Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28k12
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107480-1|AAI07481.1| 738|Homo sapiens GRAMD1B protein protein. 30 9.1
BC105932-1|AAI05933.1| 738|Homo sapiens GRAMD1B protein protein. 30 9.1
BC105931-1|AAI05932.1| 738|Homo sapiens GRAMD1B protein protein. 30 9.1
BC105741-1|AAI05742.1| 738|Homo sapiens GRAMD1B protein protein. 30 9.1
BC031039-1|AAH31039.1| 749|Homo sapiens EF-hand domain (C-termi... 30 9.1
AL359744-3|CAI40213.1| 777|Homo sapiens EF-hand domain (C-termi... 30 9.1
AL359744-2|CAI40212.1| 729|Homo sapiens EF-hand domain (C-termi... 30 9.1
AL133344-3|CAI42234.1| 777|Homo sapiens EF-hand domain (C-termi... 30 9.1
AL133344-2|CAI42233.1| 729|Homo sapiens EF-hand domain (C-termi... 30 9.1
AF217981-1|AAG17224.1| 271|Homo sapiens unknown protein. 30 9.1
AB033027-1|BAA86515.1| 761|Homo sapiens KIAA1201 protein protein. 30 9.1
>BC107480-1|AAI07481.1| 738|Homo sapiens GRAMD1B protein protein.
Length = 738
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 369 KILSMSLTENSGGIKYWISFDDCDTTEDIQFGFRRRSTEMPSFIVIDSKIEKRVTKNHSS 548
K ++ S ++G + +SFD E+ G E+ ++ KIE N S
Sbjct: 280 KSITNSTLTSTGSSEAPVSFDGLPLEEEALEGDGSLEKELAIDNIMGEKIEMIAPVNSPS 339
Query: 549 DNEGESNDIPFDLNAIGNDIDVPKKKCIYE-LRKREY 656
+ ++ DIP +L+ + D + + YE L R+Y
Sbjct: 340 LDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQY 376
>BC105932-1|AAI05933.1| 738|Homo sapiens GRAMD1B protein protein.
Length = 738
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 369 KILSMSLTENSGGIKYWISFDDCDTTEDIQFGFRRRSTEMPSFIVIDSKIEKRVTKNHSS 548
K ++ S ++G + +SFD E+ G E+ ++ KIE N S
Sbjct: 280 KSITNSTLTSTGSSEAPVSFDGLPLEEEALEGDGSLEKELAIDNIMGEKIEMIAPVNSPS 339
Query: 549 DNEGESNDIPFDLNAIGNDIDVPKKKCIYE-LRKREY 656
+ ++ DIP +L+ + D + + YE L R+Y
Sbjct: 340 LDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQY 376
>BC105931-1|AAI05932.1| 738|Homo sapiens GRAMD1B protein protein.
Length = 738
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 369 KILSMSLTENSGGIKYWISFDDCDTTEDIQFGFRRRSTEMPSFIVIDSKIEKRVTKNHSS 548
K ++ S ++G + +SFD E+ G E+ ++ KIE N S
Sbjct: 280 KSITNSTLTSTGSSEAPVSFDGLPLEEEALEGDGSLEKELAIDNIMGEKIEMIAPVNSPS 339
Query: 549 DNEGESNDIPFDLNAIGNDIDVPKKKCIYE-LRKREY 656
+ ++ DIP +L+ + D + + YE L R+Y
Sbjct: 340 LDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQY 376
>BC105741-1|AAI05742.1| 738|Homo sapiens GRAMD1B protein protein.
Length = 738
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 369 KILSMSLTENSGGIKYWISFDDCDTTEDIQFGFRRRSTEMPSFIVIDSKIEKRVTKNHSS 548
K ++ S ++G + +SFD E+ G E+ ++ KIE N S
Sbjct: 280 KSITNSTLTSTGSSEAPVSFDGLPLEEEALEGDGSLEKELAIDNIMGEKIEMIAPVNSPS 339
Query: 549 DNEGESNDIPFDLNAIGNDIDVPKKKCIYE-LRKREY 656
+ ++ DIP +L+ + D + + YE L R+Y
Sbjct: 340 LDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQY 376
>BC031039-1|AAH31039.1| 749|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 749
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 27 ELEQKNGKSRQTKTVFTVADSEDIMYTAINIF 122
+L+Q+ GKSR+ K VF ADS+ N F
Sbjct: 552 KLKQEEGKSRELKQVFKAADSKHTNMVDYNTF 583
>AL359744-3|CAI40213.1| 777|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 777
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 27 ELEQKNGKSRQTKTVFTVADSEDIMYTAINIF 122
+L+Q+ GKSR+ K VF ADS+ N F
Sbjct: 580 KLKQEEGKSRELKQVFKAADSKHTNMVDYNTF 611
>AL359744-2|CAI40212.1| 729|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 729
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 27 ELEQKNGKSRQTKTVFTVADSEDIMYTAINIF 122
+L+Q+ GKSR+ K VF ADS+ N F
Sbjct: 532 KLKQEEGKSRELKQVFKAADSKHTNMVDYNTF 563
>AL133344-3|CAI42234.1| 777|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 777
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 27 ELEQKNGKSRQTKTVFTVADSEDIMYTAINIF 122
+L+Q+ GKSR+ K VF ADS+ N F
Sbjct: 580 KLKQEEGKSRELKQVFKAADSKHTNMVDYNTF 611
>AL133344-2|CAI42233.1| 729|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 729
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 27 ELEQKNGKSRQTKTVFTVADSEDIMYTAINIF 122
+L+Q+ GKSR+ K VF ADS+ N F
Sbjct: 532 KLKQEEGKSRELKQVFKAADSKHTNMVDYNTF 563
>AF217981-1|AAG17224.1| 271|Homo sapiens unknown protein.
Length = 271
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Frame = -3
Query: 675 QTEASYYTPFCAVHKYISSSAHRYHSQSHSNRKEYHSIRL------HCH 547
Q + +++ P C H ++ + H +HS+ +RK+ ++R+ HCH
Sbjct: 195 QGDQTHHHPGCHNHHHLEAQQHNHHSRPQGHRKQ-RALRIMAPKSGHCH 242
>AB033027-1|BAA86515.1| 761|Homo sapiens KIAA1201 protein protein.
Length = 761
Score = 29.9 bits (64), Expect = 9.1
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 369 KILSMSLTENSGGIKYWISFDDCDTTEDIQFGFRRRSTEMPSFIVIDSKIEKRVTKNHSS 548
K ++ S ++G + +SFD E+ G E+ ++ KIE N S
Sbjct: 303 KSITNSTLTSTGSSEAPVSFDGLPLEEEALEGDGSLEKELAIDNIMGEKIEMIAPVNSPS 362
Query: 549 DNEGESNDIPFDLNAIGNDIDVPKKKCIYE-LRKREY 656
+ ++ DIP +L+ + D + + YE L R+Y
Sbjct: 363 LDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQY 399
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,114,168
Number of Sequences: 237096
Number of extensions: 1594732
Number of successful extensions: 7669
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7655
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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