Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28k08
(602 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 29 0.40
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 29 0.40
SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces... 29 0.52
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 28 0.91
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 28 1.2
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 28 1.2
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 28 1.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 1.6
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 1.6
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 27 1.6
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 27 1.6
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 27 1.6
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.1
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 27 2.1
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 2.8
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 27 2.8
SPAC2F7.04 |pmc2|med1|RNA polymerase II holoenzyme mediator comp... 27 2.8
SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces... 26 3.7
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 26 3.7
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 26 3.7
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 26 3.7
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 4.9
SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 26 4.9
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 26 4.9
SPAC17G6.04c |cpp1||protein farnesyltransferase beta subunit Cpp... 26 4.9
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 26 4.9
SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog 1|Schizosa... 26 4.9
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 26 4.9
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 25 6.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 6.4
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 25 6.4
SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr 1||... 25 8.5
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c... 25 8.5
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 29.5 bits (63), Expect = 0.40
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +2
Query: 158 KRMTEKGFEGEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDE 331
K T G S S D SSL D F ++ N+E+E AE+D+E
Sbjct: 41 KNTTSSGSSESDSMSQNDKKKDSSLNESEDEDFAGFGESASENDELESAESEAENDEE 98
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 29.5 bits (63), Expect = 0.40
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +2
Query: 179 FEGEQSTSSWDVP-GPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSD 355
F STS+ D PSS A+ +++ + D + N+E+ +A + + + TS+
Sbjct: 409 FSSYSSTSNTDKSLRPSSYSAVSESS-NFTHDVSRDNKEISLNAPKSIIVSQSDSFDTSN 467
Query: 356 IASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSS 529
+ + N+ +P+S N+ + + P+ S P + P SSS+
Sbjct: 468 VTQDAPNDVEKEPISGQMPNNLSVQSLKQLEVYPIRHSVSIEMPSEKLLSPRLYSSST 525
>SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 366
Score = 29.1 bits (62), Expect = 0.52
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = +2
Query: 299 CDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNY-VNSTISNPTFDV--NLQPLSEP 469
CD+L + + + S +S LN+ P VS+ ++S + P+ + + L
Sbjct: 258 CDSLIEARPNTIHGVTESYFSS--LNDTFPSLVSTVVKMSSKLHVPSTEAICTICNLPMQ 315
Query: 470 SSAHTPVPEEYQPLPDSSSSI--ENAYYECLNNLDSNPGNRHMPDV 601
A T + + PDS I +N Y C +L S G H+PD+
Sbjct: 316 EDAETWLQKTTVEHPDSVEGIKNQNVCYGCSVSLKSLKGTLHIPDI 361
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 28.3 bits (60), Expect = 0.91
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Frame = +2
Query: 149 TLLKRMTEKGFEGEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDD 328
T + +++++GF S SS P +SL A +SS + Q + E+
Sbjct: 254 TDVNKISQQGFVEISSNSSKVTPN-TSLHQSFGIASSSSNNYMQTSSELTSSTEKMNGSH 312
Query: 329 EVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQP 508
+++ S ++ +++ + VS + S+ + P+S+PS +T + E+ +P
Sbjct: 313 PLQLSNKSLLSIHLMQSKNQGHVSMTGSDKLSSHVQSETENAPVSKPSKPNT-LTEDEKP 371
Query: 509 -----LPDSSSSIENAYYE 550
LP +S ++ Y E
Sbjct: 372 LQSTKLPGNSLTVGELYQE 390
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 449 LQPLSEPSSAHTPVPEEYQPLPDSSSSIENAY--YECLNNLDSNPGNRHMP 595
L+ LS+ P P YQ S++S+ NA+ Y+ ++ +D ++P
Sbjct: 385 LEDLSKHQDDIAPYPNPYQNYTTSNTSVVNAFEPYDTIDLVDGGEDRENIP 435
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 341 LPTSDIASNILNEQVPKPVSSNYVNSTISNP--TF-DVNLQPLSEPS 472
+PTS+ +S+I N + PVSS + +NP TF +L +S PS
Sbjct: 193 IPTSEASSSINNTPLQAPVSSFADQNAFTNPLSTFASPDLASVSSPS 239
