Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28k12
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0172 - 13072575-13073800,13075919-13076054 32 0.50
01_06_0892 + 32763195-32764149,32764489-32764575,32764665-327648... 32 0.50
03_06_0195 + 32256771-32258792 30 1.5
11_06_0479 + 24076860-24077809,24078700-24079321 30 2.0
11_08_0035 - 27838495-27838655,27838750-27838897,27838987-278391... 29 2.7
11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363 29 2.7
03_06_0146 - 31976538-31978643,31978653-31978751 29 2.7
11_01_0056 + 427376-427408,427589-427694,427777-427823,427907-42... 29 3.5
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 29 3.5
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 29 3.5
09_04_0298 + 16475693-16475849,16476148-16476265,16476364-164764... 29 4.7
11_01_0635 - 5091381-5091562,5092800-5092866,5093079-5093960 28 6.2
06_03_1276 - 28907726-28907842,28908012-28908062,28908146-289082... 28 8.1
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645... 28 8.1
06_01_0996 + 7746358-7746493,7747102-7747262,7747586-7747647,774... 28 8.1
01_05_0024 - 17262504-17263308,17264251-17264399,17264879-172649... 28 8.1
>09_03_0172 - 13072575-13073800,13075919-13076054
Length = 453
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/73 (21%), Positives = 37/73 (50%)
Frame = +3
Query: 15 NVFYELEQKNGKSRQTKTVFTVADSEDIMYTAINIFNSQDIDCECDNDNSIVNEERDQDY 194
N+ + N K ++ T+ + +++ N+ ++ D D D SI +E+ + D+
Sbjct: 47 NMLAHSTETNKKGQEYSTLLDPKFAPVLLFVDYNLDDTHDEVNSEDEDYSIEDEDEELDH 106
Query: 195 NEDNYSNSDIANH 233
+DN + DI+++
Sbjct: 107 EDDNSFDEDISDN 119
>01_06_0892 +
32763195-32764149,32764489-32764575,32764665-32764829,
32764904-32766219
Length = 840
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/86 (18%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +3
Query: 102 YTAINIFNSQDIDCECDNDNSIVNEER----DQDYNEDNYSNSDIANHSYTIAEELVSEL 269
Y+ + + + + + C +D I + + ++D NED + A+ + + ++
Sbjct: 202 YSVLQMTSGSEDEAPCADDGKISHHHKTNCMEEDLNEDATAEKFAASSTELVRPLEMNVP 261
Query: 270 VDTSTGESKDLNVAFVNTRDDHDAVL 347
++T G+S D+++ +V D D+++
Sbjct: 262 METDVGDSYDISLPYVLVDDHPDSII 287
>03_06_0195 + 32256771-32258792
Length = 673
Score = 30.3 bits (65), Expect = 1.5
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Frame = +3
Query: 84 DSEDIMYTAINIFNSQD-IDCECDNDNSI---VNEERDQDYNEDNYSNSDIANHSYTIAE 251
D E + F+ +D I E +D S+ ++E + D ED+YS+ +I + + +
Sbjct: 239 DDESLDDDGSECFDEEDKIGTENPDDESVDTGSSDEEESDDEEDSYSDEEIDDEEESDCD 298
Query: 252 ELVSELVDTSTGESKDLNVAFVNTRDDHDAVLN-SFGGTSKILSMSLTENS----GGIKY 416
E + E + G +K +DA+ N SFG + S E G+
Sbjct: 299 EEIDEEEEEEHGGNK------------YDAIDNESFGEEESCMEQSDAEEEWPEFTGVP- 345
Query: 417 WISFDDCDTTEDIQFGFRRRSTEMPSFIVIDSKIEKRVTKNHSSDNEGESND 572
+S++D DT D++ + I +S E+ + SD+E E +
Sbjct: 346 -VSYNDIDTDSDMEIDGGKYDD-----IDSESLYEEESVSDEQSDDEEEPEE 391
>11_06_0479 + 24076860-24077809,24078700-24079321
Length = 523
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +3
Query: 72 FTVADSEDIMYTAINIFNSQDIDCECDNDNSIVNEERDQDYNEDNYSNSDIANHSY 239
+TV ++ M+ + +++D + + DND+ + E R+++Y++D + H Y
