Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28i23
(659 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 29 0.039
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 28 0.069
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 2.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 2.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 2.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 2.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 3.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 3.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 6.0
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 7.9
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 29.1 bits (62), Expect = 0.039
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 236 PMSVVLHEDKRYYPQAVEVYGPDVETVVQEEDTQALDK--PLVEPVKHKKFQVQEQQL-P 406
P ++ + ++P E GP VET++Q A ++ +++ +K Q++ ++L
Sbjct: 454 PAAIQIGHTPHHHPHPPETPGPQVETILQNACFCARNELMMILKEIKIITDQLKSEELNA 513
Query: 407 ETTYDMEYMADMLDNTNLI 463
+ T D ++ A ++D LI
Sbjct: 514 KVTNDWKFAAMVIDRMCLI 532
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 28.3 bits (60), Expect = 0.069
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Frame = +2
Query: 323 EEDTQALDKPL-VEPVKHK--KFQVQEQQLPETTYDMEYMADMLDN-TNLIRN---ITLM 481
EE+T PL + VK+ K + +++ +T + + L N + LI+ +T+M
Sbjct: 92 EENTILTTMPLLINVVKYLGGKHKFISKKIKKTMENKDITKRPLPNESQLIKRHPIVTIM 151
Query: 482 GHLHNGKTSFVDCL 523
GH+ +GKT+ +D L
Sbjct: 152 GHVDHGKTTLLDAL 165
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 102 NSSYKSPSIFNIDNYILKIFPKNNYPKQLPM 10
N++YK +N +NY K++ NY +Q+P+
Sbjct: 92 NNNYKYN--YNNNNYNKKLYYNINYIEQIPI 120
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 102 NSSYKSPSIFNIDNYILKIFPKNNYPKQLPM 10
N++YK +N +NY K++ NY +Q+P+
Sbjct: 92 NNNYKYN--YNNNNYNKKLYYNINYIEQIPI 120
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 102 NSSYKSPSIFNIDNYILKIFPKNNYPKQLPM 10
N++YK +N +NY K++ NY +Q+P+
Sbjct: 92 NNNYKYN--YNNNNYNKKLYYNINYIEQIPI 120
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 102 NSSYKSPSIFNIDNYILKIFPKNNYPKQLPM 10
N++YK +N +NY K++ NY +Q+P+
Sbjct: 92 NNNYKYN--YNNNNYNKKLYYNINYIEQIPI 120
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/41 (19%), Positives = 21/41 (51%)
Frame = -1
Query: 134 QTPSLARCSFQIRHINLRPFLILITIF*KYFRKIIIQNNCR 12
QT + + +L+ ++++ YF+K+++ N C+
Sbjct: 31 QTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCK 71
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 287 EVYGPDVETVVQEEDTQALDKPLVEPVK 370
+++GP V E+ + +KPLV ++
Sbjct: 486 DLFGPASPAYVHEDVSPTFEKPLVREIE 513
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 461 IRNITLMGHLHNGKTSFVDCLMRQTHP 541
+RN L+ +HN + + ++ Q HP
Sbjct: 353 LRNTELVERMHNKLRNALQTVLAQNHP 379
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 72 NIDNYILKIFPKNNYPKQLPM 10
N +NY K++ NY +Q+P+
Sbjct: 100 NYNNYNKKLYYNINYIEQIPV 120
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +3
Query: 30 NYFSEIFSKYSYQY 71
NY++ +++KY QY
Sbjct: 716 NYYANLYTKYHGQY 729
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,207
Number of Sequences: 438
Number of extensions: 3589
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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