Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28k08
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          34   0.004
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         33   0.005
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    26   0.82 
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    25   2.5  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   3.3  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    24   4.4  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   5.8  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   7.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   7.6  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   7.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.6  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 33.9 bits (74), Expect = 0.004
 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
 Frame = +2

Query: 293 MECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVN-------- 448
           +  D+   E  ++ ++L TS I   +L+   P P SS+   + +S   F +         
Sbjct: 5   LNLDSYRHELYEQQQLLGTSPIQYTVLSMDTPSPSSSSAAAAVVSVGEFTLGPGRTYASA 64

Query: 449 LQPLSE------PSSAHTPVPEEYQPLPDSSSSIENAYYECLN-NLDSNPGNRHMP 595
           L P S       PSS  +P        P+SS+S ++A Y   N NL S+ G  + P
Sbjct: 65  LSPSSSSASPSSPSSVASPNSRASNMSPESSASDQSAAYTLQNLNLSSSAGTMNYP 120


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 33.5 bits (73), Expect = 0.005
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
 Frame = +2

Query: 215 PGPSSLGAILDTAFTSSADN----QQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQ 382
           PG S LG  +  A  +  D     +QR+EE E +A   E D+E E          I  E+
Sbjct: 346 PGSSQLGGPVSPASDAGYDRRVKQEQRDEEGELEAAEEEEDEEEE----------ISVEE 395

Query: 383 VPKPVSSNYVNSTISNPTFDVNLQPLSEPSSA 478
           V +PVS++  + + S   +D++ +  S+ +S+
Sbjct: 396 VDEPVSNHSASHSASEQAWDLSCRRSSDATSS 427



 Score = 26.6 bits (56), Expect = 0.62
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 362 MQYQMWVAPPLHHHSQQTKHHTPFL 288
           + YQ   A  +HHH     HH P L
Sbjct: 146 LHYQPAAAAAMHHHHHHPHHHHPGL 170


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 181 RRRTVYVFLGRSRTVVSGCYSGYC 252
           R + VY  L + RT   GCY G C
Sbjct: 483 RIKQVYQHLAKYRTPSGGCYEGDC 506



 Score = 23.0 bits (47), Expect = 7.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 353 QMWVAPPLHHHSQQTKHH 300
           +M++ PP HH S+  K H
Sbjct: 829 RMFLEPPKHHASRGAKPH 846


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 335 PLHHHSQQTKHHTPFLH 285
           P HHH QQ ++H    H
Sbjct: 25  PFHHHHQQQQNHQRMPH 41



 Score = 23.0 bits (47), Expect = 7.6
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 341 APPLHHHSQQTKHHTPFLHFSVDCQH 264
           +P  HHH QQ  H     H     QH
Sbjct: 24  SPFHHHHQQQQNHQRMPHHHQQQQQH 49


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 353 DIASNILNEQVPKPVSSNYV-NSTISNPTFDVNLQ--PLSEPSSAHTPVPEEYQPLPDSS 523
           ++ SN   +Q+    SSN + NS++ + +   +     +SEPS+A +P P     L D S
Sbjct: 173 ELPSNKQQQQLTSASSSNQLSNSSLCSASSGSSTYYGTMSEPSNASSPAPSH---LSDHS 229

Query: 524 S 526
           S
Sbjct: 230 S 230


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 425 SNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIENAYYECLNNLDSN 574
           S  TF+ NLQP+S        +PE+  P+ + +  I + +   ++  DSN
Sbjct: 140 SEITFNDNLQPVS--------LPEQDDPIEEGTMGIVSGWGMTMSAADSN 181


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +2

Query: 383 VPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSS 529
           VP P +++   ++   P         S+PSS   P      P+P S SS
Sbjct: 642 VPPPRTNSQSQASEPTPALPPRADRDSKPSSRDRPKDLPPPPIPASGSS 690


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 341 APPLHHHSQQTKHHT 297
           +PP HHHS Q+   T
Sbjct: 14  SPPHHHHSSQSPTST 28


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 341 APPLHHHSQQTKHHT 297
           +PP HHHS Q+   T
Sbjct: 14  SPPHHHHSSQSPTST 28


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 398 SSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDS 520
           SS+  +S+ S+ + + +    SE  S      E YQP+P+S
Sbjct: 459 SSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQPIPES 499


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 398 SSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDS 520
           SS+  +S+ S+ + + +    SE  S      E YQP+P+S
Sbjct: 459 SSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQPIPES 499


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,623
Number of Sequences: 2352
Number of extensions: 13451
Number of successful extensions: 57
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)