Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28k23
(616 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0170 + 21482962-21483018,21483133-21483183,21483313-214835... 217 4e-57
07_01_0658 + 4923205-4923334,4923448-4923526,4923629-4923723,492... 87 1e-17
02_01_0523 - 3792864-3792962,3793509-3793610,3793861-3793974,379... 67 1e-11
12_01_0536 - 4212206-4212369,4212476-4212629,4212713-4212811,421... 44 1e-04
02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881 41 9e-04
12_01_0537 - 4215833-4216005,4216168-4216366,4216399-4216497,421... 36 0.034
07_03_0878 - 22251023-22251166,22251279-22251329,22251425-222515... 34 0.078
05_05_0017 + 21546434-21546841 32 0.42
05_03_0458 + 14280953-14281866,14281964-14282912 30 1.3
12_02_0674 - 21745321-21746223,21746229-21747608 30 1.7
08_02_0998 - 23411422-23411649,23411897-23412625 30 1.7
07_03_1107 - 24024387-24024497,24025799-24026410 29 2.2
07_03_0879 - 22256033-22256173,22256417-22256492,22256830-222572... 29 2.2
06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554 29 2.9
01_01_0871 + 6813091-6814212 29 2.9
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 29 3.9
11_01_0066 - 536281-537196,537397-537452 28 5.1
05_03_0129 + 8757718-8758072,8759422-8759531 28 5.1
06_01_0949 - 7317123-7317425,7317548-7317883,7317969-7318364 28 6.8
04_04_1333 - 32721968-32721973,32722101-32722706,32722822-32722941 28 6.8
01_05_0423 + 22032940-22033695 28 6.8
11_06_0610 - 25449085-25453284 27 8.9
11_02_0106 - 8358372-8360120 27 8.9
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 27 8.9
>03_05_0170 +
21482962-21483018,21483133-21483183,21483313-21483500,
21483587-21483671,21483848-21483902,21483998-21484041,
21485045-21485113,21485207-21485307,21485396-21485452,
21485540-21485636
Length = 267
Score = 217 bits (531), Expect = 4e-57
Identities = 105/207 (50%), Positives = 132/207 (63%), Gaps = 2/207 (0%)
Frame = +2
Query: 2 VTEIDKKVEDTLVGGLSKAFPDHKFIGEE-SVADGTKCELTDSPTWIIDPVDGTMNFVHG 178
VTE DK ED + L K +PDHKFIGEE S A G +LTD PTWI+DP+DGT NFVHG
Sbjct: 40 VTETDKACEDLIFNHLRKHYPDHKFIGEETSAALGATADLTDDPTWIVDPLDGTTNFVHG 99
Query: 179 FPHSSISVGLTINKEPVVGIIYNPILGQMFTAKKGQGAFLNETQIHVSQVKEFATALVTF 358
FP +S+GLT+ K P VG++YNPI+ ++FTA +G+GAFLN + I S E AL+
Sbjct: 100 FPFVCVSIGLTVGKIPTVGVVYNPIMNELFTAVRGKGAFLNGSPIKTSSQNELVKALLVT 159
Query: 359 EAGTSRDPERFKAVMENYKILVSKGHGVRTLGSAALNMAMVALGGADAYFEFGIHA-WDV 535
E GT RD L+ K +R GS ALNM VA G D +E G WDV
Sbjct: 160 EVGTKRDKATLDDTTNRINKLLFKIRSIRMCGSLALNMCGVACGRLDLCYEIGFGGPWDV 219
Query: 536 AAGTVLVREAGGVVIDPAGGPFDILSR 616
AAG +++REAGG V DP+GG FD+++R
Sbjct: 220 AAGALILREAGGFVFDPSGGEFDLMAR 246
>07_01_0658 +
4923205-4923334,4923448-4923526,4923629-4923723,
4923802-4923851,4924216-4924340,4924703-4924769,
4924871-4924960,4925281-4925392,4925597-4925667
Length = 272
Score = 87.0 bits (206), Expect = 1e-17
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Frame = +2
Query: 2 VTEIDKKVEDTLVGGLSKAFPDHKFIGEESVADGTKC-ELTDSPTWIIDPVDGTMNFVHG 178
VT D++ E+ +V + K+FP H GEE+ G +C E + W++DP+DGT +F+ G
Sbjct: 46 VTIADREAEEAMVSVILKSFPSHAVFGEEN---GWRCVEKSADYVWVLDPIDGTKSFITG 102
