Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28j24
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0108 - 20912236-20912364,20912470-20912601,20912718-209130... 42 4e-04
06_03_0752 - 24171847-24174321 42 5e-04
07_03_0036 + 12694304-12694408,12694551-12694652,12694867-126949... 42 6e-04
03_02_0382 - 7958634-7959272,7959358-7959583,7959725-7959810,795... 41 8e-04
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 41 0.001
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 39 0.003
01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022... 39 0.003
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 39 0.004
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 38 0.010
09_02_0072 + 3895868-3895999,3897814-3897909,3898484-3898771 35 0.053
05_04_0073 + 17669311-17671635 35 0.053
06_03_1177 + 28174909-28175016,28176386-28176484,28177188-281772... 35 0.070
08_02_0098 - 12324664-12324822,12325430-12325543,12325649-123259... 33 0.28
07_01_1046 - 9138000-9138293,9139550-9139714,9139862-9140010,914... 31 0.66
05_04_0091 + 17839118-17839303,17840876-17840923,17841381-178415... 31 0.66
07_03_1784 - 29492511-29492804,29492913-29492999,29493076-294932... 31 0.87
04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617... 31 0.87
03_06_0619 - 35136435-35136728,35137155-35137358,35137476-351376... 31 1.1
09_06_0358 - 22504716-22505588 30 2.0
05_04_0314 - 20133281-20133824,20133911-20134991,20135116-20135488 30 2.0
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 30 2.0
02_04_0027 - 19014033-19014127,19014219-19014315,19014560-190146... 29 2.6
02_01_0149 + 1062044-1062997 29 2.6
01_06_1148 - 34895562-34895690,34896339-34896464,34896579-348969... 29 2.6
08_02_1102 + 24319569-24319917,24320120-24321496,24321819-243220... 29 3.5
05_04_0334 - 20341186-20341422,20341509-20341569,20341652-203417... 29 3.5
>09_06_0108 -
20912236-20912364,20912470-20912601,20912718-20913071,
20913161-20913407,20913489-20913565,20913971-20914045,
20914118-20914219,20914329-20914447,20914861-20914984,
20915081-20915131,20915247-20915345,20915839-20915949
Length = 539
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Frame = +1
Query: 406 VESANIKNSGLF-KPNPYLQV-IIDDKI-LRKTEVIRNTLHPKWKEDLTILVT-PQSQLL 573
+ + N++ L K +PY+++ + DDK+ +KT V R+ L+P+W ED +VT P++Q L
Sbjct: 267 LRAQNLRKKDLLGKSDPYVKLKMSDDKLPSKKTTVKRSNLNPEWNEDFKFVVTDPETQAL 326
Query: 574 -FRLADYHSFRKDNVIGEKKVNLLKVL 651
+ D+ K +G + LLK L
Sbjct: 327 EINVFDWEQVGKHEKMGMNNI-LLKEL 352
>06_03_0752 - 24171847-24174321
Length = 824
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 445 PNPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILVTP--QSQLLFRLADYHSFRKDNVI 618
P +++ + ++IL+ + V TL+P+W EDL +V + QLL + D + RKD+++
Sbjct: 257 PEVFVKAQVGNQILKTSVVAAPTLNPRWNEDLVFVVAEPFEEQLLLTVEDRVTPRKDDLL 316
Query: 619 GEKKVNL 639
G + L
Sbjct: 317 GRAALPL 323
>07_03_0036 +
12694304-12694408,12694551-12694652,12694867-12694947,
