Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28j21
         (676 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC080593-1|AAH80593.1|  449|Homo sapiens SAMD8 protein protein.        49   2e-05
AL392111-3|CAI40906.1|  478|Homo sapiens sterile alpha motif dom...    49   2e-05
AL392111-6|CAI40909.1|  326|Homo sapiens sterile alpha motif dom...    48   3e-05
AL392111-5|CAI40908.1|  254|Homo sapiens sterile alpha motif dom...    48   3e-05
AK057811-1|BAB71586.1|  326|Homo sapiens protein ( Homo sapiens ...    48   3e-05
AK001985-1|BAA92020.1|  531|Homo sapiens protein ( Homo sapiens ...    33   0.93 
BC013402-1|AAH13402.1|  531|Homo sapiens Paf1, RNA polymerase II...    32   1.6  
BC000017-1|AAH00017.1|  531|Homo sapiens Paf1, RNA polymerase II...    32   1.6  
AJ401156-1|CAC20564.1|  531|Homo sapiens PD2 protein protein.          32   1.6  
AC005239-1|AAC25503.1|  510|Homo sapiens F23149_1 protein.             32   1.6  
AK098423-1|BAC05305.1|  485|Homo sapiens protein ( Homo sapiens ...    31   3.7  

>BC080593-1|AAH80593.1|  449|Homo sapiens SAMD8 protein protein.
          Length = 449

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 28/93 (30%), Positives = 44/93 (47%)
 Frame = +2

Query: 149 EEYSETMESDILNWGNKEVEELLHKENISSCLIEICKTHDIDGPCLLSFVDRDFHTHPFD 328
           EE +   +  I  W  K V   L  E     +  +C  H +DG  LL+  + D  + P +
Sbjct: 33  EEMAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLE 92

Query: 329 QLKLGERKRFILLVKKLQRHNRSAMMELGLCDD 427
              LG+ KR +L V+KLQ+ +   + E+G   D
Sbjct: 93  IKVLGDIKRLMLSVRKLQKIHIDVLEEMGYNSD 125


>AL392111-3|CAI40906.1|  478|Homo sapiens sterile alpha motif domain
           containing 8 protein.
          Length = 478

 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 28/93 (30%), Positives = 44/93 (47%)
 Frame = +2

Query: 149 EEYSETMESDILNWGNKEVEELLHKENISSCLIEICKTHDIDGPCLLSFVDRDFHTHPFD 328
           EE +   +  I  W  K V   L  E     +  +C  H +DG  LL+  + D  + P +
Sbjct: 62  EEMAGPNQLCIRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLE 121

Query: 329 QLKLGERKRFILLVKKLQRHNRSAMMELGLCDD 427
              LG+ KR +L V+KLQ+ +   + E+G   D
Sbjct: 122 IKVLGDIKRLMLSVRKLQKIHIDVLEEMGYNSD 154


>AL392111-6|CAI40909.1|  326|Homo sapiens sterile alpha motif domain
           containing 8 protein.
          Length = 326

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 26/83 (31%), Positives = 40/83 (48%)
 Frame = +2

Query: 179 ILNWGNKEVEELLHKENISSCLIEICKTHDIDGPCLLSFVDRDFHTHPFDQLKLGERKRF 358
           I  W  K V   L  E     +  +C  H +DG  LL+  + D  + P +   LG+ KR 
Sbjct: 9   IRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRL 68

Query: 359 ILLVKKLQRHNRSAMMELGLCDD 427
           +L V+KLQ+ +   + E+G   D
Sbjct: 69  MLSVRKLQKIHIDVLEEMGYNSD 91


>AL392111-5|CAI40908.1|  254|Homo sapiens sterile alpha motif domain
           containing 8 protein.
          Length = 254

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 26/83 (31%), Positives = 40/83 (48%)
 Frame = +2

Query: 179 ILNWGNKEVEELLHKENISSCLIEICKTHDIDGPCLLSFVDRDFHTHPFDQLKLGERKRF 358
           I  W  K V   L  E     +  +C  H +DG  LL+  + D  + P +   LG+ KR 
Sbjct: 9   IRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRL 68

