Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28l13
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical pr... 31 0.56
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF036702-8|AAR85905.1| 377|Caenorhabditis elegans Hypothetical ... 29 3.0
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical ... 28 5.2
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 28 6.9
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 28 6.9
Z74040-1|CAA98514.2| 340|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z99280-1|CAB16499.1| 225|Caenorhabditis elegans Hypothetical
protein Y57G11B.5 protein.
Length = 225
Score = 31.5 bits (68), Expect = 0.56
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +1
Query: 118 YTFVFLSLFLVDYLLGNGFVDMFQTIFCKIACFVKKTLREEAKKTQLV-GKENPISIPVI 294
YT LS +D L G F + Q +CF K EE++K + G + + I
Sbjct: 133 YTACVLSEVPMDQLQGFTFKTVLQYAKPVTSCFAKHQECEESEKAEFYKGMMASVELVDI 192
Query: 295 FIEIL--VLSLTIAFLNKY-KKYRAKDRIDEL 381
F+ IL V S + F++ + KK+ KD +D L
Sbjct: 193 FVPILEAVHSGNLEFIHTFDKKFNPKD-LDNL 223
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 388 ESKEAIRQ-TNEFLEKWRLRRVSAPLMTSRKYPLDSVSRLVMFNL 519
ES++ +RQ T EF++K+R AP++ SR L+ + L+ L
Sbjct: 433 ESQQQLRQHTQEFIDKFRYNAKRAPMVQSRIKMLEKLPVLLPVEL 477
>AF036702-8|AAR85905.1| 377|Caenorhabditis elegans Hypothetical
protein F33D4.5 protein.
Length = 377
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 388 ESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYP 483
E KEA R+ F+EK +RR+ L S+++P
Sbjct: 51 EEKEAARKQYSFMEKINIRRMKNLLSPSQQFP 82
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 334 LNKYKKYRAKDRIDELLNESKEAIRQTNEFLEKWRLRRVSAPLMTSRKYPLDSV 495
+NK +K AK + LN+ +E + Q E + +L R +A + K L+++
Sbjct: 64 MNKREKNEAKTLYKKHLNQGQEGMNQLEELINNMKLWRANAINESREKGDLNAI 117
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical
protein W07E11.1 protein.
Length = 2207
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 412 TNEFLEKWRLRRVSAPLMTSRKYPLDSVSRLVMF 513
TNE+L + L +V+ LM + LDS RL ++
Sbjct: 499 TNEYLNRLHLEQVNPGLMKKKDVHLDSDRRLALY 532
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical
protein W07E11.1 protein.
Length = 2207
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 412 TNEFLEKWRLRRVSAPLMTSRKYPLDSVSRLVMF 513
TNE+L + L +V+ LM + LDS RL ++
Sbjct: 499 TNEYLNRLHLEQVNPGLMKKKDVHLDSDRRLALY 532
>AF038618-1|AAB92068.2| 386|Caenorhabditis elegans Hypothetical
protein F42G8.9 protein.
Length = 386
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 441 AEGIGAFNDLTKISPRFSITLSNVQFELKV 530
++ +G FN + KI PR S++L + KV
Sbjct: 269 SDSVGTFNSMEKIEPRVSVSLDKLNENGKV 298
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 665 QYSCNGCPTLQTETHYCLTPEI 600
QY C+GC L ET CL E+
Sbjct: 2117 QYICDGCIALNVETLMCLLAEM 2138
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 665 QYSCNGCPTLQTETHYCLTPEI 600
QY C+GC L ET CL E+
Sbjct: 2145 QYICDGCIALNVETLMCLLAEM 2166
>Z74040-1|CAA98514.2| 340|Caenorhabditis elegans Hypothetical
protein K10D6.2a protein.
Length = 340
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 226 FSSRNKLSCRISFGTYQRNHCLTNN 152
F S + S ++SF T +R+HC T N
Sbjct: 295 FESTHPSSIKMSFHTEERSHCSTTN 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,603,060
Number of Sequences: 27780
Number of extensions: 325520
Number of successful extensions: 902
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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