12696475-12696525,12697308-12697473,12698759-12698877,
12698975-12699073,12699684-12699764,12699845-12699927,
12701177-12701402,12704272-12704439,12706408-12706800
Length = 557
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = +1
Query: 361 TAPISVSTYHQLSLTVESA-NIKNSGLF-KPNPYLQVIIDDKILRKTEVIRNTLHPKWKE 534
T+ + + +L++TV A ++KN L K +PY+ + + KT+VI + L+P+W E
Sbjct: 295 TSELELKPQGRLTVTVVKATSLKNKELIGKSDPYVILYVRPMFKVKTKVIDDNLNPEWNE 354
Query: 535 DLTILVTPQ--SQLLFRLADYHSFRKDNVIGEKKV 633
++V + ++F + D ++D +G K+
Sbjct: 355 TFPLIVEDKETQSVIFEVYDEDRLQQDKKLGVAKL 389
>03_02_0382 -
7958634-7959272,7959358-7959583,7959725-7959810,
7959909-7959989,7960102-7960200,7960348-7960466,
7960557-7960677,7960831-7960881,7961041-7961142,
7962610-7962717,7962877-7962962,7963353-7963449
Length = 604
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +1
Query: 370 ISVSTYHQLSLTVESA-NIKNSGLF-KPNPYLQVIIDDKILRKTEVIRNTLHPKWKEDLT 543
+ + + +L++TV A ++KN L K +PY+ + I KT VI + L+P+W E +
Sbjct: 319 LELKPHGKLTVTVVRAESLKNKELIGKSDPYVVLYIRPMFKEKTSVIDDNLNPEWNETFS 378
Query: 544 ILVTPQ--SQLLFRLADYHSFRKDNVIGEKKVNL 639
++ + L+ ++ D ++D +G K+ L
Sbjct: 379 LIAEDKETQHLILQVFDEDKLKQDKRLGIAKLPL 412
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Frame = +1
Query: 424 KNSGLFKPNPYLQVIIDDKIL--RKTEVIRNTLHPKWKEDLTILV-TPQSQLL-FRLADY 591
K L K +PY+++ + ++ L +KT V R+ L+P+W ED ++V P+SQ L + D+
Sbjct: 361 KKDFLGKSDPYVKLKLTEEKLPSKKTSVKRSNLNPEWNEDFKLVVKDPESQALELTVYDW 420
Query: 592 HSFRKDNVIGEKKVNLLKVL 651
K + IG + L +++
Sbjct: 421 EQVGKHDKIGMSVIPLKELI 440
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +1
Query: 436 LFKPNPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILVTPQ--SQLLFRLADYHSFRKD 609
+ +PY+ + + + KT+VI++ L+P W E LT+ V PQ L ++ D+ +D
Sbjct: 983 ILSSDPYVVLTLGQQ-KAKTKVIKSNLNPVWNEVLTLSV-PQKYGPLKLQVYDHDVLSRD 1040
Query: 610 NVIGEKKVNL 639
+++GE +V+L
Sbjct: 1041 DIMGEAEVDL 1050
>01_06_1149 -
34901338-34901466,34901707-34901838,34901940-34902290,
34902301-34902619,34902756-34902784,34903641-34903715,
34903799-34903900,34904002-34904120,34904752-34904875,
34904976-34905026,34905143-34905241,34905751-34905861
Length = 546
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +1
Query: 334 TMNENISSLTAPISVSTYHQLSLTVESANIKNSGLF-KPNPYLQVII-DDKI-LRKTEVI 504
T+ + ++S+ + V L + + N++ L K +PY+++ + DDK+ +KT V
Sbjct: 229 TIKKQVASIASKRPVGIL--LVKVLRAQNLQKKDLLGKSDPYVKLTMSDDKLPSKKTTVK 286
Query: 505 RNTLHPKWKEDLTILVT-PQSQLL 573
R L+P+W ED +VT P++Q L
Sbjct: 287 RGNLNPEWNEDFKFVVTDPETQEL 310
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 433 GLFKPNPYLQVIIDDKILRKTEVIRNTLHPKWKEDL 540
G NPY ++I +KT+VI+ P+W+E++
Sbjct: 440 GKHHTNPYARIIFKGNE-KKTKVIKKNRDPRWEEEI 474
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 406 VESANIKNSGLFKPNPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILV-TPQSQLLFRL 582
+ N+ + +PY+ + + + + KT+VI+++L+P W E + + + P L ++
