Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28i13
(748 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 42 7e-05
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 38 0.002
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 35 0.011
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 35 0.011
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 35 0.014
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 33 0.033
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 31 0.23
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 30 0.40
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.8
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 27 3.8
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 26 5.0
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 5.0
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 26 5.0
SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces... 26 6.6
SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyce... 26 6.6
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 25 8.7
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 25 8.7
SPCC645.08c |snd1||RNA-binding protein Snd1|Schizosaccharomyces ... 25 8.7
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 8.7
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 8.7
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 42.3 bits (95), Expect = 7e-05
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 473 LDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLH-NAKKLVHLNLANNRIKELAM 649
LDLS N +T++ + L L ++ +L+L++N I F H + L L L+ N + L+
Sbjct: 361 LDLSGNELTEIPYALGELPQLCSLNLASNKITGCRTFYHISLSHLQILVLSRNHLTSLSG 420
Query: 650 SHLPASVSSLDLTNNLLRDV 709
S+ LD+ +N + DV
Sbjct: 421 LENVPSLEKLDIRDNSITDV 440
Score = 31.5 bits (68), Expect = 0.13
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Frame = +2
Query: 524 LTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIK------ELAMSHLPASVSSLDL 685
L +V+LDLS N + + L +L LNLA+N+I +++SHL V S +
Sbjct: 355 LQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRTFYHISLSHLQILVLSRNH 414
Query: 686 TNNL--LRDVPS 715
+L L +VPS
Sbjct: 415 LTSLSGLENVPS 426
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 461 NINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKE 640
N+ LDLS+NN + L+++ TL+ S N + ++ + + KL HL L N +
Sbjct: 526 NLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQISSKIGSLVKLKHLYLQFNDLSN 585
Query: 641 LAMSH--LPASVSSLDLTNNLLRDVPS 715
L ++ ++DL+ N + ++ S
Sbjct: 586 RLPQEIGLLKNLETIDLSYNAITNIAS 612
Score = 29.5 bits (63), Expect = 0.53
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +2
Query: 458 HNINILDLSHNNITKLNHE-LDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRI 634
H + L++SHN L + ++R ++ LD+S N K + ++L LN++ N I
Sbjct: 429 HELISLNVSHNLSLDLPLDFMERCVKLKRLDISNNLRSPRGKPITALRQLEVLNMSRNDI 488
Query: 635 KE---LAMSHLPA-SVSSLDLTNNLLRDVP 712
E L S L S+ L++ NN L +P
Sbjct: 489 YELDPLIFSGLSRNSLKELNIANNKLFFLP 518
Score = 27.1 bits (57), Expect = 2.8
Identities = 21/90 (23%), Positives = 44/90 (48%)
Frame = +2
Query: 407 TCSNLAELYKFTLRQKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFL 586
+C+N Y K ++ LDL NNI E+ +++ + ++LS+N ++ + +
Sbjct: 712 SCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNLSSNILEKIKLPV 771
Query: 587 HNAKKLVHLNLANNRIKELAMSHLPASVSS 676
+KKL ++ +I + +S+SS
Sbjct: 772 ATSKKLTR-TISQLKIMRTLSGNPVSSLSS 800
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 35.1 bits (77), Expect = 0.011
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 473 LDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKEL-AM 649
L ++HNN+T+L E+ +L +V LD S N I+ + L +L + L +N I + A
Sbjct: 186 LYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPELGLLTELREVLLFDNMISVIPAE 245
