Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28i18
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 125 3e-29
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 63 2e-10
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr... 32 0.40
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 30 1.2
U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81449-6|CAB03764.2| 489|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81449-5|CAB03762.2| 488|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical pr... 29 3.7
AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidas... 29 3.7
AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 29 3.7
Z69793-7|CAA93676.3| 527|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z69791-7|CAA93663.3| 527|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81071-8|CAB03016.1| 317|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 27 8.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 8.6
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 8.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 8.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 8.6
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 8.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 8.6
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 27 8.6
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 125 bits (301), Expect = 3e-29
Identities = 60/132 (45%), Positives = 86/132 (65%), Gaps = 2/132 (1%)
Frame = +2
Query: 242 LGKTFPDFSANTT-EGEINFHEWLGDKWGILFSHPSDFTPVCTTELARVLVLLPEFVKRN 418
LG T P+F+ T H ++G++W +LFSHP+DFTPVCTTELA ++ L PEF KR+
Sbjct: 3 LGDTVPNFTFETDLRKNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRH 62
Query: 419 TKVIGLSCDSVSSHLEWCKDIKSFAG-CNEDEPFPYPIIEDEKRELANKLGMIDNDELDH 595
+++ +S DS +H +W KDI S A N P+ II D R + +LGMID DE++
Sbjct: 63 VQILAISIDSSETHRDWAKDINSVAQLSNCGSHLPFEIIADTDRSICTELGMIDPDEMNS 122
Query: 596 KGMPLTARAVFI 631
+G+ L+ARAV +
Sbjct: 123 EGICLSARAVML 134
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 62.9 bits (146), Expect = 2e-10
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Frame = +2
Query: 242 LGKTFPDFSANTT-EGE---INFHEWLGDKWGILFSHPSDFTPVCTTELARVLVLLPEFV 409
+GK P F +GE ++ ++ G K+ +LF +P DFT VC TE+ EF
Sbjct: 6 IGKPAPQFKTQAVVDGEFVDVSLSDYKG-KYVVLFFYPLDFTFVCPTEIIAFSDRAEEFK 64
Query: 410 KRNTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPIIEDEKRELANKLGMIDNDEL 589
NT V+ S DSV SHL W + G E P++ D +++ G++ DE
Sbjct: 65 AINTVVLAASTDSVFSHLAWINQPRKHGGLGE---MNIPVLADTNHQISRDYGVLKEDE- 120
Query: 590 DHKGMPLTARAVFIVD 637
+ R +FI+D
Sbjct: 121 -----GIAFRGLFIID 131
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +2
Query: 317 KWGILFSHPSDFTPVCTTELARVLVLLPEFVKRNTKVIGLSCDSVSSHLEWCKDIKSFAG 496
KW ++F +P DFT VC TE+ EF +V+ SCDS SHL W + G
Sbjct: 63 KWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLGAEVVACSCDSHFSHLAWVNTPRKDGG 122
Query: 497 CNEDEPFPYPIIEDEKRELANKLGMIDNDE-LDHKGM 604
+ P++ D +++A+ G++D + L ++G+
Sbjct: 123 LGD---MDIPLLADFNKKIADSFGVLDKESGLSYRGL 156
>Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical
protein F23H12.6 protein.
Length = 1025
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = -2
Query: 179 LRQITQYYKSNYTSVKRSIQIQYTKYTSMLVF*MEYKYSSFIFIAC 42
L QIT SNYTS+ R+IQI YT+++ + K S IF C
Sbjct: 148 LEQITS--DSNYTSLSRTIQIYDQSYTNLVRQLEKLKTVSRIFTVC 191
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 539 RLQLSDKEMVRLHCNQQKT*CPCTIPSERIHCHRTGQ*LLCCASQTLEEGRAPEP 375
+L + D + + C+Q CP E +HC G +CC + + AP P
Sbjct: 155 KLTVLDPHGLPMKCSQIARSCP----GENMHCADVGLGYICCEDPSFQRKHAPPP 205
>U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical
protein K02E10.4b protein.