Sbjct: 232 IRGTNLAVRDMMSSDPYVILNLGHQSM-KTKVIKSSLNPVWNERILLSIPDPIPMLKLQV 290
Query: 583 ADYHSFRKDNVIGEKKVNL 639
D +F D+ +GE ++N+
Sbjct: 291 YDKDTFTTDDRMGEAEINI 309
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 418 NIKNSGLFKPNPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILVTPQ-SQLLFRLADYH 594
N+ + +PY+ + + + +T VI+ L+P W E+L + V Q L ++ D+
Sbjct: 155 NLAIRDMSSSDPYVVLTLGQQ-KAQTSVIKANLNPVWNEELKLSVPQQYGPLKLQVFDHD 213
Query: 595 SFRKDNVIGEKKVNL 639
KD+++GE +++L
Sbjct: 214 MLSKDDLMGEAEIDL 228
>09_02_0072 + 3895868-3895999,3897814-3897909,3898484-3898771
Length = 171
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 448 NPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILV-TPQSQLLFRLADYHSFRKDNVIGE 624
+PY+ V + + +KT+VI + L+P W E+++ + P + F + D+ F+ D+ +G
Sbjct: 34 DPYVVVRLA-AMNKKTKVINSCLNPVWNEEMSFSIEEPAGVIKFEVFDWDRFKYDDKMGH 92
Query: 625 KKVNLLKV 648
+ L V
Sbjct: 93 AFLELQPV 100
>05_04_0073 + 17669311-17671635
Length = 774
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 445 PNPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILVTP--QSQLLFRLADYHSFRKDNVI 618
P+ Y++ ++ ++ LR TL+P W EDL + + L+ + D + KD+V+
Sbjct: 222 PDVYVKAMLGNQALRTRVSPSRTLNPMWNEDLMFVAAEPFEEHLILSVEDRIAPGKDDVL 281
Query: 619 GEKKVNLLKV 648
G ++L V
Sbjct: 282 GRTIISLQHV 291
>06_03_1177 +
28174909-28175016,28176386-28176484,28177188-28177238,
28177394-28177517,28177765-28177883,28177954-28178055,
28178124-28178198,28178390-28178466,28178920-28179169,
28179311-28179664,28179807-28179941,28180097-28180225
Length = 540
Score = 34.7 bits (76), Expect = 0.070
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 421 IKNSGLFKPNPYLQVIIDDKIL--RKTEVIRNTLHPKWKEDLTILV-TPQSQLL-FRLAD 588
+K L K +PY+++ + + L +KT + + L+P+W E +V P++Q+L R+ D
Sbjct: 273 LKMDLLGKSDPYVKLRLSGEKLPSKKTSIKMSNLNPEWNEHFRFIVKDPETQILELRMFD 332
Query: 589 YHSFRKDNVIGEKKVNL 639
+ + + +G + V L
Sbjct: 333 WEKVKMHDKLGMQVVPL 349
>08_02_0098 -
12324664-12324822,12325430-12325543,12325649-12325921,
12326124-12326354,12326444-12326594,12326680-12326759,
12326839-12326913,12326992-12327093,12328000-12328121,
12329726-12329791,12330158-12330201,12330850-12330898,
12330967-12331087,12334631-12334735
Length = 563
Score = 32.7 bits (71), Expect = 0.28
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +1
Query: 406 VESANIKNSGLF-KPNPYLQVII---DDKILRKTEVIRNTLHPKWKEDLTILV--TPQSQ 567
VE+ ++ N L K +P+ + I DK ++K++ I N L+P W E +V T +
Sbjct: 270 VEARDLTNKDLVGKSDPFAVLYIRPLQDK-MKKSKTINNDLNPIWNEHYEFVVEDTSTQR 328
Query: 568 LLFRLADYHSFRKDNVIGEKKVNL 639
L ++ D + +IG +V+L
Sbjct: 329 LTVKIYDDEGLQASELIGCARVDL 352
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 442 KPNPYLQVIIDD-KILRKTEVIRNTLHPKWKEDLTILVTP--QSQLLFRLADYHSFRKDN 612
K +P++ + + + +KT V+ TL+P W + +V L+ + D+ +F KD
Sbjct: 454 KADPFVVLYLKKGETKKKTRVVTETLNPIWNQTFDFVVEDALHDLLMVEVWDHDTFGKD- 512
Query: 613 VIGEKKVNLLKVL 651
IG + L +V+
Sbjct: 513 YIGRCILTLTRVI 525
>07_01_1046 -
