Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28k01
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    33   0.009
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    33   0.009
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.76 
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        24   4.1  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   5.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.4  
AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    24   5.4  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 33.1 bits (72), Expect = 0.009
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 536 GVERGDERVQRVREQHHERAHRQQVGGPAPA--ARRRLYEGPVAYRG 402
           G +R  E+ Q+ + QH ++   Q  GGP PA  A++R    P  + G
Sbjct: 466 GTDRHSEKQQQQQSQHQQQHQHQPGGGPLPAQSAKQRTKSKPAEHAG 512


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 33.1 bits (72), Expect = 0.009
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -1

Query: 536 GVERGDERVQRVREQHHERAHRQQVGGPAPA--ARRRLYEGPVAYRG 402
           G +R  E+ Q+ + QH ++   Q  GGP PA  A++R    P  + G
Sbjct: 466 GTDRHSEKQQQQQSQHQQQHQHQPGGGPLPAQSAKQRTKSKPAEHAG 512


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 358 PAAARAPPTLYTAPGPR*ATGPSYKRRRAAGAGPP 462
           P  ARAPP  +T PGP    GP    R  +    P
Sbjct: 375 PNPARAPPRNFTMPGP----GPGIGEREKSNPSRP 405


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 643 SPPRCTRCTSPCMRCTR 693
           SPP+ T CT+   RC R
Sbjct: 19  SPPKTTACTAGNKRCCR 35


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 457 GQRPLPAAACMRAPLPIAAP 398
           G R  P  A  +AP P+AAP
Sbjct: 719 GTRENPVDAAKKAPPPVAAP 738


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = -1

Query: 461 GGPAPAARRRLYEGPVAYRGPGAVYKVGGARAAAGPQQTQRV 336
           G P P   R  YEGP   +G        G R   GP+  Q V
Sbjct: 411 GAPGPKGPRG-YEGPQGPKGMDGFDGEKGERGQMGPKGGQGV 451


>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 248 LLPDLVNFFGLRFLRVQLRLSEGGMVSTHDHTRE 147
           L P L+ F G+  L   ++     ++S+H H RE
Sbjct: 223 LCPGLLKFTGINSLSPPMKKFTTEVISSHLHQRE 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,255
Number of Sequences: 2352
Number of extensions: 8925
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)