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 449 LQPLSEPSSAHTPVPEEYQPLPDSSSSIENAY--YECLNNLDSNPGNRHMP 595
L+ LS+ P P YQ S++S+ NA+ Y+ ++ +D ++P
Sbjct: 385 LEDLSKHQDDIAPYPNPYQNYTTSNTSVVNAFEPYDTIDLVDGGEDRENIP 435
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 344 PTSDIASNILNEQVPKPVSS--NYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPD 517
P S + + N VP + S S+++ T + P S+ S AH P P P
Sbjct: 1481 PVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHP 1540
Query: 518 SSSSIENA 541
S++++ +A
Sbjct: 1541 SAAALSSA 1548
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.5 bits (58), Expect = 1.6
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = +2
Query: 272 NQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNL 451
N + E D F + DE T+ A+ I +P P S +++ + T ++
Sbjct: 11 NIEEKENSFFDVTFQDEPDE-----TTSTATGIAKVSIPTPKPSTPLSTLTNGSTIQQSM 65
Query: 452 QPLSEPSSAHTPVPEEYQPLPDSS 523
EP+S P+ + P+ D++
Sbjct: 66 TNQPEPTSQVPPISAK-PPMDDAT 88
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 27.5 bits (58), Expect = 1.6
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Frame = +2
Query: 194 STSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNIL 373
+++S D S +I DT+ SSA ++Q N +L + D+ P ++ SN
Sbjct: 431 NSTSLDADRDSDTSSISDTSSNSSAPHEQLN----ATSLASTVDESSRSPPLPEVESNKE 486
Query: 374 NEQVPKPV------SSNYVNSTISNPTFDVNLQPLSEPSS----AHTPVPEEYQPLPDSS 523
N+ K SS+ +S+ +N D +Q S + A +P+ P P S
Sbjct: 487 NDIKRKQPFHDLMDSSSPDDSSFANAKSDEEVQKPSVSKNIADGAVISIPKPLTPKPSDS 546
Query: 524 SSI 532
+S+
Sbjct: 547 NSL 549
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 27.5 bits (58), Expect = 1.6
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 332 VEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQP 457
V+ PTSD+ S + S N N+ IS TF +L P
Sbjct: 202 VDSFPTSDVRSLVAGTPATDDFSHNKPNNQISISTFYSSLDP 243
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 27.5 bits (58), Expect = 1.6
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 6/98 (6%)
Frame = +2
Query: 260 SSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQV---PKPVSSNYVNSTISN 430
S D EEM+ + F + + +L +S + EQ+ +P+SS + ++
Sbjct: 408 SPNDLTNGEEEMDTTSAFNIENSHLTLLSPIRPSSRSMEEQIMDLTQPISSTNAPTHLNE 467
Query: 431 PT---FDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIE 535
F N+ S+P + +P+PDS ++
Sbjct: 468 DDLNQFTSNISSSSKPRKDNNKTANSSKPIPDSEDFMD 505
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.1 bits (57), Expect = 2.1
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +2
Query: 224 SSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSS 403
+ +G D +F S +N +N E + + + PTS+ + +LNE VP+
Sbjct: 48 TQVGEDADNSFIS--ENTPKNT-FESTQTYENLESISKNEPTSEASKPLLNELVPE---- 100
Query: 404 NYVNSTISNPTFDVNLQPL-SEPSSAHTPVPEEYQPLP 514
+ P V +PL EP PVPEE PLP
Sbjct: 101 EPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEE--PLP 136
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 419 TISNPTFD--VNLQPLSEPSSAHTPVPEEYQPLP 514
T S+P+F L PLS PS H+ + QP+P
Sbjct: 67 TTSSPSFSHAAPLHPLSPPSFTHSQPQIQAQPVP 100
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 26.6 bits (56), Expect = 2.8
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +2
Query: 266 ADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDV 445
A + E E + +ES+DE T D + NE+ P N+T S T +
Sbjct: 675 ASETSESSEGEYETSTSESEDE----ETDDTSQEEDNEKNSTPDEDTENNNTSSISTKSI 730
Query: 446 NLQPLSEP 469
+PL+EP
Sbjct: 731 MDRPLTEP 738
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 26.6 bits (56), Expect = 2.8
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 314 AESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVP 493
AES + TS S +VP+ + ++VN T DVNL P S +S+ + +P
Sbjct: 489 AESTKIPKKQHTSAYESRAPQSKVPENLKESHVNETPYRGLHDVNL-PASGNASSVSAIP 547
Query: 494 EE 499
+
Sbjct: 548 PQ 549
>SPAC2F7.04 |pmc2|med1|RNA polymerase II holoenzyme mediator complex
subunit |Schizosaccharomyces pombe|chr 1|||Manual
Length = 454
Score = 26.6 bits (56), Expect = 2.8
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 362 SNILNEQVPKPVSSNYVNSTISN---PTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSI 532
+N EQ PV+ + I N P F+ N++ L+ + V + DS SS
Sbjct: 97 ANASGEQYNNPVAEKLLKDAIYNCNTPLFEKNVKWLATFDHSSPSVQQSCFQYLDSLSSS 156
Query: 533 ENAYYE 550
NA YE
Sbjct: 157 LNAIYE 162
>SPAC16C9.05 |||PHD finger containing protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/74 (22%), Positives = 30/74 (40%)
Frame = +2
Query: 320 SDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEE 499
S V + + + +NE P +N + S+ + T VN+ P+S+ P +
Sbjct: 9 SQPTVPSISNNSHGDSFVNEGPPSNFKNNSLTSSTHSSTDHVNVLPISQDKEMDISSPVK 68
