Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28i22
         (577 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF273708-1|AAL35411.1|  118|Drosophila melanogaster PFTAIRE-inte...    32   0.48 
AE014297-475|AAF54113.3|  118|Drosophila melanogaster CG31483-PA...    32   0.48 
BT022171-1|AAY51565.1|  890|Drosophila melanogaster IP01285p pro...    31   0.85 
BT011386-1|AAR96178.1|  285|Drosophila melanogaster HL08122p pro...    31   0.85 
BT001752-1|AAN71507.1|  780|Drosophila melanogaster RH03424p pro...    31   0.85 
AE013599-2111|AAM70963.2| 1082|Drosophila melanogaster CG30084-P...    31   0.85 
AE013599-2108|ABI31098.1|  890|Drosophila melanogaster CG30084-P...    31   0.85 
AE013599-2107|AAZ52805.1|  780|Drosophila melanogaster CG30084-P...    31   0.85 
AY075178-1|AAL68048.1|  326|Drosophila melanogaster AT12771p pro...    31   1.1  
AE014134-2093|AAF53119.1|  326|Drosophila melanogaster CG14936-P...    31   1.1  

>AF273708-1|AAL35411.1|  118|Drosophila melanogaster
           PFTAIRE-interacting factor 2 protein.
          Length = 118

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPII-ACFPILCPCFIACCT 512
           C  PCC   C    +P    C P   PC   CCT
Sbjct: 53  CCSPCCTPCCTPCCTPCCKCCTPCCVPCCTPCCT 86



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPIIA-CFPILCPCFIACCT 512
           C  PCC   C    +P    C     PC + CCT
Sbjct: 49  CCSPCCSPCCTPCCTPCCTPCCKCCTPCCVPCCT 82



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
 Frame = +3

Query: 414 CIFPCCMVTC-PFLLSPIIACFPILCPCFIACCT 512
           C  PCC   C P        C P   PC   CCT
Sbjct: 57  CCTPCCTPCCTPCCKCCTPCCVPCCTPCCTPCCT 90



 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPII-ACFPILCPCFIACCT 512
           C  PCC   C       +  C P   PC   CCT
Sbjct: 61  CCTPCCTPCCKCCTPCCVPCCTPCCTPCCTPCCT 94



 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPIIACFPILCPCFIACCT 512
           C   CC   C    SP   C P   PC   CCT
Sbjct: 29  CCGSCCSPCCGPCCSP--CCGPCCSPCCSPCCT 59



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPII--ACFPILCPCFIACC 509
           C  PCC   CP   +      C P   PC   CC
Sbjct: 13  CCSPCCSPCCPPCCNDCCGSCCSPCCGPCCSPCC 46


>AE014297-475|AAF54113.3|  118|Drosophila melanogaster CG31483-PA
           protein.
          Length = 118

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPII-ACFPILCPCFIACCT 512
           C  PCC   C    +P    C P   PC   CCT
Sbjct: 53  CCSPCCTPCCTPCCTPCCKCCTPCCVPCCTPCCT 86



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPIIA-CFPILCPCFIACCT 512
           C  PCC   C    +P    C     PC + CCT
Sbjct: 49  CCSPCCSPCCTPCCTPCCTPCCKCCTPCCVPCCT 82



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
 Frame = +3

Query: 414 CIFPCCMVTC-PFLLSPIIACFPILCPCFIACCT 512
           C  PCC   C P        C P   PC   CCT
Sbjct: 57  CCTPCCTPCCTPCCKCCTPCCVPCCTPCCTPCCT 90



 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPII-ACFPILCPCFIACCT 512
           C  PCC   C       +  C P   PC   CCT
Sbjct: 61  CCTPCCTPCCKCCTPCCVPCCTPCCTPCCTPCCT 94



 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPIIACFPILCPCFIACCT 512
           C   CC   C    SP   C P   PC   CCT
Sbjct: 29  CCGSCCSPCCGPCCSP--CCGPCCSPCCSPCCT 59



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
 Frame = +3

Query: 414 CIFPCCMVTCPFLLSPII--ACFPILCPCFIACC 509
           C  PCC   CP   +      C P   PC   CC
Sbjct: 13  CCSPCCSPCCPPCCNDCCGSCCSPCCGPCCSPCC 46


>BT022171-1|AAY51565.1|  890|Drosophila melanogaster IP01285p
           protein.
          Length = 890