Query: 179 FPHSSISVGLTINKEPVVGIIYNPILGQMFTAKKGQGAFLNETQIHVSQVKEFATALVTF 358
P + L +PV+GII PIL + + G LN +I V A A +
Sbjct: 103 KPLFGTLISLLYKGKPVIGIIDQPILRERWVGVDGMKTTLNGQEISVRPCNVLAQAYL-- 160
Query: 359 EAGTSRDPERFKAVMENYKILVSKGHGVRTLGSAALNMAMVALGGADAYFEFGIHAWDVA 538
+ P F E+ I V V G A++A G D E G+ +D
Sbjct: 161 ---YTTSPHLFAGEAEDAFIRVRDKVKVPLYGCDCYAYALLASGFVDLVVESGLKPYDFL 217
Query: 539 AGTVLVREAGGVVIDPAG 592
+ ++ AGG + D G
Sbjct: 218 SLVPVIEGAGGSITDWKG 235
>02_01_0523 -
3792864-3792962,3793509-3793610,3793861-3793974,
3794060-3794158,3794725-3794779,3795266-3795433,
3795668-3795735,3796133-3796195,3796425-3796703
Length = 348
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +2
Query: 410 YKILVSKGHGVRTLGSAALNMAMVALGGADAYFEFGIHAWDVAAGTVLVREAGGVVIDPA 589
+K GVR LGSAA +M+ VALG +AY+E+ + WD+AAG ++V EAGG+V
Sbjct: 236 FKEYTDISRGVRRLGSAAADMSHVALGITEAYWEYRLKPWDMAAGVLIVEEAGGMVSRMD 295
Query: 590 GGPFDILSR 616
GG F + R
Sbjct: 296 GGEFTVFDR 304
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +2
Query: 2 VTEIDKKVEDTLVGGLSKAFPDHKFIGEESVADGTKCELTDSPTWIIDPVDGTMNFVHGF 181
VT+ DK E ++ + K FPDH +GEE G + W IDP+ F F
Sbjct: 135 VTDTDKLSESVILEVVRKTFPDHLILGEEG---GLIGDALSEYLWCIDPLGLATLFSLRF 191
Query: 182 PHSSISVGLTINKEPVVGII 241
S+S+G+ +P +
Sbjct: 192 TTFSVSIGVLFRGKPAASTV 211
>12_01_0536 -
4212206-4212369,4212476-4212629,4212713-4212811,
4212917-4213124,4214437-4214639,4214728-4214801,
4214968-4215043,4215256-4215360
Length = 360
Score = 43.6 bits (98), Expect = 1e-04
Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 26/195 (13%)
Frame = +2
Query: 98 DGTKCELTDSPT-WIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPIL------ 256
DG K E S WI+DP+DGT F+ G ++ I + L + V+G + P L
Sbjct: 130 DGGKSEGGPSGRYWILDPIDGTKGFIRGDQYA-IGLALLDEGKVVLGAMACPNLPFKSID 188
Query: 257 ----------GQMFTAKKGQGAFLNETQIHVSQVKEFATALVTFEAGTSRDPERFKAVME 406
G +F+A G G+ + + Q + +A ER K M
Sbjct: 189 HNGGSSGDQVGALFSATIGCGSTVESLEGSQPQKISVCSISNPVDASFFESYER-KHCMR 247
Query: 407 NYKILVSKGHGVRT----LGSAALNMAMVALGGADAYFEFGIH-----AWDVAAGTVLVR 559
+ +++ G++ + S A VA G Y+ F WD AAG+++V
Sbjct: 248 DCTSSIAEKLGIQAPPVRIDSQA-KYGAVAQGDGAIYWRFPHKRSKEAVWDHAAGSIIVT 306
Query: 560 EAGGVVIDPAGGPFD 604
EAGG+V D +G D
Sbjct: 307 EAGGLVKDASGNDLD 321
>02_05_1139 - 34381575-34381878,34382181-34382865,34383479-34383881
Length = 463
Score = 40.7 bits (91), Expect = 9e-04
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 527 WDVAAGTVLVREAGGVVIDPAGGPFD 604
WD AAG V++REAGGV+ D G P D
Sbjct: 399 WDHAAGVVIIREAGGVITDAGGRPLD 424
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 134 WIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNP 250
W++DPVDGT+ FV G + ++++ L + E V+G++ P
Sbjct: 224 WVLDPVDGTLGFVRGDQY-AVALALIEDGEVVLGVLGCP 261
>12_01_0537 -
4215833-4216005,4216168-4216366,4216399-4216497,
4216599-4216809,4217264-4217466,4217557-4217633,
4217874-4217949,4218342-4218425
Length = 373
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 527 WDVAAGTVLVREAGGVVIDPAGGPFD 604
WD AAG+++V EAGG+V D +G D
Sbjct: 306 WDHAAGSIVVTEAGGLVTDASGNDLD 331