Query: 650 SHLPASVSSLDLTNNLLRDV 709
+ L + N L+DV
Sbjct: 246 LGTLFQLKILGIEGNPLQDV 265
Score = 27.1 bits (57), Expect = 2.8
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 452 KHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNR 631
K N+ ILD S N+I + EL LTE+ + L N I + L +L L + N
Sbjct: 202 KLKNLVILDASGNSIKTIPPELGLLTELREVLLFDNMISVIPAELGTLFQLKILGIEGNP 261
Query: 632 IKELAMSHLPAS 667
++++ + + S
Sbjct: 262 LQDVYKNQIMES 273
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 35.1 bits (77), Expect = 0.011
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 461 NINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKE 640
N+ LD+S+N + L L L + L + +N + +L+ H L+ L+ NNRIKE
Sbjct: 669 NLQYLDISYNQLEDLTG-LSSLIHLRELKVDSNHLWSLDGIQH-LDGLLKLSACNNRIKE 726
Query: 641 LAMSHLPA-SVSSLDLTNNLLRDV 709
L+ ++ + L L NN + ++
Sbjct: 727 LSFTNSNLHRLEELLLGNNEIEEI 750
Score = 30.3 bits (65), Expect = 0.30
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +2
Query: 512 ELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPASVSSLDLTN 691
++ RL +V T + N + + + +L L+NN L H+ V L+L N
Sbjct: 817 DIRRLKRLVNFSFRTQDPEASNFVIQPSLDIRNLYLSNNTFVTLDCKHMFLGVRYLELAN 876
Query: 692 NLLRDVP 712
L++VP
Sbjct: 877 VQLKEVP 883
Score = 29.9 bits (64), Expect = 0.40
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 461 NINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKE 640
N+ +LDLSHN I+ + L L + L L N I+ + L LN+ + R+
Sbjct: 892 NLRVLDLSHNYISDI-ESLKPLQMIHRLYLVGNRIKKMRNLCDILANLKQLNVLDLRMNP 950
Query: 641 LAMSHLPASVSSL 679
L + P S+
Sbjct: 951 LNFNIYPVIDDSI 963
Score = 29.5 bits (63), Expect = 0.53
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = +2
Query: 473 LDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMS 652
L +N I +L+ L + L L N I+ + + + + + L+ L L NN++ L S
Sbjct: 717 LSACNNRIKELSFTNSNLHRLEELLLGNNEIEEIEE-ISSLQNLMVLQLDNNKLTNLKAS 775
Query: 653 HLPASVSSLDLTNNLLRDVPSD 718
+ L ++NN + + D
Sbjct: 776 QPMIHLRILRISNNAIHQLEVD 797
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 34.7 bits (76), Expect = 0.014
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +2
Query: 449 QKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANN 628
++ N+ L L N I K+ + LTE LDL N I + L N K L +L+L+ N
Sbjct: 59 ERFKNLQSLCLRQNQIKKIESVPETLTE---LDLYDNLIVRIEN-LDNVKNLTYLDLSFN 114
Query: 629 RIKELA-MSHLPASVSSLDLTNNLLRDV 709
IK + ++HL + +L N +R +
Sbjct: 115 NIKTIRNINHL-KGLENLFFVQNRIRRI 141
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 33.5 bits (73), Expect = 0.033
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 452 KHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNR 631
K + L++ N + + L RL + LD+S N I+ L + L L+++ NR
Sbjct: 73 KFTRLRYLNIRSNVLREFPESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNR 132
Query: 632 IKELA--MSHLPASVSSLDLTNN 694
+ EL ++H+P ++ L + NN
Sbjct: 133 LFELPTYIAHMP-NLEILKIENN 154
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 30.7 bits (66), Expect = 0.23
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +2
Query: 401 RATCSNLAELYKFTLRQKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNK 580
RA+ SN E K + + N +L ++ + + + LTE S NG+Q+L +
Sbjct: 302 RASFSNFMENEKKLYEKVNTNRTLLRNANLTLNEAQQSVKSLTERQGPRPSDNGVQDLQE 361
Query: 581 FLH--NAKKLVHLNLANNRIKELAMSHLPASVSSLDLTN 691
+ NA+KL H N EL + +DL N
Sbjct: 362 KMQEVNAEKLQHENEKLESSHELGSIRTLKAQKLIDLDN 400
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 29.9 bits (64), Expect = 0.40
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = +2
Query: 530 EVVTLDLSTNGIQNLNKFLHNAK---KLVHLNLANNRIKELA 646
+V+++ LS N +Q++ A+ KL++L+LANNRI L+
Sbjct: 215 DVISVSLSDNNLQSVTAVTTLAQTWPKLLNLSLANNRITSLS 256
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 154 NPIERSDKKERKKNDFAIILHYIIRCARGND 246
