Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28l19
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82286-3|CAB05309.1|  781|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    29   1.9  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    29   1.9  
Z81038-7|CAB02764.1|  453|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z46267-12|CAD45595.2|  528|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z46267-11|CAA86426.1|  611|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z46267-10|CAA86425.1|  581|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF039569-1|AAB99999.1|  451|Caenorhabditis elegans aryl hydrocar...    28   5.8  
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ...    28   5.8  
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ...    28   5.8  
Z83316-7|CAB05890.1|  134|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z82286-3|CAB05309.1|  781|Caenorhabditis elegans Hypothetical
           protein W02A2.6 protein.
          Length = 781

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +3

Query: 447 QKGPVYELSEQDAPKHEQVLRSEKRTTEDPNCKEAVLRSAPTPD 578
           Q+ PV+E  E +AP H   +R+ +  T   + K +V+   PTP+
Sbjct: 579 QENPVFENLEYEAPPHP--IRTARTPTPIKDLKYSVISLFPTPE 620


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
 Frame = +3

Query: 126  SEWADAYSCTRHRCQPGGRN------LAIYTVGCKRVEAPESA--IECEEVVEDTNMQFP 281
            S+  D   CT  RC PG R       +A +    ++ + P +A  + CE+V   T   F 
Sbjct: 3904 SDGLDESQCTLRRCLPGHRQCDDGTCIAEHKWCDRKKDCPNAADELHCEDVSRRTCSPFE 3963

Query: 282  FCCTRLRCL 308
            F C    C+
Sbjct: 3964 FECANSVCI 3972


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
 Frame = +3

Query: 126  SEWADAYSCTRHRCQPGGRN------LAIYTVGCKRVEAPESA--IECEEVVEDTNMQFP 281
            S+  D   CT  RC PG R       +A +    ++ + P +A  + CE+V   T   F 
Sbjct: 3904 SDGLDESQCTLRRCLPGHRQCDDGTCIAEHKWCDRKKDCPNAADELHCEDVSRRTCSPFE 3963

Query: 282  FCCTRLRCL 308
            F C    C+
Sbjct: 3964 FECANSVCI 3972


>Z81038-7|CAB02764.1|  453|Caenorhabditis elegans Hypothetical
           protein C25A1.11 protein.
          Length = 453

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -2

Query: 555 ALLPCSSDP---RWFSFQISELARVSGRPALIVHTLGLSAPSLCSRNWYRPAEVSSSCT 388
           A +P  +DP     FS ++SE  +++   A +   +GLS+  L  R W+  A  +   T
Sbjct: 277 ASMPVCADPTSTNQFSVRVSEDGKMTFIDARVSDLIGLSSDQLIGRYWWNLAHPADEKT 335


>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
           protein F49E2.5j protein.
          Length = 1100

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +3

Query: 336 RVLGQPWETLPAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSE 515
           +V  QP E+ PA P         PP  +    NK+ ++K      SE+   +  Q   S 
Sbjct: 391 KVTEQPVESAPAPPQVEQVVETTPPASENKKKNKKDKKKSE----SEKAVEEPVQAAPSS 446

Query: 516 KRTTED 533
           K+ T D
Sbjct: 447 KKPTAD 452


>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
           protein F49E2.5i protein.
          Length = 1030

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +3

Query: 336 RVLGQPWETLPAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSE 515
           +V  QP E+ PA P         PP  +    NK+ ++K      SE+   +  Q   S 
Sbjct: 391 KVTEQPVESAPAPPQVEQVVETTPPASENKKKNKKDKKKSE----SEKAVEEPVQAAPSS 446

Query: 516 KRTTED 533
           K+ T D
Sbjct: 447 KKPTAD 452


>Z46267-12|CAD45595.2|  528|Caenorhabditis elegans Hypothetical
           protein F49E2.5g protein.
          Length = 528

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +3

Query: 336 RVLGQPWETLPAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSE 515
           +V  QP E+ PA P         PP  +    NK+ ++K      SE+   +  Q   S 
Sbjct: 308 KVTEQPVESAPAPPQVEQVVETTPPASENKKKNKKDKKKSE----SEKAVEEPVQAAPSS 363