Query: 359 ILLVKKLQRHNRSAMMELGLCDD 427
           +L V+KLQ+ +   + E+G   D
Sbjct: 69  MLSVRKLQKIHIDVLEEMGYNSD 91


>AK057811-1|BAB71586.1|  326|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25082 fis, clone CBL07772. ).
          Length = 326

 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 26/83 (31%), Positives = 40/83 (48%)
 Frame = +2

Query: 179 ILNWGNKEVEELLHKENISSCLIEICKTHDIDGPCLLSFVDRDFHTHPFDQLKLGERKRF 358
           I  W  K V   L  E     +  +C  H +DG  LL+  + D  + P +   LG+ KR 
Sbjct: 9   IRRWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRL 68

Query: 359 ILLVKKLQRHNRSAMMELGLCDD 427
           +L V+KLQ+ +   + E+G   D
Sbjct: 69  MLSVRKLQKIHIDVLEEMGYNSD 91


>AK001985-1|BAA92020.1|  531|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11123 fis, clone PLACE1006167. ).
          Length = 531

 Score = 33.1 bits (72), Expect = 0.93
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = +2

Query: 299 DRDFHTHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGLCDDLINPAT 445
           D  F T+PFDQ ++ + K   L  +K  +H+     +LG+  DLINP T
Sbjct: 45  DPKFITYPFDQNRIVQYKATSL--EKQHKHDLLTEPDLGVTIDLINPDT 91


>BC013402-1|AAH13402.1|  531|Homo sapiens Paf1, RNA polymerase II
           associated factor, homolog (S. cerevisiae) protein.
          Length = 531

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +2

Query: 299 DRDFHTHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGLCDDLINPAT 445
           D  F T+PFDQ +  + K   L  +K  +H+     +LG+  DLINP T
Sbjct: 45  DPKFITYPFDQNRFVQYKATSL--EKQHKHDLLTEPDLGVTIDLINPDT 91


>BC000017-1|AAH00017.1|  531|Homo sapiens Paf1, RNA polymerase II
           associated factor, homolog (S. cerevisiae) protein.
          Length = 531

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +2

Query: 299 DRDFHTHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGLCDDLINPAT 445
           D  F T+PFDQ +  + K   L  +K  +H+     +LG+  DLINP T
Sbjct: 45  DPKFITYPFDQNRFVQYKATSL--EKQHKHDLLTEPDLGVTIDLINPDT 91


>AJ401156-1|CAC20564.1|  531|Homo sapiens PD2 protein protein.
          Length = 531

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +2

Query: 299 DRDFHTHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGLCDDLINPAT 445
           D  F T+PFDQ +  + K   L  +K  +H+     +LG+  DLINP T
Sbjct: 45  DPKFITYPFDQNRFVQYKATSL--EKQHKHDLLTEPDLGVTIDLINPDT 91


>AC005239-1|AAC25503.1|  510|Homo sapiens F23149_1 protein.
          Length = 510

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +2

Query: 299 DRDFHTHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGLCDDLINPAT 445
           D  F T+PFDQ +  + K   L  +K  +H+     +LG+  DLINP T
Sbjct: 35  DPKFITYPFDQNRFVQYKATSL--EKQHKHDLLTEPDLGVTIDLINPDT 81


>AK098423-1|BAC05305.1|  485|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25557 fis, clone JTH02756. ).
          Length = 485

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 299 DRDFHTHPFDQLKLGERKRFILLVKKLQRHNRSAMMELGLCDDLINPAT 445
           D  F T+PFDQ +  + K   L  ++  +H+     +LG+  DLINP T
Sbjct: 35  DPKFITYPFDQNRFVQYKATSL--ERQHKHDLLTEPDLGVTIDLINPDT 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,987,570
Number of Sequences: 237096
Number of extensions: 1807017
Number of successful extensions: 2935
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2935
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)