Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28k08
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82968-1|AAB40927.1| 281|Caenorhabditis elegans MAD-like-1 homo... 31 0.63
U40947-2|AAC48067.1| 281|Caenorhabditis elegans Mad-like protei... 31 0.63
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 31 0.84
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei... 31 0.84
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot... 31 0.84
U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical pr... 30 1.5
U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical pr... 30 1.5
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 30 1.5
U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone... 29 2.6
AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81017-12|CAD91635.1| 394|Caenorhabditis elegans Hypothetical p... 29 3.4
Z78537-3|CAD91626.1| 394|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 29 3.4
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 3.4
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83105-4|CAB05486.1| 280|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z75546-8|CAC42331.2| 640|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 28 5.9
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 5.9
AL132858-7|CAB60485.1| 107|Caenorhabditis elegans Hypothetical ... 28 5.9
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 28 5.9
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 28 5.9
Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 27 7.8
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 7.8
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 7.8
AF025450-4|AAO38668.1| 373|Caenorhabditis elegans Hypothetical ... 27 7.8
>U82968-1|AAB40927.1| 281|Caenorhabditis elegans MAD-like-1 homolog
protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +2
Query: 272 NQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNL 451
N R+E+ E A A+ + EV + A L++ P+ +S++ +++ + +
Sbjct: 159 NDLRDEQDELVAELAQLQADEEVAQATSQACQTLSQSRPESRASSFTSTSSRDSPCYLEY 218
Query: 452 QPLSEPSSAHTP 487
P S+P +H P
Sbjct: 219 SPSSKPMDSHKP 230
>U40947-2|AAC48067.1| 281|Caenorhabditis elegans Mad-like protein 1
protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +2
Query: 272 NQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNL 451
N R+E+ E A A+ + EV + A L++ P+ +S++ +++ + +
Sbjct: 159 NDLRDEQDELVAELAQLQADEEVAQATSQACQTLSQSRPESRASSFTSTSSRDSPCYLEY 218
Query: 452 QPLSEPSSAHTP 487
P S+P +H P
Sbjct: 219 SPSSKPMDSHKP 230
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 272 NQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSN 406
N+ R + + SDDE+EV+P + ++ EQ PK + N
Sbjct: 26 NRTRPAPTPIEYITLSSDDEIEVIPPPPKRAKMMEEQKPKDLLEN 70
>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
protein.
Length = 1908
Score = 30.7 bits (66), Expect = 0.84
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 47 CMFKYSPITNEMVNQPFLTQTVRVS*IIKVQYGITLL-KRMTEKGFEGEQSTSSWDVPGP 223
C FKY +T+E + T+ ++ YG +LL T GF S + + V G
Sbjct: 746 CEFKYGTVTHEKIAMRTSDDTITCDEMLFEPYGTSLLGSGSTPYGFNVIWSATGFAV-GK 804
Query: 224 SSLGAILDTAFTSSAD 271
S+ +LD + + D
Sbjct: 805 KSINRVLDNVASLAID 820
>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A
protein.
Length = 1951
Score = 30.7 bits (66), Expect = 0.84
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +2
Query: 47 CMFKYSPITNEMVNQPFLTQTVRVS*IIKVQYGITLL-KRMTEKGFEGEQSTSSWDVPGP 223
C FKY +T+E + T+ ++ YG +LL T GF S + + V G
Sbjct: 752 CEFKYGTVTHEKIAMRTSDDTITCDEMLFEPYGTSLLGSGSTPYGFNVIWSATGFAV-GK 810
Query: 224 SSLGAILDTAFTSSAD 271
S+ +LD + + D
Sbjct: 811 KSINRVLDNVASLAID 826
>U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical
protein F41C3.8a protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = +2
Query: 230 LGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNY 409
+GA + T S Q+ +M S E +LP+S ++ + N P P S
Sbjct: 1 MGAFGEMRHTPSPGTQKLRVDMSSSGSTPVSKVETPILPSSSMSQHPPNN--PFPRGSQS 58
Query: 410 VNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPL 511
NS+ S P VN S +S +P + +P+
Sbjct: 59 YNSSGSTP-LRVNTSNRSSANSQRPLLPPQDRPV 91
>U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical
protein F41C3.8b protein.