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = -3

Query: 515 GRAASYETRAQYREASYNGAKQKRAGNHAARENTTHSVQNPFALQNIRSEFSSNVFFKYF 336
           GR   Y+ + Q ++   N  KQ+   ++    N +   Q+P+   N  +  SSN    Y 
Sbjct: 610 GRNVRYQQQQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSSN---SYN 666

Query: 335 SNKFTSFN 312
           +N ++++N
Sbjct: 667 NNNYSNYN 674


>BT011386-1|AAR96178.1|  285|Drosophila melanogaster HL08122p
           protein.
          Length = 285

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = -3

Query: 515 GRAASYETRAQYREASYNGAKQKRAGNHAARENTTHSVQNPFALQNIRSEFSSNVFFKYF 336
           GR   Y+ + Q ++   N  KQ+   ++    N +   Q+P+   N  +  SSN    Y 
Sbjct: 5   GRNVRYQQQQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSSN---SYN 61

Query: 335 SNKFTSFN 312
           +N ++++N
Sbjct: 62  NNNYSNYN 69


>BT001752-1|AAN71507.1|  780|Drosophila melanogaster RH03424p
           protein.
          Length = 780

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = -3

Query: 515 GRAASYETRAQYREASYNGAKQKRAGNHAARENTTHSVQNPFALQNIRSEFSSNVFFKYF 336
           GR   Y+ + Q ++   N  KQ+   ++    N +   Q+P+   N  +  SSN    Y 
Sbjct: 500 GRNVRYQQQQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSSN---SYN 556

Query: 335 SNKFTSFN 312
           +N ++++N
Sbjct: 557 NNNYSNYN 564


>AE013599-2111|AAM70963.2| 1082|Drosophila melanogaster CG30084-PC,
           isoform C protein.
          Length = 1082

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = -3

Query: 515 GRAASYETRAQYREASYNGAKQKRAGNHAARENTTHSVQNPFALQNIRSEFSSNVFFKYF 336
           GR   Y+ + Q ++   N  KQ+   ++    N +   Q+P+   N  +  SSN    Y 
Sbjct: 802 GRNVRYQQQQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSSN---SYN 858

Query: 335 SNKFTSFN 312
           +N ++++N
Sbjct: 859 NNNYSNYN 866


>AE013599-2108|ABI31098.1|  890|Drosophila melanogaster CG30084-PG,
           isoform G protein.
          Length = 890

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = -3

Query: 515 GRAASYETRAQYREASYNGAKQKRAGNHAARENTTHSVQNPFALQNIRSEFSSNVFFKYF 336
           GR   Y+ + Q ++   N  KQ+   ++    N +   Q+P+   N  +  SSN    Y 
Sbjct: 610 GRNVRYQQQQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSSN---SYN 666

Query: 335 SNKFTSFN 312
           +N ++++N
Sbjct: 667 NNNYSNYN 674


>AE013599-2107|AAZ52805.1|  780|Drosophila melanogaster CG30084-PE,
           isoform E protein.
          Length = 780

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = -3

Query: 515 GRAASYETRAQYREASYNGAKQKRAGNHAARENTTHSVQNPFALQNIRSEFSSNVFFKYF 336
           GR   Y+ + Q ++   N  KQ+   ++    N +   Q+P+   N  +  SSN    Y 
Sbjct: 500 GRNVRYQQQQQQQQQYNNQQKQQYRNSYPMGSNYSTPSQSPYITSNTNNYSSSN---SYN 556

Query: 335 SNKFTSFN 312
           +N ++++N
Sbjct: 557 NNNYSNYN 564


>AY075178-1|AAL68048.1|  326|Drosophila melanogaster AT12771p
           protein.
          Length = 326

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 135 LIVSPFLSCVPCCDCCMNYIIPEESKEV 218
           ++++PF  C   CD C N  +P E + +
Sbjct: 177 MVLAPFACCKRSCDSCFNNFLPSEGQSI 204


>AE014134-2093|AAF53119.1|  326|Drosophila melanogaster CG14936-PA
           protein.
          Length = 326

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +3

Query: 135 LIVSPFLSCVPCCDCCMNYIIPEESKEV 218
           ++++PF  C   CD C N  +P E + +
Sbjct: 177 MVLAPFACCKRSCDSCFNNFLPSEGQSI 204


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,903,125
Number of Sequences: 53049
Number of extensions: 476217
Number of successful extensions: 1424
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)