Query: 500 YQPLPDSSSSIENA 541
Q S+ S A
Sbjct: 69 KQKASYSNKSPNKA 82
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 419 TISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIEN 538
T+S+PT+ +NL+ ++ VP++ +P S +N
Sbjct: 26 TLSDPTYPMNLEEKNQIPYRFQSVPDDVPEVPHIESRYKN 65
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Frame = +2
Query: 371 LNEQVPKPVSSNYVNSTISNPTFDVNLQP---------LSEPSSAHTPVPEEYQPLP 514
++E + ++ N +NS SN +F +QP L EP A+ PV + +P
Sbjct: 185 IDEYITWMITENLINSEPSNSSFSYEVQPSNYTTFCRMLDEPLPANNPVQSNSRLVP 241
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 284 NEEMECDALFAESDDEVEV-LPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVN 448
+E + D L AE +V LP D ++ VPK N+ + + +PTF +N
Sbjct: 781 SESTQLDQLLAEDSSTDDVSLPHLDTI-DLDGSPVPKVPDLNFSRANMDSPTFILN 835
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +2
Query: 392 PVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIENAYY 547
P+SS+ ++ ++S+PT + S S H V + S +E Y
Sbjct: 366 PISSSVISPSVSSPTSSILTNSGSIKSGDHQIVTTSFVQTTTHGSQVETLTY 417
>SPBC8D2.19 |mde3||serine/threonine protein kinase
Mde3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 4.9
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +2
Query: 335 EVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQ-PLSEPSSAHT 484
+V PT+ + P SN V ISNP + NL P+S T
Sbjct: 310 DVRPTAKYCKEVFFPLPPSASKSNSVPQKISNPKVEQNLGFPISREDKKST 360
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 518 SSSSIENAYYECLNNLDSNPGNRHMP 595
SSS++ YE L L+S PGN P
Sbjct: 83 SSSTLYATLYELLQKLNSGPGNPITP 108
>SPAC17G6.04c |cpp1||protein farnesyltransferase beta subunit
Cpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 382
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 193 VYVFLGRSRTVVSGCYS 243
+Y F GRS +V GCYS
Sbjct: 241 LYGFSGRSNKLVDGCYS 257
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.8 bits (54), Expect = 4.9
Identities = 22/100 (22%), Positives = 41/100 (41%)
Frame = +2
Query: 161 RMTEKGFEGEQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEV 340
R E +E E T++ + SSL +++ ++R E + + E D++VE+
Sbjct: 91 RTLESSYEDETETAN-KLSRVSSLVSVIRQTIDRKKSLERRVREEQEEKTDNEDDNDVEI 149
Query: 341 LPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPL 460
+ +N L E+ S + I F + Q L
Sbjct: 150 STQESLENNGLAEKKDDTSSLATLEDDIEGQEFSFDDQDL 189
>SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 941
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 155 LKRMTEKG-FEGEQSTSSWDVPGPSSLGAILDTAFTSSADNQQR 283
+K+ T+ F+ +ST+S+ +PG +SLG L+ +QR
Sbjct: 612 IKKFTQAVLFQSTKSTASFQLPGWTSLGMDLENTKLHIHQEEQR 655
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 413 NSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIENAY--YECLNNLDSNPGNR 586
NST+ + V + LSE + P P YQ ++++++N + ++ ++ +D +
Sbjct: 338 NSTLYDIIHKV-FEKLSEDQNDIAPYPNPYQNFTTTNTTVKNPFERFDTIDLVDGGEDDE 396
Query: 587 HMP 595
++P
Sbjct: 397 NIP 399
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
Frame = -1
Query: 338 PPLHHHSQQTK--HHTPFLHF 282
PP HH T+ HH P HF
Sbjct: 164 PPTQHHHPHTRPPHHPPHPHF 184
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 6.4
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 347 TSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEE 499
+S+ A + N+ P SS ST + PT N Q P P+P E
Sbjct: 466 SSEEAKSTTNDSSPPKDSS----STSTQPTEQSNAQQAPSPKEEERPLPSE 512
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 431 PTFDVNLQPLSEPSSAH-TPVPEEYQPLPDSSSSIENA 541
P + P+ PS+A P+P P+P SSS +A
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSA 1062
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +2
Query: 188 EQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASN 367
E +T +V PS I + F+ + E D E + T+D+ +N
Sbjct: 453 ESTTRKSEVEPPSPSKEIKSSHFSVPEFKFEPKTEATTDKKLNVPKFEFKPTATADVQTN 512
Query: 368 ILNEQVPKP 394
L E PKP
Sbjct: 513 RLKENEPKP 521
>SPAC823.09c |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 590 CVCCQD*SPSCLDIHNKRFQLS 525
C CC+ S +CL I NKR +S
Sbjct: 95 CNCCRHPSEACLYILNKRKVMS 116
>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 585
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 339 CYPHLILHQIYLTNRCPNQYHLTM*TQQSQIQHLMLT-YNHSQNLHQHILQCLKNINLYL 515
C L L + Y + P + S + ++ T Y N+H L+ ++INL L
Sbjct: 215 CIHILKLTEKYSSQNVPFDVYAAQIPHHSNLASVLATTYEALINMHTAYLEINQSINLSL 274
Query: 516 IVPAQLKT 539
+ P + T
Sbjct: 275 LWPMSVST 282
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,569,858
Number of Sequences: 5004
Number of extensions: 55311
Number of successful extensions: 261
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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