Length = 348
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = +2
Query: 230 LGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNY 409
+GA + T S Q+ +M S E +LP+S ++ + N P P S
Sbjct: 33 MGAFGEMRHTPSPGTQKLRVDMSSSGSTPVSKVETPILPSSSMSQHPPNN--PFPRGSQS 90
Query: 410 VNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPL 511
NS+ S P VN S +S +P + +P+
Sbjct: 91 YNSSGSTP-LRVNTSNRSSANSQRPLLPPQDRPV 123
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/118 (21%), Positives = 47/118 (39%)
Frame = +2
Query: 188 EQSTSSWDVPGPSSLGAILDTAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASN 367
EQ + D P P+ + + +T + A + E + V+ T++ AS
Sbjct: 201 EQEQGAGDAPEPAPV--VEETPAPTPAAEETPAPATEASNAVGTPEGYVD--GTANAASA 256
Query: 368 ILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIENA 541
+ V P + T + P P P++ TP PE P++++S ++A
Sbjct: 257 VAEPAVETPAPAPAAEETPA-PATSSEEAPAPAPTAEETPAPETVSAAPEAANSYDSA 313
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Frame = +2
Query: 194 STSSWDVPGPSSLGAILDTA--FTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASN 367
STS P S+ G+ + +A TSS+ + + P + +S
Sbjct: 635 STSMGPSPSQSTAGSTMTSAPPVTSSSSANTGSTSSGTTVSVQTTQVSSTTSPVASSSSQ 694
Query: 368 ILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSS 526
+ + Q P SS+ + ST++ + V QP + S + QP+ SS+
Sbjct: 695 MTSTQQPSGSSSS-IGSTVNQGSSSVTTQPPASSRSTASQGSSSAQPIASSST 746
>U23449-3|AAC24301.1| 579|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 22 protein.
Length = 579
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 344 PTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQP 457
P +D+ N + P P S + +S S+P++D+ QP
Sbjct: 12 PPTDLFKNTFEDVPPSPESLDVGDSLGSSPSYDLGFQP 49
>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
protein Y102A11A.3 protein.
Length = 1571
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 305 ALFAESDDEVE--VLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSA 478
A+ +SD+ + LPT + S + + P FD +LQ + EPSSA
Sbjct: 311 AVLEKSDENISWVQLPTFQLPSLFSKQPILPPNVKMESEKQEDEANFDYSLQSVPEPSSA 370
Query: 479 HTP 487
+ P
Sbjct: 371 YLP 373
>Z81017-12|CAD91635.1| 394|Caenorhabditis elegans Hypothetical
protein C09F12.3 protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 435 HLMLTYNHSQNLHQHILQC-LKNINLYLIVPAQLKTLIMN 551
H M+ Y H +H H L L+N+NL L++P + ++ N
Sbjct: 12 HSMVCY-HEPRIHDHELYFQLRNLNLLLLLPIAIGGILCN 50
>Z78537-3|CAD91626.1| 394|Caenorhabditis elegans Hypothetical
protein C09F12.3 protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 435 HLMLTYNHSQNLHQHILQC-LKNINLYLIVPAQLKTLIMN 551
H M+ Y H +H H L L+N+NL L++P + ++ N
Sbjct: 12 HSMVCY-HEPRIHDHELYFQLRNLNLLLLLPIAIGGILCN 50
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +2
Query: 248 TAFTSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTIS 427
TA ++ N+++ + C A+ A + S L P S+ ST +
Sbjct: 622 TASSALNKNKEKEKSPPCFAVTAAEAKGAAAVAKSKSRKKSLKNTPSVPTSTITTTSTTT 681
Query: 428 N-PTFDVNLQPLSEPSSAHTPVP 493
N PT Q S S+ H+P P
Sbjct: 682 NKPTSTSTKQTTSSSSTEHSPSP 704
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 350 SDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSS 523
S +S+ E + PVSSN +N T P N+ P +P + P P PLP +S
Sbjct: 163 SSSSSSSSGEAMDLPVSSNGMNVTAIPPPPSFNINPF-QPMFSQPPPP----PLPPNS 215
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 269 DNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVN 448
+ R ++E + +F S ++ ++ T D SN Q +P+ S +S S P F
Sbjct: 1287 EQSDRLNKLENERIFGTSPEKTPLIET-DFRSNFNMNQPSRPIPSQPPSSQYSPPVFAAP 1345
Query: 449 LQPLSEPSSAHT 484
P S+P+ T
Sbjct: 1346 -PPPSQPTRLPT 1356
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical protein
C52E12.4 protein.
