Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28k06
(721 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein. 210 4e-54
BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protei... 210 4e-54
AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding prote... 210 4e-54
AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding prote... 210 4e-54
U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein ... 198 2e-50
AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding prote... 182 9e-46
AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding prote... 171 3e-42
BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein. 153 5e-37
AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens ... 153 5e-37
AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding prote... 102 1e-21
AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding prote... 95 2e-19
AF224249-1|AAO27475.1| 328|Homo sapiens HERC2 protein. 30 7.3
AF071172-1|AAD08657.1| 4834|Homo sapiens HERC2 protein. 30 7.3
>CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein.
Length = 472
Score = 210 bits (513), Expect = 4e-54
Identities = 98/185 (52%), Positives = 126/185 (68%), Gaps = 3/185 (1%)
Frame = +3
Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGV 326
GPGY++PL+A GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 327 TGDELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKM 506
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ +
Sbjct: 68 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 127
Query: 507 RS-FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKFG 683
+ +F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A G
Sbjct: 128 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLG 187
Query: 684 YDFWY 698
YDFWY
Sbjct: 188 YDFWY 192
>BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protein 1
protein.
Length = 472
Score = 210 bits (513), Expect = 4e-54
Identities = 98/185 (52%), Positives = 126/185 (68%), Gaps = 3/185 (1%)
Frame = +3
Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGV 326
GPGY++PL+A GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 327 TGDELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKM 506
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ +
Sbjct: 68 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 127
Query: 507 RS-FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKFG 683
+ +F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A G
Sbjct: 128 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLG 187
Query: 684 YDFWY 698
YDFWY
Sbjct: 188 YDFWY 192
>AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding protein
1 protein.
Length = 472
Score = 210 bits (513), Expect = 4e-54
Identities = 98/185 (52%), Positives = 126/185 (68%), Gaps = 3/185 (1%)
Frame = +3
Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGV 326
GPGY++PL+A GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 327 TGDELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKM 506
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ +
Sbjct: 68 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 127
Query: 507 RS-FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKFG 683
+ +F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A G
Sbjct: 128 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLG 187
Query: 684 YDFWY 698
YDFWY
Sbjct: 188 YDFWY 192
>AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding protein
1 protein.
Length = 349
Score = 210 bits (513), Expect = 4e-54
Identities = 98/185 (52%), Positives = 126/185 (68%), Gaps = 3/185 (1%)
Frame = +3
Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGV 326
GPGY++PL+A GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 51 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 109
Query: 327 TGDELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKM 506
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ +
Sbjct: 110 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 169
Query: 507 RS-FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKFG 683
+ +F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A G
Sbjct: 170 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLG 229
Query: 684 YDFWY 698
YDFWY
Sbjct: 230 YDFWY 234
>U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein
protein.
Length = 472
Score = 198 bits (483), Expect = 2e-50
Identities = 95/186 (51%), Positives = 123/186 (66%), Gaps = 4/186 (2%)
Frame = +3
Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGV 326
GPGY++PL+A GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 327 TGDELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKM 506
DELHHSGWN SSC ++ R+ L++P L S +Y VDVG++P +LHKVI+ +
Sbjct: 68 LKDELHHSGWNTYSSCFGDSTKSRNKLVLPSLISSRIYVVDVGSEPGPQKLHKVIEPKDI 127
Query: 507 RSFNCSFP--HTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKF 680
+ C HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A
Sbjct: 128 HA-KCELACLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPL 186
Query: 681 GYDFWY 698
GYDFWY
Sbjct: 187 GYDFWY 192
>AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding protein
1 protein.
Length = 295
Score = 182 bits (444), Expect = 9e-46
Identities = 90/183 (49%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Frame = +3
Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNKNKQDYLATVDVDSKSATYGQVIHRTYTGVTG 332
GPGY++PL+A DYLATVDVD KS Y QVIHR
Sbjct: 9 GPGYSTPLEAMKG---------------TEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 53
Query: 333 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 512
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 54 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 113
Query: 513 -FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKFGYD 689
+F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GYD
Sbjct: 114 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYD 173
Query: 690 FWY 698
FWY
Sbjct: 174 FWY 176
>AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding protein
1 protein.
