Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28l17
         (480 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071240-1|AAL48862.1|  478|Drosophila melanogaster RE27943p pro...    31   0.62 
AE013599-3721|AAF47092.1|  478|Drosophila melanogaster CG17658-P...    31   0.62 
AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA...    29   4.4  

>AY071240-1|AAL48862.1|  478|Drosophila melanogaster RE27943p
           protein.
          Length = 478

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 61  KVNRLVSDEKTIIKESSVLCSVLCRGCRMDNY 156
           KV + ++  +T+++++ V  SV+CRGC M  Y
Sbjct: 39  KVEKNLAHLQTLLEKAHVKPSVICRGCNMQRY 70


>AE013599-3721|AAF47092.1|  478|Drosophila melanogaster CG17658-PA
           protein.
          Length = 478

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 61  KVNRLVSDEKTIIKESSVLCSVLCRGCRMDNY 156
           KV + ++  +T+++++ V  SV+CRGC M  Y
Sbjct: 39  KVEKNLAHLQTLLEKAHVKPSVICRGCNMQRY 70


>AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA
           protein.
          Length = 1427

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 270 KINHSLKPNALSPLDK*VPSPSGLRERCT 184
           K+N +L    L+PLDK VPSP   R   T
Sbjct: 518 KLNLTLVTTTLAPLDKSVPSPKAPRTPAT 546


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,250,735
Number of Sequences: 53049
Number of extensions: 350572
Number of successful extensions: 738
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)