Length = 1487
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 44 LCMFKYSPITNEMVNQP-FLTQTVRVS*IIKVQYGIT 151
L + +YSP+T +M N+P FL ++ + K+ Y ++
Sbjct: 1436 LPLMRYSPVTADMYNEPSFLRTPAHMTYLAKLMYSLS 1472
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +2
Query: 338 VLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPD 517
+ P++ S + Q P P S+ V S+ S+ + + PS+ P QP P
Sbjct: 442 ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPS 501
Query: 518 SSS 526
+S+
Sbjct: 502 TSN 504
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 344 PTSDIASNILNEQVPKPVSSNYVNST-ISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDS 520
P+ S+ + + PVS V+ +S P V+ P+S+P + PVP+ P +
Sbjct: 460 PSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPP--VSQPPVSQPPVSQPPVPQHPMTPPPA 517
Query: 521 SSS 529
SS+
Sbjct: 518 SSA 520
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 344 PTSDIASNILNEQVPKPVSSNYVNST-ISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDS 520
P+ S+ + + PVS V+ +S P V+ P+S+P + PVP+ P +
Sbjct: 524 PSHTAKSHTVKSPMTPPVSQPPVSQPPVSQPP--VSQPPVSQPPVSQPPVPQHPMTPPPA 581
Query: 521 SSS 529
SS+
Sbjct: 582 SSA 584
>Z83105-4|CAB05486.1| 280|Caenorhabditis elegans Hypothetical
protein F14H3.4 protein.
Length = 280
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 431 PTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSSIENAYYECLNNLDSNP 577
PTF +S+PS VPEE + +S +E+ E L + NP
Sbjct: 31 PTFQSFTNKMSDPSKNSEKVPEEQEIRDNSEEELEDEILEELER-ERNP 78
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 5.9
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = +2
Query: 257 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPT 436
T++A + +EE A+ S +E TS + E V NST P
Sbjct: 2838 TTAAATEASSEETTTSAVTEGSGEETT---TSAVTEGSGEETTTSAVPEGE-NSTTEAPA 2893
Query: 437 FDVNLQ---PLSEPSSA---HTPVPEEYQPLPDSSSSIEN 538
F + P SE SS+ H P P P SS+IEN
Sbjct: 2894 FVTGSEIEIPSSEESSSTTTHDPSIPVITPKPSVSSTIEN 2933
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 5.9
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = +2
Query: 257 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPT 436
T++A + +EE A+ S +E TS + E V NST P
Sbjct: 2838 TTAAATEASSEETTTSAVTEGSGEETT---TSAVTEGSGEETTTSAVPEGE-NSTTEAPA 2893
Query: 437 FDVNLQ---PLSEPSSA---HTPVPEEYQPLPDSSSSIEN 538
F + P SE SS+ H P P P SS+IEN
Sbjct: 2894 FVTGSEIEIPSSEESSSTTTHDPSIPVITPKPSVSSTIEN 2933
>Z75546-8|CAC42331.2| 640|Caenorhabditis elegans Hypothetical
protein R05D11.9 protein.
Length = 640
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 311 FAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTFDV 445
F++ DD V + +I+SNI++ P+S ++ NP D+
Sbjct: 11 FSQMDDVVSIC--REISSNIISTDKNVPISKMIIHKIFKNPHIDL 53
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 5.9
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = +2
Query: 257 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPT 436
T++A + +EE A+ S +E TS + E V NST P
Sbjct: 2838 TTAAATEASSEETTTSAVTEGSGEETT---TSAVTEGSGEETTTSAVPEGE-NSTTEAPA 2893
Query: 437 FDVNLQ---PLSEPSSA---HTPVPEEYQPLPDSSSSIEN 538
F + P SE SS+ H P P P SS+IEN
Sbjct: 2894 FVTGSEIEIPSSEESSSTTTHDPSIPVITPKPSVSSTIEN 2933
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 5.9
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = +2
Query: 257 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPT 436
T++A + +EE A+ S +E TS + E V NST P
Sbjct: 2838 TTAAATEASSEETTTSAVTEGSGEETT---TSAVTEGSGEETTTSAVPEGE-NSTTEAPA 2893
Query: 437 FDVNLQ---PLSEPSSA---HTPVPEEYQPLPDSSSSIEN 538
F + P SE SS+ H P P P SS+IEN
Sbjct: 2894 FVTGSEIEIPSSEESSSTTTHDPSIPVITPKPSVSSTIEN 2933
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 281 RNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPTF---DVNL 451
R+E E ++E++ + A +I +Q P V S+ +S +S+PT+ + L
Sbjct: 1065 RDELAEKQKAIDAQEEEIQTKWAALQARSIEQQQSPMHVRSSSSHSQVSSPTYKTPQIQL 1124
Query: 452 QPLSEPSSA 478
P S SS+
Sbjct: 1125 PPSSSASSS 1133
>AL132858-7|CAB60485.1| 107|Caenorhabditis elegans Hypothetical
protein Y113G7A.13 protein.