N + DK +++FA+ LH I R GN+
Sbjct: 864 NLCDHGDKGSLDRDEFAVALHLIYRKLNGNE 894
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 3.8
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Frame = +2
Query: 422 AELYKFTLRQKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLH---N 592
AE+ + +K + + L +T+ H + V T + +L++++H N
Sbjct: 180 AEVNFLCIHKKLRSKRLTPLLIKEVTRRCHLENVWQAVYTAGVLLPSPVSLSRYMHRSLN 239
Query: 593 AKKLVHLNLA-----NNRIKELAMSHLPASVSSLDLTNNLLRDVPS 715
KKL + A + KE A HLP + + L L+DVP+
Sbjct: 240 WKKLYDIGFAPFPLGSTEKKETAKYHLPPNTQTPGLRPMELKDVPA 285
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 419 LAELYKFTLRQKHHNINILDLSHNN-ITKLNHELDRLTEVV 538
L+ ++K HNI+I+DL+H N I L + VV
Sbjct: 170 LSTVFKNLALASSHNIHIVDLNHRNPIDSLTTHTSMINSVV 210
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 647 MSHLPASVSSLDLTNNLLRDVPSDLWAFD 733
+ L ASV DL N+ RD PS W F+
Sbjct: 33 VKRLKASVKLKDLKQNISRDAPS--WTFE 59
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 26.2 bits (55), Expect = 5.0
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +2
Query: 395 LHRATCSNLAELYKFTLRQKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNL 574
L + +++AEL TL H + LD+S NNI + LD L + L +
Sbjct: 273 LSSTSLADVAELPVHTL----HKLTFLDISENNIRDI-RSLDHLRTLENLKHLRITLSYF 327
Query: 575 NKFLHNAKKLV 607
NK AK LV
Sbjct: 328 NKPTDIAKLLV 338
>SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 356 CPESCVCSTTRDGLHRATCSNLAELYKFTLRQKHHNINILDLS 484
CP+ V TRD ++ A + + K Q N +ILD S
Sbjct: 466 CPKHMVWMDTRDEIYEAIMDSGYNMEKGFFAQSFENNDILDAS 508
>SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/82 (21%), Positives = 40/82 (48%)
Frame = +2
Query: 449 QKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANN 628
Q + N + DLS + L ++L R+ V +L N +NLN+++ + ++ +
Sbjct: 72 QSYLNDVLQDLSEDEFVSLYNKLLRIHMGVRKNLEKNFYKNLNEYVFISGEVESMTSDFK 131
Query: 629 RIKELAMSHLPASVSSLDLTNN 694
+ + L + L + L+L ++
Sbjct: 132 KFQSL-LKTLETDIEGLNLVDH 152
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 425 ELYKFTLRQKHHNINILDLSHNNITKLNHELDRLTEVVT 541
ELY F+++QK+ ++ ++ N+ +LN L ++ V T
Sbjct: 641 ELYSFSVKQKNQRTHVFSVT--NVDELNDWLVKINFVST 677
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 25.4 bits (53), Expect = 8.7
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 519 IGLPKLSRLICLPMVFRT*TNSYIMQKNWCT*T*QTTG*KNSPCRIYRLVLAHW 680
I L +S CLP+ T N ++ K+W T TT C + +HW
Sbjct: 1632 IQLILISDAHCLPVFDFTIENFNVLVKDWSTNLSATTS-LTLHCNAFNFAKSHW 1684
>SPCC645.08c |snd1||RNA-binding protein Snd1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 878
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 515 LDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKELAMSHLPA 664
L R + LDL+ NG+ L LH A + L ++ + +A +H+ A
Sbjct: 238 LQRNVVIELLDLAPNGVSFLGNVLHPAGNIATF-LLSSGLGRVADNHISA 286
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 8.7
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +2
Query: 422 AELYKFTLRQKHHNINILDLSHNNITKLN---HELDRLTEVVTLDLSTNGIQNLNKFLHN 592
++L+ +LRQ++ + N+L+L + T L+ + LD ++E+V +G++ +
Sbjct: 473 SDLWIKSLRQEYESKNLLELLDKHQTALSSVENRLDEISEIVDSYHKYSGVRTKLQVFEE 532
Query: 593 AKKLVHLNLAN 625
K LAN
Sbjct: 533 NKTNKSAILAN 543
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.4 bits (53), Expect = 8.7
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 440 TLRQKHHNINILDLSHNNITKLNHELDRLTEVVTLDLSTNGI 565
T+R ++H +N +L H + + RL + LD S+ G+
Sbjct: 911 TIRTRYHGMNCQNLIHYSFSYAIEFAQRLMRLSILDASSIGL 952
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,935,708
Number of Sequences: 5004
Number of extensions: 56241
Number of successful extensions: 208
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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