Query: 516 KRTTED 533
           K+ T D
Sbjct: 364 KKPTAD 369


>Z46267-11|CAA86426.1|  611|Caenorhabditis elegans Hypothetical
           protein F49E2.5f protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +3

Query: 336 RVLGQPWETLPAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSE 515
           +V  QP E+ PA P         PP  +    NK+ ++K      SE+   +  Q   S 
Sbjct: 391 KVTEQPVESAPAPPQVEQVVETTPPASENKKKNKKDKKKSE----SEKAVEEPVQAAPSS 446

Query: 516 KRTTED 533
           K+ T D
Sbjct: 447 KKPTAD 452


>Z46267-10|CAA86425.1|  581|Caenorhabditis elegans Hypothetical
           protein F49E2.5e protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +3

Query: 336 RVLGQPWETLPAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSE 515
           +V  QP E+ PA P         PP  +    NK+ ++K      SE+   +  Q   S 
Sbjct: 391 KVTEQPVESAPAPPQVEQVVETTPPASENKKKNKKDKKKSE----SEKAVEEPVQAAPSS 446

Query: 516 KRTTED 533
           K+ T D
Sbjct: 447 KKPTAD 452


>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
           protein F49E2.5a protein.
          Length = 1215

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +3

Query: 336 RVLGQPWETLPAAPWSHMYKMKKPPPGDTSFLNKETEQKGPVYELSEQDAPKHEQVLRSE 515
           +V  QP E+ PA P         PP  +    NK+ ++K      SE+   +  Q   S 
Sbjct: 391 KVTEQPVESAPAPPQVEQVVETTPPASENKKKNKKDKKKSE----SEKAVEEPVQAAPSS 446

Query: 516 KRTTED 533
           K+ T D
Sbjct: 447 KKPTAD 452


>AF039569-1|AAB99999.1|  451|Caenorhabditis elegans aryl hydrocarbon
           receptor nucleartranslocator ortholog AHA-1 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -2

Query: 555 ALLPCSSDP---RWFSFQISELARVSGRPALIVHTLGLSAPSLCSRNWYRPAEVSSSCT 388
           A +P  +DP     FS ++SE  +++   A +   +GLS+  L  R W+  A  +   T
Sbjct: 275 ASMPVCADPTSTNQFSVRVSEDGKMTFIDARVSDLIGLSSDQLIGRYWWNLAHPADEKT 333


>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
           protein C36B7.5b protein.
          Length = 1148

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +3

Query: 21  VLVGLITTISAGPSNDSFKDQYCTDPRTMQKHAAYSEWAD-AYSCTRHRCQPG 176
           VL G+  T       D+F+ + C +    Q      EW++    C   RC+PG
Sbjct: 780 VLFGIQATPKCHCPGDTFQTRPCLEQNACQDPVGKCEWSEWGEWCGCMRCRPG 832


>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
           protein C36B7.5a protein.
          Length = 1121

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +3

Query: 21  VLVGLITTISAGPSNDSFKDQYCTDPRTMQKHAAYSEWAD-AYSCTRHRCQPG 176
           VL G+  T       D+F+ + C +    Q      EW++    C   RC+PG
Sbjct: 780 VLFGIQATPKCHCPGDTFQTRPCLEQNACQDPVGKCEWSEWGEWCGCMRCRPG 832


>Z83316-7|CAB05890.1|  134|Caenorhabditis elegans Hypothetical
           protein B0379.6 protein.
          Length = 134

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
 Frame = +3

Query: 156 RHRCQPGGRNLAIYTVGCKRVEAPESAIE---CEEVVED-TNMQFPFCCTRLRCLVVVRG 323
           R     GGR L    VGC    APE+ I+    E    D T+    F C+ LR +     
Sbjct: 54  RAHLMKGGRRLTRNCVGCGGSRAPETTIDDARTENATRDVTSDVLQFGCSLLRVIEEEEE 113

Query: 324 E-VWTRVLGQPWETLPAAPWSH 386
           E V TR   +  + L    WSH
Sbjct: 114 EPVETRRTIEE-DGLKQKGWSH 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,563,375
Number of Sequences: 27780
Number of extensions: 357205
Number of successful extensions: 1146
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)