Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28k14
(333 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 31 0.36
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 29 1.9
AE014134-2454|AAF53369.2| 270|Drosophila melanogaster CG16880-P... 29 1.9
BT021215-1|AAX33363.1| 399|Drosophila melanogaster RH65810p pro... 27 4.4
AE014298-2043|AAN09339.1| 541|Drosophila melanogaster CG9413-PB... 27 4.4
AE014298-2042|AAF48379.2| 532|Drosophila melanogaster CG9413-PA... 27 4.4
AE014296-1291|AAS65059.1| 1577|Drosophila melanogaster CG7526-PB... 27 4.4
AE014296-1290|AAF50538.3| 1577|Drosophila melanogaster CG7526-PA... 27 4.4
Y11128-1|CAA72010.1| 403|Drosophila melanogaster C901 protein p... 27 7.8
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 27 7.8
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 27 7.8
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 27 7.8
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 27 7.8
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 27 7.8
AE014298-1533|AAF47984.1| 559|Drosophila melanogaster CG1567-PA... 27 7.8
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 31.1 bits (67), Expect = 0.36
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 107 IPACRPNRCK-PCPSYCTEPAVCK 175
+ C NRCK PCP C AVC+
Sbjct: 15986 VHVCSNNRCKDPCPGLCGTDAVCR 16009
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 113 ACRPNRC-KPCPSYCTEPAVCK 175
AC NRC PCP C AVC+
Sbjct: 11929 ACMRNRCVDPCPGICGNNAVCE 11950
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +2
Query: 113 ACRPNRC-KPCPSYCTEPAVC 172
AC ++C PCP C E A+C
Sbjct: 13208 ACHSSKCVNPCPGTCGENAIC 13228
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 113 ACRPNRC-KPCPSYCTEPAVCKPQR 184
AC N+C PCP C A+C+ R
Sbjct: 17053 ACVRNKCIDPCPGTCGSNAICEVHR 17077
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +2
Query: 113 ACRPNRCK-PCPSYCTEPAVCK 175
AC RC PCP C A+CK
Sbjct: 10752 ACVNQRCADPCPGTCGNEAICK 10773
Score = 27.5 bits (58), Expect = 4.4
Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +2
Query: 113 ACRPNRC-KPCPSYCTEPAVC 172
AC N+C PCP C A+C
Sbjct: 15117 ACSRNKCFDPCPGTCAPNAIC 15137
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 83 ILVYDTIAIPACRPNRCK-PCPSYCTEPAVC 172
+L D + AC+ +C+ PCP C + A+C
Sbjct: 14789 VLNSDCPSNKACQQQKCQDPCPGTCGQNALC 14819
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 113 ACRPNRCK-PCPSYCTEPAVCK 175
AC+ +C+ PCP C A+C+
Sbjct: 16733 ACQQQKCRDPCPGVCALNALCR 16754
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 113 ACRPNRCK-PCPSYCTEPAVCK 175
+C RCK PCP C A+C+
Sbjct: 10432 SCLNERCKDPCPGTCGNNALCR 10453
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 43 PSM*KTGYLQTRSNTSLRHHSDSSMQAEPLQALPVVL 153
P+ K G + T N+SLRH + ++ E +Q+ P+VL
Sbjct: 78 PASSKRGGVATIVNSSLRHMALEPIEKECIQSAPIVL 114
>AE014134-2454|AAF53369.2| 270|Drosophila melanogaster CG16880-PA
protein.
Length = 270
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +2
Query: 92 YDTIAIPACRPNRCKPCP--SYCTEPAVCKPQR 184
Y TI C P + CP SYC EP C QR
Sbjct: 131 YRTILFGFCEPVCQEACPAHSYCAEPDRCHCQR 163
>BT021215-1|AAX33363.1| 399|Drosophila melanogaster RH65810p
protein.
