = 4.1
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +1
Query: 352 RGKRSQRPPGATCTR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRNTSKF*DLKREPPR 531
R RS+ PP A R R+ +P ++ RS A +SRTPR L R PP
Sbjct: 539 RRSRSRTPP-AIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPA 597
Query: 532 IR 537
IR
Sbjct: 598 IR 599
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 358 KRSQRPPGATCTR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRN-TSKF*DLKREPPRI 534
+R R + TR R+ R PV+ + RSR + +SR+ + ++ R PP I
Sbjct: 490 RRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAI 549
Query: 535 RTARKQCSDPLPRRIS 582
R + + LPR+ S
Sbjct: 550 RRRSRSRTPLLPRKRS 565
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 391 TR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRNTSKF*DLKREPPRIRTARKQCSDPLP 570
TR R+ RA PVS + RSR +SR+ T++ R PP R + + P+
Sbjct: 1955 TRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVT 2014
Query: 571 RRIS 582
RR S
Sbjct: 2015 RRRS 2018
Score = 30.7 bits (66), Expect = 4.1
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +1
Query: 352 RGKRSQRPPGATCTR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRNTSKF*DLKREPPR 531
R RS+ PP A R R+ +P ++ RS A +SRTPR L R PP
Sbjct: 2064 RRSRSRTPP-AIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPA 2122
Query: 532 IR 537
IR
Sbjct: 2123 IR 2124
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 358 KRSQRPPGATCTR*RNLRRAIPVS*TKRRSRKAQCMNYQSRTPRN-TSKF*DLKREPPRI 534
+R R + TR R+ R PV+ + RSR + +SR+ + ++ R PP I
Sbjct: 2015 RRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAI 2074
Query: 535 RTARKQCSDPLPRRIS 582
R + + LPR+ S
Sbjct: 2075 RRRSRSRTPLLPRKRS 2090
>AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 3 protein.
Length = 2406
Score = 32.3 bits (70), Expect = 1.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 495 RVSGRPALIVHTLGLSAPSLCSRNWYRPAEVSSSCTCGSRGPLGAFPTAA 346
RV PA + H L +P C+ W + S SC+ G PL + P +A
Sbjct: 2111 RVLFPPAPLPHKLLSRSPETCASPWQKAESRSPSCSPGPAHPLSSRPFSA 2160
>AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J
recombination signal sequences binding protein protein.
Length = 2406
Score = 32.3 bits (70), Expect = 1.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 495 RVSGRPALIVHTLGLSAPSLCSRNWYRPAEVSSSCTCGSRGPLGAFPTAA 346
RV PA + H L +P C+ W + S SC+ G PL + P +A
Sbjct: 2111 RVLFPPAPLPHKLLSRSPETCASPWQKAESRSPSCSPGPAHPLSSRPFSA 2160
>X81479-1|CAA57232.1| 886|Homo sapiens EMR1 protein.
Length = 886
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 87 CTDPRTMQKHAAYSEWADAYSCTRHRCQPGGRNLAIYTVGCKRVEAPESAIECEEVVEDT 266
C DPR +HA + YSC C PG + + + + C+ ++A CE++ E T
Sbjct: 176 CADPRACPEHATCNNTVGNYSCF---CNPGFESSSGH-LSCQGLKA-----SCEDIDECT 226
Query: 267 NM 272
M
Sbjct: 227 EM 228
>AY158070-1|AAN76451.1| 441|Homo sapiens N-acetylglutamate synthase
protein.
Length = 441
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 552 LLPCSSDPRWFSFQISELARVSGRPALIVHTLGLSAPSLCSRNWYRPAEVSSSC 391
+L C +F ++ L R+ +P +++ +APS C W A+++ SC
Sbjct: 54 VLKCQQGVSSLAFALAFLQRMDMKPLVVLGLPAPTAPSGCLSFWEAKAQLAKSC 107
>AY116538-1|AAM75386.1| 534|Homo sapiens N-acetylglutamate
synthetase protein.