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 134 WIIDPVDGTMNFVHGFPHSSISVGLTINKEPVVGIIYNPIL 256
W++DP+DGT F+ G + +I++ L + V+G++ P L
Sbjct: 137 WVLDPIDGTKGFLRGDQY-AIALALLDEGKVVLGVLACPNL 176
>07_03_0878 -
22251023-22251166,22251279-22251329,22251425-22251500,
22251847-22252229,22252983-22253042,22253133-22253368,
22253457-22253559,22254692-22254824,22254930-22255039
Length = 431
Score = 34.3 bits (75), Expect = 0.078
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 518 IHAWDVAAGTVLVREAGGVVIDPAGGPFDI 607
+ +WD A G + V+EAGG + D +G P D+
Sbjct: 366 LKSWDHAVGVICVQEAGGQISDWSGKPLDL 395
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 134 WIIDPVDGTMNFVHGFPH-SSISVGLTINKEPVVGIIYNP 250
W++DP+DGT F+ G + + L +N++ V G++ P
Sbjct: 194 WVLDPIDGTKGFLGGDDALYVVGLALVVNEKVVAGVMGCP 233
>05_05_0017 + 21546434-21546841
Length = 135
Score = 31.9 bits (69), Expect = 0.42
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 591 PAGSMTTP-PASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEPNVLT 439
PAG+ TTP PA+ T PA + +A +S A+APP T A V T
Sbjct: 80 PAGATTTPAPAAPAATAPAPSPEADGKSSGAAAAPPLMTWPAVLAGAAGVAT 131
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 609 NMSNGPPAGSMTTPPASLTKTVPAATSQA*IPNSK*ASAPP 487
N + PP+ S +TP +S T TVP + + P+S +S PP
Sbjct: 28 NAAPSPPS-SNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPP 67
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -2
Query: 159 VPSTGSMIHVGESVNSHFVPSATDSSPINLWSGKALERPPTSVSSTFLS 13
+PST S + + +PS T +SP++ +GK P TS ST S
Sbjct: 556 IPSTPSTCELSTATGK--IPSTTCTSPLSTATGKTSSTPSTSPLSTSTS 602
>08_02_0998 - 23411422-23411649,23411897-23412625
Length = 318
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +2
Query: 155 GTMNFVHGFPHSSISVGLTINKEPVVGIIYNPILG---QMFTAKKGQGAFLNETQI-HVS 322
G + V G P S+ VG+ ++ P +G + P+LG + G GA E + V
Sbjct: 129 GGVQVVGGHPVSAEEVGVDHDEAPDLGAVGEPLLGHPHRYVVRDVGAGALAAEVEAGEVG 188
Query: 323 QVKEFATALVTFEAGTSRDP-ERFKAV 400
V E LV G S DP ER V
Sbjct: 189 VVDE--PRLVAIPRGVSGDPRERLPRV 213
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/58 (41%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = -2
Query: 594 PPAGSMTTPPASLTKT-VPAATSQA*IPNSK*ASAPPKA--TIAIFSAAEPNVLTPCP 430
P A TTPPAS KT PAA P + AS PP A T A TP P
Sbjct: 28 PAAAPATTPPASSKKTPAPAAAPTTTTPPA--ASTPPAAAPTTPATPAPAEAPTTPAP 83
>07_03_0879 -
22256033-22256173,22256417-22256492,22256830-22257212,
22257924-22257983,22258073-22258303,22258475-22258562,
22259265-22259365,22259586-22259727,22259824-22259939
Length = 445
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 DGTKCELTDSPTWIIDPVDGTMNFVH-GFPHSSISVGLTINKEPVVGIIYNP 250
D + + W++DP+DGT F + + L +N + V G++ +P
Sbjct: 214 DSASFDSNPATYWVLDPIDGTQGFSKVDDTLYVVGLALVVNGKVVAGVMGSP 265
>06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554
Length = 449
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -2
Query: 591 PAGSMTTPPASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEP 451
PA + T PA+ + PAA S A P + +AP A+ A+ A P
Sbjct: 358 PAAASTAAPAAASTAAPAAASTA-APAAASTAAPAAASTAVPDDATP 403
>01_01_0871 + 6813091-6814212
Length = 373
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = -2