Length = 107
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/74 (20%), Positives = 36/74 (48%)
Frame = +2
Query: 350 SDIASNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEEYQPLPDSSSS 529
SD ++N ++ Q+ + +SN ++ L EP+ + P P + + +P+++
Sbjct: 14 SDFSNNEVSSQLLYQAKQGIEPNNVSNIRNELMRGQLGEPNENNRPPPVDRRDVPENNEL 73
Query: 530 IENAYYECLNNLDS 571
+ + L+NL +
Sbjct: 74 GKLPVHSTLDNLST 87
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 5.9
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = +2
Query: 257 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPT 436
T++A + +EE A+ S +E TS + E V NST P
Sbjct: 2838 TTAAATEASSEETTTSAVTEGSGEETT---TSAVTEGSGEETTTSAVPEGE-NSTTEAPA 2893
Query: 437 FDVNLQ---PLSEPSSA---HTPVPEEYQPLPDSSSSIEN 538
F + P SE SS+ H P P P SS+IEN
Sbjct: 2894 FVTGSEIEIPSSEESSSTTTHDPSIPVITPKPSVSSTIEN 2933
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 5.9
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = +2
Query: 257 TSSADNQQRNEEMECDALFAESDDEVEVLPTSDIASNILNEQVPKPVSSNYVNSTISNPT 436
T++A + +EE A+ S +E TS + E V NST P
Sbjct: 2838 TTAAATEASSEETTTSAVTEGSGEETT---TSAVTEGSGEETTTSAVPEGE-NSTTEAPA 2893
Query: 437 FDVNLQ---PLSEPSSA---HTPVPEEYQPLPDSSSSIEN 538
F + P SE SS+ H P P P SS+IEN
Sbjct: 2894 FVTGSEIEIPSSEESSSTTTHDPSIPVITPKPSVSSTIEN 2933
>Z92834-1|CAB07382.1| 564|Caenorhabditis elegans Hypothetical
protein F39B2.1 protein.
Length = 564
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 341 APPLHHHSQQTKHHTPFLHFSVDCQ 267
APP HHH LH+ +D Q
Sbjct: 46 APPHHHHHHHQHQPQQHLHYMIDSQ 70
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 371 LNEQVPKPVSSNYVNSTISNPTFDVNLQ-PLSEPSSAHTPVPEEYQPLPDSSS 526
L Q+ K NY S P +L P+S P ++ P E+ P SSS
Sbjct: 421 LARQIVKDAGYNYAKSR-KRPCDPADLHSPISSPGNSPPPQESEFDEQPSSSS 472
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 317 ESDDEVEVLPTSDIASNI--LNEQV--PKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHT 484
+ D++ E +PT D+A ++ +E+V + V S V P Q EP
Sbjct: 1242 QMDEDCEAVPTIDVADDLESKSEEVNEEEVVESEEVQQDAKEPEKTEKRQEEPEPEVMQP 1301
Query: 485 PVPEEYQ 505
+PEE Q
Sbjct: 1302 VIPEEPQ 1308
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 362 SNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEE 499
S + ++ P P S + V I T + EP +H+PVP E
Sbjct: 4726 SQVQRDESPAP-SEDSVKHVIEKTTTTTVTEERYEPEDSHSPVPSE 4770
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 362 SNILNEQVPKPVSSNYVNSTISNPTFDVNLQPLSEPSSAHTPVPEE 499
S + ++ P P S + V I T + EP +H+PVP E
Sbjct: 4726 SQVQRDESPAP-SEDSVKHVIEKTTTTTVTEERYEPEDSHSPVPSE 4770
>AF025450-4|AAO38668.1| 373|Caenorhabditis elegans Hypothetical
protein C41H7.3 protein.
Length = 373
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 243 WILPSHLVLTINREMKKWSVMLCLLRVMMKWRCYPHLILHQIYL 374
W+ + + I R+M K L L + KW YPH I ++ YL
Sbjct: 107 WLRRNLQLYIIQRKMDK----LTLDAELAKWELYPHFIYYRQYL 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,084,537
Number of Sequences: 27780
Number of extensions: 305366
Number of successful extensions: 1232
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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