Length = 534
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 552 LLPCSSDPRWFSFQISELARVSGRPALIVHTLGLSAPSLCSRNWYRPAEVSSSC 391
+L C +F ++ L R+ +P +++ +APS C W A+++ SC
Sbjct: 147 VLKCQQGVSSLAFALAFLQRMDMKPLVVLGLPAPTAPSGCLSFWEAKAQLAKSC 200
>AY116537-1|AAM75385.1| 534|Homo sapiens N-acetylglutamate
synthetase protein.
Length = 534
Score = 30.3 bits (65), Expect = 5.4
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 552 LLPCSSDPRWFSFQISELARVSGRPALIVHTLGLSAPSLCSRNWYRPAEVSSSC 391
+L C +F ++ L R+ +P +++ +APS C W A+++ SC
Sbjct: 147 VLKCQQGVSSLAFALAFLQRMDMKPLVVLGLPAPTAPSGCLSFWEAKAQLAKSC 200
>L27476-1|AAA61300.1| 1116|Homo sapiens X104 protein.
Length = 1116
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 435 KETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTP 575
++T+ +G Y +E D P E ++ S R++E +E++ + +P P
Sbjct: 923 EDTDGEGGAYTDNELDEPAEEPLVSSITRSSEPVQHEESIRKPSPEP 969
>BC032296-1|AAH32296.1| 208|Homo sapiens transmembrane protein 123
protein.
Length = 208
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 43 PSALDHQTTLSRISTARTRGQCRSTPRIQSGLTRTLARGTAVSPGVGTSLSTRSVASAWK 222
P+A + TT +ST T +STP+ S T T+ S T + +S
Sbjct: 91 PTAASNTTTPGMVSTNMTSTTLKSTPKTTSVSQNTSQISTSTMTVTHNSSVTSAASSVTI 150
Query: 223 PQNRR*NARKSSKIQTCS 276
A+K SK T S
Sbjct: 151 TTTMHSEAKKGSKFDTGS 168
>BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1190
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 435 KETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTP 575
++T+ +G Y +E D P E ++ S R++E +E++ + +P P
Sbjct: 923 EDTDGEGGAYTDNELDEPAEEPLVSSITRSSEPVQHEESIRKPSPEP 969
>AY358696-1|AAQ89059.1| 208|Homo sapiens serine/threonine-rich
receptor protein.
Length = 208
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 43 PSALDHQTTLSRISTARTRGQCRSTPRIQSGLTRTLARGTAVSPGVGTSLSTRSVASAWK 222
P+A + TT +ST T +STP+ S T T+ S T + +S
Sbjct: 91 PTAASNTTTPGMVSTNMTSTTLKSTPKTTSVSQNTSQISTSTMTVTHNSSVTSAASSVTI 150
Query: 223 PQNRR*NARKSSKIQTCS 276
A+K SK T S
Sbjct: 151 TTTMHSEAKKGSKFDTGS 168
>AY157580-1|AAO13164.1| 208|Homo sapiens keratinocytes associated
transmembrane protein 3 protein.
Length = 208
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 43 PSALDHQTTLSRISTARTRGQCRSTPRIQSGLTRTLARGTAVSPGVGTSLSTRSVASAWK 222
P+A + TT +ST T +STP+ S T T+ S T + +S
Sbjct: 91 PTAASNTTTPGMVSTNMTSTTLKSTPKTTSVSQNTSQISTSTMTVTHNSSVTSAASSVTI 150
Query: 223 PQNRR*NARKSSKIQTCS 276
A+K SK T S
Sbjct: 151 TTTMHSEAKKGSKFDTGS 168
>AY008283-1|AAG21694.1| 189|Homo sapiens porimin protein.
