Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28i22
(577 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83744-2|CAB06039.1| 430|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z78537-1|CAB01719.1| 182|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z79603-7|CAB01896.1| 259|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical pr... 28 4.1
L16685-8|AAO12393.1| 285|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical pr... 27 9.5
AY241928-1|AAO85277.1| 806|Caenorhabditis elegans xylosyltransf... 27 9.5
AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide O-xyl... 27 9.5
AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulv... 27 9.5
>Z83744-2|CAB06039.1| 430|Caenorhabditis elegans Hypothetical
protein C06A12.5 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.0
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 111 CLLVYILPLIVSPFLSC 161
CL ++++P +V PFLSC
Sbjct: 10 CLYLFVIPFVVQPFLSC 26
>Z78537-1|CAB01719.1| 182|Caenorhabditis elegans Hypothetical
protein C09F12.1 protein.
Length = 182
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 108 MCLLVYILPLIVSPFLSCVPCCDCCMNYIIPEESKEVRITYCILLIAI 251
+ L+V I ++ + FL+C+ CC C YII + I+ +LLIA+
Sbjct: 86 LSLIVQIFAVVYN-FLTCLACC--CKKYIIHPLTLFAVISTILLLIAV 130
>Z79603-7|CAB01896.1| 259|Caenorhabditis elegans Hypothetical
protein M163.7 protein.
Length = 259
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 434 HAARENTTHSVQNPFALQNIRSEFS 360
H + N S QNPF+ QN+ S FS
Sbjct: 225 HLFQSNGQTSAQNPFSFQNLESIFS 249
>Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical
protein ZK1058.3 protein.
Length = 352
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -3
Query: 467 YNGAKQKRAGNHAARENTTHSVQNPFALQNIRSEFSSN---VFFKYFSNKFTSF 315
+ GAK +++ + NT S+ NP A RS +N V F N F SF
Sbjct: 29 WQGAKTEKSTTISTSSNTEQSILNPLAPGGTRSSGIANENYVSTYVFDNDFPSF 82
>L16685-8|AAO12393.1| 285|Caenorhabditis elegans Hypothetical
protein ZC21.6a protein.
Length = 285
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 354 CFF*IFLEQIYVFQCSFYCSLDLMTEDFIE 265
CFF +F ++++ CS C+ LMT F E
Sbjct: 247 CFF-VFHTKVFIDMCSSVCNFSLMTTCFGE 275
>Z82070-7|CAB04909.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.8 protein.
Length = 321
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 414 CIFPCCMV-TCPFLLSPIIACFPILCPCFIACC 509
C+ P M TCP + +PI P PC + C
Sbjct: 146 CVTPVIMTATCPPITTPIPTTCPTPAPCPVKTC 178
>Z82070-6|CAB04910.1| 321|Caenorhabditis elegans Hypothetical
protein W04E12.6 protein.
Length = 321
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 414 CIFPCCMV-TCPFLLSPIIACFPILCPCFIACC 509
C+ P M TCP + +PI P PC I C
Sbjct: 146 CVTPVIMTATCPPITTPIPTTCPTPAPCPIKQC 178
>Z81470-1|CAB03881.1| 321|Caenorhabditis elegans Hypothetical
protein C14A6.1 protein.
Length = 321
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 414 CIFPCCMV-TCPFLLSPIIACFPILCPCFIACC 509
C+ P M TCP + +PI P PC I C
Sbjct: 146 CVTPVIMTATCPPITTPIPTTCPTPAPCPIKQC 178
>AY241928-1|AAO85277.1| 806|Caenorhabditis elegans
xylosyltransferase protein.
Length = 806
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 347 KKHCLRIRFLYFGVQMDFE 403
+KHC + FLYFG++ E
Sbjct: 142 RKHCYKAGFLYFGLEFGHE 160
>AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide
O-xylosyltransferase protein.
Length = 806
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 347 KKHCLRIRFLYFGVQMDFE 403
+KHC + FLYFG++ E
Sbjct: 142 RKHCYKAGFLYFGLEFGHE 160
>AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulva
protein 6 protein.
Length = 806
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 347 KKHCLRIRFLYFGVQMDFE 403
+KHC + FLYFG++ E
Sbjct: 142 RKHCYKAGFLYFGLEFGHE 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,336,686
Number of Sequences: 27780
Number of extensions: 266862
Number of successful extensions: 833
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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