Length = 399
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 174 LQTAGSVQYDGQGLQR-FGLHAGIAMVS*TSIGSGLQVT 61
L+ GS Q L+R GL +G+A++ T IGSG+ V+
Sbjct: 58 LERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVS 96
>AE014298-2043|AAN09339.1| 541|Drosophila melanogaster CG9413-PB,
isoform B protein.
Length = 541
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 174 LQTAGSVQYDGQGLQR-FGLHAGIAMVS*TSIGSGLQVT 61
L+ GS Q L+R GL +G+A++ T IGSG+ V+
Sbjct: 67 LERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVS 105
>AE014298-2042|AAF48379.2| 532|Drosophila melanogaster CG9413-PA,
isoform A protein.
Length = 532
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 174 LQTAGSVQYDGQGLQR-FGLHAGIAMVS*TSIGSGLQVT 61
L+ GS Q L+R GL +G+A++ T IGSG+ V+
Sbjct: 58 LERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVS 96
>AE014296-1291|AAS65059.1| 1577|Drosophila melanogaster CG7526-PB,
isoform B protein.
Length = 1577
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 233 C*VRNHPYRQVLLDSCN-VAACRQLVRYNTTGRACNG-SACMLESLWCRRLVLDL 75
C V N+ Q+ L + V ACR+ R + G++C C++ + C+++ +L
Sbjct: 555 CEVNNNGCEQICLTARGGVCACREGFRLSADGKSCEDVDECLVNNGGCQQVCRNL 609
>AE014296-1290|AAF50538.3| 1577|Drosophila melanogaster CG7526-PA,
isoform A protein.
Length = 1577
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 233 C*VRNHPYRQVLLDSCN-VAACRQLVRYNTTGRACNG-SACMLESLWCRRLVLDL 75
C V N+ Q+ L + V ACR+ R + G++C C++ + C+++ +L
Sbjct: 555 CEVNNNGCEQICLTARGGVCACREGFRLSADGKSCEDVDECLVNNGGCQQVCRNL 609
>Y11128-1|CAA72010.1| 403|Drosophila melanogaster C901 protein
protein.
Length = 403
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 95 DTIAIPACRPNRCKPCPSYCTEPAVCK 175
D +P CR C P YC P C+
Sbjct: 77 DLCQVPMCRRG-CDPMNGYCQRPGECR 102
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 55 KTGYLQTRSNTSLRHHSDSSMQAEPLQALPVVL 153
K G + T N+S+RH + ++ E +Q+ P+VL
Sbjct: 70 KRGGVATIVNSSIRHMALKPIEKECIQSAPIVL 102
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 55 KTGYLQTRSNTSLRHHSDSSMQAEPLQALPVVL 153
K G + T N+S+RH + ++ E +Q+ P+VL
Sbjct: 70 KRGGVATIVNSSIRHMALEPIEKECIQSAPIVL 102
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 55 KTGYLQTRSNTSLRHHSDSSMQAEPLQALPVVL 153
K G + T N+S+RH + ++ E +Q+ P+VL
Sbjct: 70 KRGGVATIVNSSIRHMALEPIEKECIQSAPIVL 102
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 55 KTGYLQTRSNTSLRHHSDSSMQAEPLQALPVVL 153
K G + T N+S+RH + ++ E +Q+ P+VL
Sbjct: 32 KRGGVATIVNSSIRHMALEPIEKECIQSAPIVL 64
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 55 KTGYLQTRSNTSLRHHSDSSMQAEPLQALPVVL 153
K G + T N+S+RH + ++ E +Q+ P+VL
Sbjct: 70 KRGGVATIVNSSIRHMALEPIEKECIQSAPIVL 102
>AE014298-1533|AAF47984.1| 559|Drosophila melanogaster CG1567-PA
protein.
Length = 559
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 95 DTIAIPACRPNRCKPCPSYCTEPAVCK 175
D +P CR C P YC P C+
Sbjct: 77 DLCQVPMCRRG-CDPMNGYCQRPGECR 102
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,285,976
Number of Sequences: 53049
Number of extensions: 251055
Number of successful extensions: 884
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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