Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28k04
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    25   2.1  
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         23   6.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.5  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 539 VNLSIFGLSKPRKLFSSFSIKLLVLSDRFVL 447
           +++ +F  +K RKL SS+ +  L LSD F L
Sbjct: 140 LSVLVFFKTKLRKLSSSYYLAALGLSDTFYL 170


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 197 TFCSDKLLFSFIFDSF 150
           TFCS +L+F   FD F
Sbjct: 38  TFCSGELIFEDTFDFF 53


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 295 EQEDKEADCEDVPILVERSKALHELIVSKKKSP 393
           EQ+      +++P    R + L EL V K K P
Sbjct: 797 EQDTPGETFDELPTASARPRRLSELSVKKSKKP 829


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,193
Number of Sequences: 2352
Number of extensions: 9880
Number of successful extensions: 68
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)