9138000-9138293,9139550-9139714,9139862-9140010,
9140363-9140510,9140659-9140727,9140827-9141087,
9141498-9141692,9142932-9143048,9143701-9144477
Length = 724
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 448 NPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILVTPQ-SQLLFRLADYHSF 600
+PY+ V + + +T VI N+ +PKW E + V S++ F + D F
Sbjct: 68 DPYVSVCLSGATVAQTRVIANSENPKWDEHFYVQVAHSVSRVEFHVKDNDVF 119
>05_04_0091 +
17839118-17839303,17840876-17840923,17841381-17841526,
17841616-17841664,17842260-17842316,17842460-17842627,
17842950-17843011,17843103-17843190,17843277-17843388,
17843472-17843548,17843622-17843759,17844424-17844588,
17844667-17844780,17845026-17845122,17845242-17845390
Length = 551
Score = 31.5 bits (68), Expect = 0.66
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +1
Query: 385 YHQLSLTVESANIKNSGLF-KPNPYLQVII--DDKI--LRKTEVIRNTLHPKWKEDLTI 546
Y L L+ ++ ++N F K +P L + I D ++ + +TEVI N+L P W TI
Sbjct: 58 YSPLELSFSASKLRNMDAFSKSDPMLVIYIRKDARLEEIGRTEVILNSLEPSWITKATI 116
>07_03_1784 -
29492511-29492804,29492913-29492999,29493076-29493222,
29493522-29493690,29493777-29494015,29494111-29494356,
29494419-29495084
Length = 615
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 475 DKILRKTEVIRNTLHPKWKEDLTI-LVTPQSQLL-FRLADYHSFRKDNVIGE 624
D ++++T I + P W+ED T L P+ LL + +Y KD+ G+
Sbjct: 527 DSVMKRTRAIEDNWVPVWEEDFTFKLTVPEIALLRVEVHEYDMSEKDDFGGQ 578
>04_04_1357 +
32860677-32860781,32861484-32861588,32861678-32861728,
32861829-32861949,32862495-32862616,32863032-32863133,
32863226-32863300,32863391-32863470,32863601-32863751,
32863850-32864080,32864221-32864517,32864638-32864751,
32864857-32865030
Length = 575
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +1
Query: 442 KPNPYLQVIID-DKILRKTEVIRNTLHPKWKEDLTILVTP--QSQLLFRLADYHSFRKDN 612
K +PY+ + + K KT V+ +L+P W + +V L+ + D+ +F +D
Sbjct: 461 KSDPYVVLSLKKSKTKYKTRVVSESLNPVWNQTFDFVVEDGLHDMLMLEVYDHDTFSRD- 519
Query: 613 VIGEKKVNLLKVL 651
+G + L KVL
Sbjct: 520 YMGRCILTLTKVL 532
>03_06_0619 -
35136435-35136728,35137155-35137358,35137476-35137646,
35137902-35138050,35138380-35138527,35138614-35138682,
35138767-35139027,35139223-35139417,35139772-35139888,
35140026-35140961
Length = 847
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 421 IKNSGLFKPNPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILVT-PQSQLLFRLADYHS 597
++ + +PY+ V + + +T VI N+ +P+W+E + V S+L F + D
Sbjct: 70 VRPKKIITSDPYVSVCLAGATVAQTRVIPNSENPRWEERFRVEVAHAVSRLEFHVKDNDV 129
Query: 598 F 600
F
Sbjct: 130 F 130
>09_06_0358 - 22504716-22505588
Length = 290
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 388 HQLSLTVESA-NIKNSGLFKPN--PYLQVIIDDKILRKTEV-IRNTLHPKWKEDLTILVT 555
+++ +TV SA ++KN + PY V IDD T V + N +P W + LT+ +
Sbjct: 6 YEVEVTVASARDLKNVNWRNGDLKPYAVVWIDDGAKCSTRVDLDNADNPTWDDKLTVPLP 65
Query: 556 PQSQL 570
P ++L
Sbjct: 66 PSTRL 70
>05_04_0314 - 20133281-20133824,20133911-20134991,20135116-20135488
Length = 665