Sbjct: 404 WTVEENSTGMHGNRDTLSAEDFEWDSDNDDFLAVEVRNEEYDDDCEHFDILGFHPY 459
>11_08_0035 - 27838495-27838655,27838750-27838897,27838987-27839192,
27839291-27839972,27840074-27840247,27840963-27841181,
27841281-27841400,27841540-27841680,27841762-27841801,
27841969-27842129,27842506-27842589,27842659-27842721,
27842808-27842885,27842980-27842984,27843228-27843313,
27843354-27843544,27844089-27844166,27844255-27844365,
27844757-27844927,27845026-27845198,27845748-27845928
Length = 1090
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +3
Query: 126 SQDIDCECDNDNSIVNEERDQDYNEDNYSNSDIANHSYTIAEELVSELVDTSTGESKDL 302
++D+D + D++ +E D+DYN+D+ + D+ + EE + + GES ++
Sbjct: 968 AEDLDDDDDDEEEEDTDEDDEDYNQDS-DDDDVREET---EEEFLQRYAAAAGGESIEI 1022
>11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363
Length = 394
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 117 IFNSQDIDCECDNDNSIVNEERDQDYNEDNYSN 215
+F+ ++I+ +++N EE D+D +ED+Y N
Sbjct: 322 VFSFEEIEILEEDENDQDEEEEDEDEDEDSYEN 354
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 29.5 bits (63), Expect = 2.7
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 15/178 (8%)
Frame = +3
Query: 84 DSEDIMYTAINIFNSQDIDCECDNDNSIVNEE---------RDQDYNEDNYSNSDIANHS 236
D E + F+ +DI C + D+ I ++E + D ED+YS+ +I +
Sbjct: 292 DDESLDDDGSECFDEEDIICAENLDDEIFDDEYVDTGSSDEEESDDEEDSYSDEEIDDEE 351
Query: 237 YTIAEELVSELVDTSTGESKDLNVAFVNTRDDHDAVLN-SFGGTSKI-LSMSLTENS--- 401
+ +E + E + G +K +DA+ N SFG + + S E
Sbjct: 352 ESDCDEEIDEEEEEEHGGNK------------YDAIDNESFGEEESVCMEQSYAEEEWPE 399
Query: 402 -GGIKYWISFDDCDTTEDIQFGFRRRSTEMPSFIVIDSKIEKRVTKNHSSDNEGESND 572
G+ +S+DD DT D++ + I +S E+ + SD+E E +
Sbjct: 400 FTGVP--VSYDDIDTDSDMEIDGGKYDD-----IDSESLYEEESVSDEQSDDEEEPEE 450
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +3
Query: 84 DSEDIMYTAINIFNSQDIDCECDNDNSIVNE-ERDQDYNEDNYSNSDIANHS--YTIA-- 248
D +D I F+ D CE + D+ I ++ E + D ED+ +SD+ S YT +
Sbjct: 153 DLDDETDGDIECFDEDDGICEENPDDEIFDDDEEESDPEEDDTGSSDLETDSDEYTESTD 212
Query: 249 EELVSELVDTSTGES 293
EE E DT+ ES
Sbjct: 213 EESDYEEEDTTDLES 227
>11_01_0056 +
427376-427408,427589-427694,427777-427823,427907-428065,
429018-429092,429379-429973,430529-430943,431105-431118,
431476-431591
Length = 519
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 171 NEERDQDYNEDN-YSNSDIANHSYTIAEELVSELVDTSTGESKDLNVAFVNTRDDHDAVL 347
+EE D +++ED+ N D A +S +E L + S + K ++ + +D D
Sbjct: 87 DEEEDVNWDEDDTVDNFDRATYSDGSGDE--DFLQEMSEKDEKIKSLVSMGFPEDEDTEF 144
Query: 348 NSFGGTSK 371
+SFGG K
Sbjct: 145 SSFGGRKK 152
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = +3
Query: 78 VADSEDIMYTAINIFNSQDIDCECDNDNSIV--NEERDQDYNEDNYSNSDIANHSYTIAE 251
VAD E++ T + + +D D + D D ++E ++D +ED N D +
Sbjct: 228 VADEEEVEDTKEDEYTDEDGDSDDDEDEGEEDDDDEGEEDDDEDRSENDDEDGAETGRSG 287
Query: 252 ELVSELVDTSTGESKDLNVAFVNTRDDHDAVLNSFG 359
E D + + D N + D D V G
Sbjct: 288 EQADAATDVTGCKGDDTNEGIGSGGKDVDGVTECKG 323
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Frame = +3
Query: 78 VADSEDIMYTAINIFNSQDIDCECDND--NSIVNEERDQDYNEDNYSNSDIANHSYTIAE 251
VAD E++ T + + +D D + D D + ++E ++D +ED N D +
