Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28k06
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...   186   1e-47
Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical pr...    63   2e-10
AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical ...    28   5.8  

>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score =  186 bits (454), Expect = 1e-47
 Identities = 93/183 (50%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
 Frame = +3

Query: 153 GPGYASPLDAFNNGPREELLYVVCVRPNK-NKQDYLATVDVDSKSATYGQVIHRTYTGVT 329
           GPGYASP DA   GPREE+L+V    PN  +  D + TVDV+ +S T+ QVI R      
Sbjct: 12  GPGYASPADAIK-GPREEVLFVTA--PNAADGPDAIFTVDVNPESDTFCQVISRVDVPHI 68

Query: 330 GDELHHSGWNVCSSCHDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMR 509
           GDE+HH+GWN CSSCHD    KR  LI+P L+S  +Y ++V  + RK  L   I+ SK+ 
Sbjct: 69  GDEVHHTGWNACSSCHDKPTEKRSHLIVPCLNSDRIYIINVENE-RKIYLEHTIEPSKLH 127

Query: 510 SFNCSFPHTTHCLATGEIMISTMGDENENGKGDFVLIDSKTLEVTGTWTKGKNHAKFGYD 689
           S N SFPHT+HCLA G IMIST+G+ N    G+F+L+D KT E  GTW   +    F YD
Sbjct: 128 SLNLSFPHTSHCLADGNIMISTLGEANGTPSGNFLLLDGKTFEPKGTWPADEKTVPFNYD 187

Query: 690 FWY 698
           FWY
Sbjct: 188 FWY 190


>Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical
           protein R11G10.2 protein.
          Length = 576

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
 Frame = +3

Query: 201 EELLYVVCVRPNKN-KQDYLATVDVDSKSATYGQVIHRTYTGVTGDELHHSGW-NVCSSC 374
           +EL  +VC   +   ++D +A VD+D  S T+  ++   +    GDE     W     S 
Sbjct: 89  DELFAIVCCPHSIGYERDKIALVDLDPTSETFCTILSEVHLTSNGDEPGRMNWAKSAESL 148

Query: 375 HDNAALKRDLLIMPGLHSCNVYAVDVGTDPRKPRLHKVIDGSKMRSFNCSFPHTTHCLAT 554
            +     R  +I+P ++S  +Y +    +  K  + K I   ++   + S P+    L  
Sbjct: 149 GEMNKFVRRNIIVPCMNSGKIYVI--AFENEKLWIEKEIRNDELIRKDVSCPYAVRSLPL 206

Query: 555 --GEIMISTMGDENENGKGDFVLIDSKTLEV 641
               + +ST+GD   NGKGDF+LID +T EV
Sbjct: 207 KGAPVHVSTLGDRFGNGKGDFILIDRRTWEV 237


>AF125455-2|AAP13747.2|  431|Caenorhabditis elegans Hypothetical
           protein Y48A5A.1 protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
 Frame = +3

Query: 471 PRLHKVIDGSKMRSFN-CSFPHTTHCLATGEIMISTMGDENENGKGD---FVLIDSKTLE 638
           P++HK    S +        P TTH    G  ++  M D  ++ +GD   F++      E
Sbjct: 79  PKMHKKEHFSNLDMITELLTPSTTHHQPHGNQLVEEMDDSEDDDEGDGSEFLVEQQPAAE 138

Query: 639 VTGTWTKGKNHAKFGYDF 692
                + GK   KFGY F
Sbjct: 139 PEEPKSDGKIE-KFGYGF 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,653,980
Number of Sequences: 27780
Number of extensions: 352400
Number of successful extensions: 822
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)