Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28j02
         (593 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p pro...    64   1e-10
AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar pro...    64   1e-10
AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA...    64   1e-10
AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3....    61   1e-09
AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA ...    61   1e-09

>AY069116-1|AAL39261.1|  246|Drosophila melanogaster GH12958p
           protein.
          Length = 246

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 41/127 (32%), Positives = 62/127 (48%)
 Frame = +1

Query: 208 RYPCMPSLVALQQMRNRLQMAHLGKKLMKWTALATGRELRRLAIEINETHRRFNEDMRTA 387
           R P  PS  A   M+ RL  A  G  L+K  A A     R +  +I ET     + M+ A
Sbjct: 6   RLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKEA 65

Query: 388 FMLLARGRYFCSNLNQYVLENVEAKACVRVETTNKSISGVKVPHMEVVELGGPPYNHLGL 567
              LA  ++   ++NQ VL+NV  KA +++ T   +++GV +P  E  + G   Y   GL
Sbjct: 66  AFSLAEAKFTSGDINQVVLQNV-TKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYELAGL 124

Query: 568 EKGGHTI 588
            +GG  +
Sbjct: 125 ARGGQQL 131


>AF218238-1|AAG13186.1|  246|Drosophila melanogaster vacuolar
           proton-translocatingATPase subunit D protein.
          Length = 246

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 41/127 (32%), Positives = 62/127 (48%)
 Frame = +1

Query: 208 RYPCMPSLVALQQMRNRLQMAHLGKKLMKWTALATGRELRRLAIEINETHRRFNEDMRTA 387
           R P  PS  A   M+ RL  A  G  L+K  A A     R +  +I ET     + M+ A
Sbjct: 6   RLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKEA 65

Query: 388 FMLLARGRYFCSNLNQYVLENVEAKACVRVETTNKSISGVKVPHMEVVELGGPPYNHLGL 567
              LA  ++   ++NQ VL+NV  KA +++ T   +++GV +P  E  + G   Y   GL
Sbjct: 66  AFSLAEAKFTSGDINQVVLQNV-TKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYELAGL 124

Query: 568 EKGGHTI 588
            +GG  +
Sbjct: 125 ARGGQQL 131


>AE013599-2075|AAF58126.1|  246|Drosophila melanogaster CG8186-PA
           protein.
          Length = 246

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 41/127 (32%), Positives = 62/127 (48%)
 Frame = +1

Query: 208 RYPCMPSLVALQQMRNRLQMAHLGKKLMKWTALATGRELRRLAIEINETHRRFNEDMRTA 387
           R P  PS  A   M+ RL  A  G  L+K  A A     R +  +I ET     + M+ A
Sbjct: 6   RLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKEA 65

Query: 388 FMLLARGRYFCSNLNQYVLENVEAKACVRVETTNKSISGVKVPHMEVVELGGPPYNHLGL 567
              LA  ++   ++NQ VL+NV  KA +++ T   +++GV +P  E  + G   Y   GL
Sbjct: 66  AFSLAEAKFTSGDINQVVLQNV-TKAQIKIRTKKDNVAGVTLPVFESYQDGSDTYELAGL 124

Query: 568 EKGGHTI 588
            +GG  +
Sbjct: 125 ARGGQQL 131


>AL138972-6|CAB72289.1|  249|Drosophila melanogaster EG:BACR25B3.4
           protein.
          Length = 249

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 41/127 (32%), Positives = 62/127 (48%)
 Frame = +1

Query: 208 RYPCMPSLVALQQMRNRLQMAHLGKKLMKWTALATGRELRRLAIEINETHRRFNEDMRTA 387
           R P  PS  A   M++RL  A  G  L+K  A A     R +  +I ET     + M+ A
Sbjct: 6   RLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEA 65

Query: 388 FMLLARGRYFCSNLNQYVLENVEAKACVRVETTNKSISGVKVPHMEVVELGGPPYNHLGL 567
              LA  ++   ++NQ VL+NV  KA +++ T   +++GV +P  E    G   Y   GL
Sbjct: 66  AFSLAEVKFTTGDINQIVLQNV-TKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELAGL 124

Query: 568 EKGGHTI 588
            +GG  +
Sbjct: 125 ARGGQQL 131


>AE014298-411|AAG22401.2|  249|Drosophila melanogaster CG8310-PA
           protein.
          Length = 249

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 41/127 (32%), Positives = 62/127 (48%)
 Frame = +1

Query: 208 RYPCMPSLVALQQMRNRLQMAHLGKKLMKWTALATGRELRRLAIEINETHRRFNEDMRTA 387
           R P  PS  A   M++RL  A  G  L+K  A A     R +  +I ET     + M+ A
Sbjct: 6   RLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEA 65

Query: 388 FMLLARGRYFCSNLNQYVLENVEAKACVRVETTNKSISGVKVPHMEVVELGGPPYNHLGL 567
              LA  ++   ++NQ VL+NV  KA +++ T   +++GV +P  E    G   Y   GL
Sbjct: 66  AFSLAEVKFTTGDINQIVLQNV-TKAQIKIRTKKDNVAGVTLPIFEPYTDGVDTYELAGL 124

Query: 568 EKGGHTI 588
            +GG  +
Sbjct: 125 ARGGQQL 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,080,520
Number of Sequences: 53049
Number of extensions: 496832
Number of successful extensions: 1524
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)