Length = 201
Score = 171 bits (415), Expect = 3e-42
Identities = 87/176 (49%), Positives = 115/176 (65%), Gaps = 4/176 (2%)
Frame = +3
Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGV 326
GPGY++PL+A GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 327 TGDELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKM 506
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ +
Sbjct: 68 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 127
Query: 507 RS-FNCSFPHTTHCLATGEIMISTMGDENENGK-GDFVLIDSKTLEVTGTWTKGKN 668
+ +F HT+HCLA+GE+MIS++GD NGK G VL+ LE +G + N
Sbjct: 128 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKDGSLVLL--PRLECSGAISAHSN 181
>BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein.
Length = 408
Score = 153 bits (372), Expect = 5e-37
Identities = 66/123 (53%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Frame = +3
Query: 333 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 512
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 6 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 65
Query: 513 -FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKFGYD 689
+F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GYD
Sbjct: 66 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYD 125
Query: 690 FWY 698
FWY
Sbjct: 126 FWY 128
>AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ13813 fis, clone THYRO1000358, moderately
similar to SELENIUM-BINDING LIVER PROTEIN. ).
Length = 235
Score = 153 bits (372), Expect = 5e-37
Identities = 66/123 (53%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Frame = +3
Query: 333 DELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRS 512
DELHHSGWN CSSC ++ R L++P L S +Y VDVG++PR P+LHKVI+ + +
Sbjct: 6 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 65
Query: 513 -FNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKFGYD 689
+F HT+HCLA+GE+MIS++GD NGKG FVL+D +T EV GTW + A GYD
Sbjct: 66 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYD 125
Query: 690 FWY 698
FWY
Sbjct: 126 FWY 128
>AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding protein
1 protein.
Length = 126
Score = 102 bits (245), Expect = 1e-21
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = +3
Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVIHRTYTGV 326
GPGY++PL+A GPREE++Y+ C+ N + DYLATVDVD KS Y QVIHR
Sbjct: 36 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 94
Query: 327 TGDELHHSGWNVCSSCHDNAALKRDLLIMPGL 422
DELHHSGWN CSSC ++ R L++P L
Sbjct: 95 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSL 126
>AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding protein
1 protein.
Length = 305
Score = 95.1 bits (226), Expect = 2e-19
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +3
Query: 438 YAVDVGTDPRKPRLHKVIDGSKMRS-FNCSFPHTTHCLATGEIMISTMGDENENGKGDFV 614
Y V DP+ P+ +VI+ + + +F HT+HCLA+GE+MIS++GD NGKG FV
Sbjct: 65 YLATVDVDPKSPQYCQVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFV 124
Query: 615 LIDSKTLEVTGTWTKGKNHAKFGYDFWY 698
L+D +T EV GTW + A GYDFWY
Sbjct: 125 LLDGETFEVKGTWERPGGAAPLGYDFWY 152
Score = 60.9 bits (141), Expect = 4e-09
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Frame = +3
Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNKNKQ--DYLATVDVDSKSATYGQVI 305
GPGY++PL+A GPREE++Y+ C+ N + DYLATVDVD KS Y QVI
Sbjct: 31 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVI 82
>AF224249-1|AAO27475.1| 328|Homo sapiens HERC2 protein.
Length = 328
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 468 KPRLHKVIDGSKMRSFNCSFPHTTHCLATGEIMISTMGDENENGKGD 608
KPRL + + ++R C H+ ++GE+ +G+ G GD
Sbjct: 127 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 173
>AF071172-1|AAD08657.1| 4834|Homo sapiens HERC2 protein.
Length = 4834
Score = 30.3 bits (65), Expect = 7.3
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 468 KPRLHKVIDGSKMRSFNCSFPHTTHCLATGEIMISTMGDENENGKGD 608
KPRL + + ++R C H+ ++GE+ +G+ G GD
Sbjct: 3089 KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,994,280
Number of Sequences: 237096
Number of extensions: 2172598
Number of successful extensions: 4188
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4163
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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