Sbjct: 530 VADEEEVEDTEEDEYTDEDGDSDDDEDEGDEDDDDEGEEDDDEDRSENDDDDGAKTGRSG 589
Query: 252 ELVSELVDTSTGESKDLNVAFVNTRDDHDAVLNSFG 359
E D + + D N + D D V G
Sbjct: 590 EQADAATDVTGCKGDDTNEGIGSGGKDVDGVTECKG 625
>09_04_0298 +
16475693-16475849,16476148-16476265,16476364-16476467,
16478794-16478808,16479276-16479481,16479567-16479719,
16479842-16480123
Length = 344
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 132 DIDCECDNDNSIVNEERDQDYNEDN 206
DID E D DN V E+ D D +++N
Sbjct: 320 DIDIEDDEDNDDVIEDNDDDNSDEN 344
>11_01_0635 - 5091381-5091562,5092800-5092866,5093079-5093960
Length = 376
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 150 DNDNSIVNEERDQDYNEDNYSNSDIANHSY 239
DND V E+ D+D +ED N D Y
Sbjct: 330 DNDQDEVEEDEDEDSHEDEDENEDSYGDPY 359
>06_03_1276 -
28907726-28907842,28908012-28908062,28908146-28908254,
28908345-28908430,28908537-28908650,28908731-28908790,
28909088-28909303,28909401-28909514,28910632-28910853,
28910946-28911050,28911136-28911276,28911368-28911472,
28911538-28911645,28911753-28911911,28912060-28912140,
28912219-28912330,28912433-28912515,28912631-28912669,
28913061-28913126,28913601-28913643,28913969-28914036,
28914264-28914323,28914409-28914529,28915167-28915267,
28915354-28915494
Length = 873
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +3
Query: 48 KSRQTKTVFTVADSEDIMYTAINIFNSQDIDCECDNDNSIVNEERDQDYNEDNYSNSDIA 227
KS + K +FT D + I + E D+D I +E +++ +D SN ++
Sbjct: 278 KSLELKPIFTATDDFQLKKQFAFIIARHGLSIEIDDD--IAADENEKEALQDIISNIKLS 335
Query: 228 NHSYTIAEEL 257
T+A ++
Sbjct: 336 EGYLTLARDI 345
>06_03_1108 -
27661916-27662812,27662889-27663529,27663613-27664592,
27664854-27664934,27668582-27668634,27669294-27669308,
27670069-27670296
Length = 964
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 312 FVNTRDDHDAVLNSFGGTSKILSMSLTENSGGIKYWISFDDCDTTEDIQF 461
F+ R HDA+L G +LS S SG + D+ T ED+ +
Sbjct: 580 FLEARATHDALLRDTGRRPFVLSRSTFVGSGRYTAHWTGDNAATWEDLHY 629
>06_01_0996 +
7746358-7746493,7747102-7747262,7747586-7747647,
7748142-7748595,7748994-7749134,7749444-7749633,
7749842-7750530,7750605-7750804,7751210-7751375,
7751850-7752046,7752162-7752396
Length = 876
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = +3
Query: 129 QDIDCECDNDNSIVNEERDQDYNEDNYSNSDIANHSYTIAEELVSELVDTSTGESKDLNV 308
+D+D +D V +E +D ED Y++ D + +E E D GE D
Sbjct: 379 EDLDVTSSDDEDFVADEEVEDTEEDEYTDEDGDSDD----DEDEGEEDDNDEGEEDDDED 434
Query: 309 AFVNTRDD 332
N DD
Sbjct: 435 RSENDDDD 442
>01_05_0024 -
17262504-17263308,17264251-17264399,17264879-17264978,
17265829-17265953,17267565-17267743,17269648-17270698
Length = 802
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 129 QDIDCECDNDNSIVNE-ERDQDYNEDNYSNSDIANHSYTIAEELV 260
++ + E D D I E E D D +ED+ S+ D H + EE+V
Sbjct: 140 EEDEVEDDADGHIRTESEDDDDDDEDDDSDDDHHEHDDVLVEEMV 184
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,121,725
Number of Sequences: 37544
Number of extensions: 307973
Number of successful extensions: 966
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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