Length = 189
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 43 PSALDHQTTLSRISTARTRGQCRSTPRIQSGLTRTLARGTAVSPGVGTSLSTRSVASAWK 222
P+A + TT +ST T +STP+ S T T+ S T + +S
Sbjct: 72 PTAASNTTTPGMVSTNMTSTTLKSTPKTTSVSQNTSQISTSTMTVTHNSSVTSAASSVTI 131
Query: 223 PQNRR*NARKSSKIQTCS 276
A+K SK T S
Sbjct: 132 TTTMHSEAKKGSKFDTGS 149
>AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1190
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 435 KETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTP 575
++T+ +G Y +E D P E ++ S R++E +E++ + +P P
Sbjct: 923 EDTDGEGGAYTDNELDEPAEEPLVSSITRSSEPVQHEESIRKPSPEP 969
>AK075420-1|BAC11610.1| 208|Homo sapiens protein ( Homo sapiens
cDNA PSEC0111 fis, clone NT2RP2006028, moderately
similar to Pro-oncosis receptor inducing membrane injury
gene. ).
Length = 208
Score = 29.9 bits (64), Expect = 7.2
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 43 PSALDHQTTLSRISTARTRGQCRSTPRIQSGLTRTLARGTAVSPGVGTSLSTRSVASAWK 222
P+A + TT +ST T +STP+ S T T+ S T + +S
Sbjct: 91 PTAASNTTTPGMVSTNMTSTTLKSTPKTTSVSQNTSQISTSTMTVTHNSSVTSAASSVTI 150
Query: 223 PQNRR*NARKSSKIQTCS 276
A+K SK T S
Sbjct: 151 TTTMHSEAKKGSKFDTGS 168
>AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein ZO-2
isoform C protein.
Length = 1167
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 435 KETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTP 575
++T+ +G Y +E D P E ++ S R++E +E++ + +P P
Sbjct: 900 EDTDGEGGAYTDNELDEPAEEPLVSSITRSSEPVQHEESIRKPSPEP 946
>AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein ZO-2
isoform A protein.
Length = 1190
Score = 29.9 bits (64), Expect = 7.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 435 KETEQKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTP 575
++T+ +G Y +E D P E ++ S R++E +E++ + +P P
Sbjct: 923 EDTDGEGGAYTDNELDEPAEEPLVSSITRSSEPVQHEESIRKPSPEP 969
>EF539882-1|ABS86974.1| 1547|Homo sapiens NRXN1-alpha protein.
Length = 1547
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 490 FGASCSDSSYTGPFCSVSLFKKLVSPGGGFFILYMW 383
F CS +S++GP C+ + S GGG I Y W
Sbjct: 1145 FSCDCSMTSFSGPLCNDPGTTYIFSKGGG-QITYKW 1179
>BC150247-1|AAI50248.1| 1496|Homo sapiens NRXN1 protein protein.
Length = 1496
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 490 FGASCSDSSYTGPFCSVSLFKKLVSPGGGFFILYMW 383
F CS +S++GP C+ + S GGG I Y W
Sbjct: 1097 FSCDCSMTSFSGPLCNDPGTTYIFSKGGG-QITYKW 1131
>AB035356-1|BAA87821.1| 1477|Homo sapiens neurexin I-alpha protein
protein.
Length = 1477
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 490 FGASCSDSSYTGPFCSVSLFKKLVSPGGGFFILYMW 383
F CS +S++GP C+ + S GGG I Y W
Sbjct: 1105 FSCDCSMTSFSGPLCNDPGTTYIFSKGGG-QITYKW 1139
>AB011150-1|BAA25504.2| 1542|Homo sapiens KIAA0578 protein protein.
Length = 1542
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 490 FGASCSDSSYTGPFCSVSLFKKLVSPGGGFFILYMW 383
F CS +S++GP C+ + S GGG I Y W
Sbjct: 1143 FSCDCSMTSFSGPLCNDPGTTYIFSKGGG-QITYKW 1177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,346,074
Number of Sequences: 237096
Number of extensions: 2512960
Number of successful extensions: 7752
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7730
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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