Query: 594 PPAGSMTTPPASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEPNVLTPCPLLTR 418
PP S PA+ + + + A P S S PP A +A A P PL+ R
Sbjct: 220 PPGASKNASPATSYDSGEESHAAAASPTSVLRSFPPSAVVATADTANKKQPPPPPLVVR 278
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 615 LDNMSNGPPAGSMTTPP-ASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEPNVLT 439
+ + S+ PPA TPP A+ T P A++ + P + + +PP T +A P T
Sbjct: 1 MSSPSSPPPANQTATPPPANQTAAPPPASNNSSSPPAPGSLSPPSLTPP--AAPSPPSTT 58
Query: 438 P 436
P
Sbjct: 59 P 59
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -2
Query: 594 PPAGSMTTPPASLTKTVP-AATSQA*IPNSK*ASAP--PKATIAIFSAAEPNVLTPCPLL 424
PP + T PP S T T A+ + IP + P P+AT+ P+ T P+
Sbjct: 231 PPPSTATPPPPSPTPTTTRASPTPPPIPTATVRPPPPLPRATVTPTPTTPPSTATTTPIP 290
Query: 423 T 421
T
Sbjct: 291 T 291
>05_03_0129 + 8757718-8758072,8759422-8759531
Length = 154
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 201 TDIELCGKPCTKFIVPSTGSMIHVGESVNSHFVPSAT 91
+ ++L PC K + S+I + + VN H +PS +
Sbjct: 65 SQVDLLAVPCDKEELCDNASLISIPQLVNEHAIPSVS 101
>06_01_0949 - 7317123-7317425,7317548-7317883,7317969-7318364
Length = 344
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 107 KCELTDSPTWIID-PVDGTMNFVHG 178
KC + D P I + P DGT+NFV G
Sbjct: 205 KCSVLDLPQAISEAPADGTVNFVAG 229
>04_04_1333 - 32721968-32721973,32722101-32722706,32722822-32722941
Length = 243
Score = 27.9 bits (59), Expect = 6.8
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = -2
Query: 591 PAGSMTTPPASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEPNV---LTPCPLLT 421
PAG T+ PA++ VP AT+ + +P AT+A+ + P+ LTP +T
Sbjct: 8 PAGGATSVPAAMPHRVPMATAPSRLP----------ATVAMALISTPSAAIRLTPINSVT 57
Query: 420 RIL*FSITALNLSGSRLVPASNVTKAVANSLTC 322
+ A G V A A++L C
Sbjct: 58 HFDVLRLRARRTDGEDDVSALPEIDGAASALPC 90
>01_05_0423 + 22032940-22033695
Length = 251
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 83 EESVADGTKCELTDSPTWIIDPVDGTMNFVHG 178
EE D K + +S W+IDP+ G V G
Sbjct: 90 EELRDDAMKSVVYESDAWVIDPLGGAAGIVKG 121
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -2
Query: 603 SNGPPAGSMTTPPASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEPNVLTPCPLL 424
S PP+G TPP+ + + P + P + +S+PP A S+ P +P P
Sbjct: 821 SPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSSPPPE--AHVSSPPPPEKSPPPPE 878
Query: 423 TR 418
T+
Sbjct: 879 TK 880
>11_02_0106 - 8358372-8360120
Length = 582
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 356 FEAGTSRDPERFKAVMENYKILVSKGHGV 442
FEAG D ER + VM+ ++ + GH +
Sbjct: 542 FEAGMLEDAERIRGVMKEMELKKTAGHSL 570
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = -2
Query: 594 PPAGSMTTPPASLTKTVPAATSQA*IPNSK*ASAPPKATIAIFSAAEPNVLTPCPLLTRI 415
PP+ TTPPA P T+ P + A +PP + A P L P P L I
Sbjct: 32 PPSLPTTTPPAPTVVAPPLPTTP---PPAVVAPSPPLPPLTPPPAIVPPALPPPPPLPAI 88
Query: 414 L 412
+
Sbjct: 89 V 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,009,563
Number of Sequences: 37544
Number of extensions: 362236
Number of successful extensions: 1037
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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