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 496 EVIRNTLHPKWKEDLTILVTPQSQLLFRLADYHSFRK 606
+++R+ L PKW +DL + L R +YH+ R+
Sbjct: 599 DIVRDKLRPKWADDLVFVHNNLRLLSRRSEEYHTDRE 635
>03_05_1122 + 30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -2
Query: 463 LAGMDLV*TSLNFLYLLIPLLSSVDDMWTQK 371
L G++++ +SLN L+IP ++ + D WT K
Sbjct: 1220 LDGIEMILSSLNVEKLIIPAIAELVDTWTSK 1250
>02_04_0027 -
19014033-19014127,19014219-19014315,19014560-19014673,
19014759-19014923,19015169-19015306,19015402-19015478,
19015572-19015686,19015756-19015861,19016182-19016243,
19016407-19016472,19016628-19016810,19017359-19017415,
19017848-19017896,19017983-19018131,19019203-19019250,
19020061-19020201
Length = 553
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 391 QLSLTVESANIKNSGLF-KPNPYLQVIIDDKI-----LRKTEVIRNTLHPKWKEDLTI 546
Q+ L++ ++N+ + F K NP + V K L +TEVI N+L+P W + +
Sbjct: 45 QVELSLSASNLGDQEFFTKSNPMVIVYSKSKEGALEELGRTEVILNSLNPSWNARINV 102
>02_01_0149 + 1062044-1062997
Length = 317
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 448 NPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTI-LVTPQSQLLFRLADYHSFRKD 609
+PY V++ L +T V+R++ P+W + + L + + F + D F D
Sbjct: 51 DPYAAVVVAGNTLARTHVVRDSEDPEWSTHVLLHLAHHATGVAFHVKDADPFGSD 105
>01_06_1148 -
34895562-34895690,34896339-34896464,34896579-34896906,
34897127-34897216,34897284-34897360,34897519-34897593,
34897862-34897980,34899240-34899363,34899427-34899477,
34899590-34899688,34900104-34900214
Length = 442
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 433 GLFKPNPYLQVIIDDKILRKTEVIRNTLHPKWKED 537
G NPY+++ + +KT+V++ +P+WKE+
Sbjct: 338 GKCNTNPYVKLTFKG-VEKKTKVVKENRNPRWKEE 371
>08_02_1102 +
24319569-24319917,24320120-24321496,24321819-24322001,
24322147-24322460,24322515-24322631,24323057-24323313,
24323504-24323684,24323802-24324074,24324535-24324729
Length = 1081
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 406 VESANIK--NSGLFKPNPYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILVTPQSQLL-F 576
+E+ N++ +S F +PY+++ + + KT+V++ L+P W ++ + V +L
Sbjct: 8 IEARNLRAMDSNGFS-DPYVKLQLGKQRF-KTKVVKKNLNPAWDQEFSFSVGDVRDVLKL 65
Query: 577 RLADYHSFRKDNVIGEKKVNLLKVL 651
+ D D+ +G+ KV L VL
Sbjct: 66 YVYDEDMIGIDDFLGQVKVPLEDVL 90
>05_04_0334 -
20341186-20341422,20341509-20341569,20341652-20341719,
20341800-20342009,20342714-20342754,20342909-20342958,
20343069-20343157,20343233-20343307,20343498-20343598,
20343758-20343812,20343909-20344025,20344672-20344892,
20345525-20345582,20345706-20345822
Length = 499
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 30 YLLRISFNKFKKILKFSVYIQIFVYVYL 113
Y++R+ + FKK++ S Y+ +FV ++L
Sbjct: 262 YMMRVLESDFKKVVGISWYLWVFVVIFL 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,686,297
Number of Sequences: 37544
Number of extensions: 288760
Number of successful extensions: 555
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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