Length = 487
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 539 RLQLSDKEMVRLHCNQQKT*CPCTIPSERIHCHRTGQ*LLCCASQTLEEGRAPEP 375
+L + D + + C+Q CP E +HC G +CC + + AP P
Sbjct: 156 KLTVLDPHGLPMKCSQIARSCP----GENMHCADVGLGYICCEDPSFQRKHAPPP 206
>Z81449-6|CAB03764.2| 489|Caenorhabditis elegans Hypothetical
protein C46F11.5b protein.
Length = 489
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 484 LNVLAPFQVRGYTVTGQANDFCVALHKLWKKDEHPSQFCCADRGEV*WVREQYTPLIS*P 305
+++L QVR A C+ ++ +W+ +E S+ A R V W LI P
Sbjct: 100 IHLLRAEQVRLACYAAYATLACLLVNPVWEHNEVNSKIASATRRTVSWFGSWIQYLIITP 159
Query: 304 LVKIY 290
+V +Y
Sbjct: 160 VVTVY 164
>Z81449-5|CAB03762.2| 488|Caenorhabditis elegans Hypothetical
protein C46F11.5a protein.
Length = 488
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 484 LNVLAPFQVRGYTVTGQANDFCVALHKLWKKDEHPSQFCCADRGEV*WVREQYTPLIS*P 305
+++L QVR A C+ ++ +W+ +E S+ A R V W LI P
Sbjct: 100 IHLLRAEQVRLACYAAYATLACLLVNPVWEHNEVNSKIASATRRTVSWFGSWIQYLIITP 159
Query: 304 LVKIY 290
+V +Y
Sbjct: 160 VVTVY 164
>Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 392 LLPEFVKRNTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPI 529
+L E K + ++I L HLEW ++ FA ED FP I
Sbjct: 174 ILQEAQKHHLQIIPLV--QTMGHLEWILKLEEFAHLREDTRFPQVI 217
>AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidase
protein.
Length = 591
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 392 LLPEFVKRNTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPI 529
+L E K + ++I L HLEW ++ FA ED FP I
Sbjct: 174 ILQEAQKHHLQIIPLV--QTMGHLEWILKLEEFAHLREDTRFPQVI 217
>AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 392 LLPEFVKRNTKVIGLSCDSVSSHLEWCKDIKSFAGCNEDEPFPYPI 529
+L E K + ++I L HLEW ++ FA ED FP I
Sbjct: 174 ILQEAQKHHLQIIPLV--QTMGHLEWILKLEEFAHLREDTRFPQVI 217
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 447 VYPLTWNGARTLSLLLVAMKTNHFLI 524
VYPLTWNG +T ++ K N + +
Sbjct: 447 VYPLTWNGEQTWTIDYAFTKANAWFV 472
>Z69793-7|CAA93676.3| 527|Caenorhabditis elegans Hypothetical
protein F39D8.4 protein.
Length = 527
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -2
Query: 164 QYYKSNYTSVKRSIQIQYTKYTSMLV--F*MEYKYSSFIFIACQIFKRGDK 18
+Y K N+++V+ +Q Q+ KY+ ++ +Y Y S + A F + K
Sbjct: 297 EYVKINWSNVEAGLQDQFDKYSLNMIDHLGTKYDYGSVMHYAPTAFSKNGK 347
>Z69791-7|CAA93663.3| 527|Caenorhabditis elegans Hypothetical
protein F39D8.4 protein.
Length = 527
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -2
Query: 164 QYYKSNYTSVKRSIQIQYTKYTSMLV--F*MEYKYSSFIFIACQIFKRGDK 18
+Y K N+++V+ +Q Q+ KY+ ++ +Y Y S + A F + K
Sbjct: 297 EYVKINWSNVEAGLQDQFDKYSLNMIDHLGTKYDYGSVMHYAPTAFSKNGK 347
>Z81071-8|CAB03016.1| 317|Caenorhabditis elegans Hypothetical
protein F28F8.6 protein.
