Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28i09
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80023-4|AAG24038.1|  318|Caenorhabditis elegans Serpentine rece...    29   4.7  
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical...    29   4.7  
U97402-2|AAB63409.2|  393|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U97402-1|ABB51193.1|  393|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z81102-1|CAB03202.1|  320|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U80023-4|AAG24038.1|  318|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 25 protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/54 (27%), Positives = 31/54 (57%)
 Frame = -2

Query: 757 IMCLVRKKNITVHGSYNSYILLKSGTSVMSTKYMTAKFFTFSAMLYNTSSIFIH 596
           +M L  KK+  +  SY+  I +K+GT ++++   +  FF    ++ + SSI ++
Sbjct: 21  MMYLALKKSPKIMRSYSVVITIKTGTDILAS---SMSFFVMQRIITDGSSIVVN 71


>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
            protein T05H4.3 protein.
          Length = 1152

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -2

Query: 583  SCPNLITTTRSSSDRMA*STCQPLCRCPSI 494
            SCPNL++   S++   + ++ +PLC C ++
Sbjct: 993  SCPNLVSLDISNNKLASCASLKPLCECKTL 1022


>U97402-2|AAB63409.2|  393|Caenorhabditis elegans Hypothetical
           protein C30H7.2a protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +2

Query: 380 PTTRLYFAHSNSNFQKKEYRNNRLFEIIRKVVYLQNELYARTSTQWLASRSGHSIRRRPC 559
           PT +L+    N    K+EYR++R  E + + +  Q E+  +   +  A ++ H+  +   
Sbjct: 94  PTLKLF---RNGEAAKREYRSSRSVEALSEFINKQMEVTVKKFIEKNALQAAHNPEKNTF 150

Query: 560 SGY 568
            GY
Sbjct: 151 IGY 153


>U97402-1|ABB51193.1|  393|Caenorhabditis elegans Hypothetical
           protein C30H7.2b protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +2

Query: 380 PTTRLYFAHSNSNFQKKEYRNNRLFEIIRKVVYLQNELYARTSTQWLASRSGHSIRRRPC 559
           PT +L+    N    K+EYR++R  E + + +  Q E+  +   +  A ++ H+  +   
Sbjct: 94  PTLKLF---RNGEAAKREYRSSRSVEALSEFINKQMEVTVKKFIEKNALQAAHNPEKNTF 150

Query: 560 SGY 568
            GY
Sbjct: 151 IGY 153


>Z81102-1|CAB03202.1|  320|Caenorhabditis elegans Hypothetical
           protein M02B1.3 protein.
          Length = 320

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -2

Query: 676 VMSTKYMTAKFFTFS--AMLYNTSSIFIHVGSQSCPNLITTT 557
           V+ST  ++ KF  ++  AML   SSIF+H  S    + ++TT
Sbjct: 170 VLSTAVLSKKFLLYAYWAMLMEVSSIFLHTRSILHISKLSTT 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,460,715
Number of Sequences: 27780
Number of extensions: 365818
Number of successful extensions: 981
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)