Length = 317
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 500 NEDEPFPYPIIEDEKRELANKLGMIDNDEL-DHKGMPLTARA 622
NE F ++E + KL I+N + D+K PLTARA
Sbjct: 68 NESGYFSIQVLEKALETFSLKLTNIENPAMVDYKNNPLTARA 109
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 595 VIQFVIVNHAELVGQLSLLVFNYRIRKWFVFIATSKRLNVLAPFQVRGYTVTGQAN 428
+I VIV+ + S+L F YRI++ FV + ++ N +V T T N
Sbjct: 1156 IIFNVIVSQSRTSESFSVLRFIYRIKENFVVVPSANEKNKQMADEVNAETKTSGGN 1211
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 595 VIQFVIVNHAELVGQLSLLVFNYRIRKWFVFIATSKRLNVLAPFQVRGYTVTGQAN 428
+I VIV+ + S+L F YRI++ FV + ++ N +V T T N
Sbjct: 1150 IIFNVIVSQSRTSESFSVLRFIYRIKENFVVVPSANEKNKQMADEVNAETKTSGGN 1205
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 595 VIQFVIVNHAELVGQLSLLVFNYRIRKWFVFIATSKRLNVLAPFQVRGYTVTGQAN 428
+I VIV+ + S+L F YRI++ FV + ++ N +V T T N
Sbjct: 1156 IIFNVIVSQSRTSESFSVLRFIYRIKENFVVVPSANEKNKQMADEVNAETKTSGGN 1211
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 595 VIQFVIVNHAELVGQLSLLVFNYRIRKWFVFIATSKRLNVLAPFQVRGYTVTGQAN 428
+I VIV+ + S+L F YRI++ FV + ++ N +V T T N
Sbjct: 1150 IIFNVIVSQSRTSESFSVLRFIYRIKENFVVVPSANEKNKQMADEVNAETKTSGGN 1205
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 260 DFSANTTEGEINFHEWLGDKWGILFSHPSDFTP 358
DF N ++ + F EW G + LF P + P
Sbjct: 474 DFDMNASDQQSEFSEWSGSRKSSLFPGPEEGGP 506
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 260 DFSANTTEGEINFHEWLGDKWGILFSHPSDFTP 358
DF N ++ + F EW G + LF P + P
Sbjct: 474 DFDMNASDQQSEFSEWSGSRKSSLFPGPEEGGP 506
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 260 DFSANTTEGEINFHEWLGDKWGILFSHPSDFTP 358
DF N ++ + F EW G + LF P + P
Sbjct: 474 DFDMNASDQQSEFSEWSGSRKSSLFPGPEEGGP 506
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 260 DFSANTTEGEINFHEWLGDKWGILFSHPSDFTP 358
DF N ++ + F EW G + LF P + P
Sbjct: 474 DFDMNASDQQSEFSEWSGSRKSSLFPGPEEGGP 506
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 260 DFSANTTEGEINFHEWLGDKWGILFSHPSDFTP 358
DF N ++ + F EW G + LF P + P
Sbjct: 474 DFDMNASDQQSEFSEWSGSRKSSLFPGPEEGGP 506
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 260 DFSANTTEGEINFHEWLGDKWGILFSHPSDFTP 358
DF N ++ + F EW G + LF P + P
Sbjct: 474 DFDMNASDQQSEFSEWSGSRKSSLFPGPEEGGP 506
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 345 QTSPRSAQQNWLGCSSFFQSL*SATQKSLA-CPVTVYPLTWNGARTLSLLLVAMKTNH 515
Q +P SA W +S + + S + CP TV+ + +G + ++ V+++T H
Sbjct: 302 QVTPVSAYVRWYPSNSNAEHVVSLNAVKVGVCPPTVFQVQLHGLQPSTIYRVSVRTKH 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,929,202
Number of Sequences: 27780
Number of extensions: 323464
Number of successful extensions: 852
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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