Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28h15
         (238 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U72508-1|AAC51638.1|  312|Homo sapiens B7 protein.                     28   6.1  
U47924-13|AAB51319.1|  312|Homo sapiens B7 protein.                    28   6.1  
AY834277-1|AAV97885.1|  202|Homo sapiens B7 isoform protein.           28   6.1  
AK223535-1|BAD97255.1|  343|Homo sapiens leucine-rich B7 protein...    28   6.1  
BC029858-1|AAH29858.1|  343|Homo sapiens leucine rich repeat con...    27   8.0  

>U72508-1|AAC51638.1|  312|Homo sapiens B7 protein.
          Length = 312

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 93  SILNYITHALDLGSNDNSLIRAEPERAASITI-NMLYQKLTSTE 221
           S LNY+TH L L ++ N L  A+      + I +  Y ++T TE
Sbjct: 107 SPLNYLTHLLWLKADGNRLRSAQMNELPYLQIASFAYNQITDTE 150


>U47924-13|AAB51319.1|  312|Homo sapiens B7 protein.
          Length = 312

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 93  SILNYITHALDLGSNDNSLIRAEPERAASITI-NMLYQKLTSTE 221
           S LNY+TH L L ++ N L  A+      + I +  Y ++T TE
Sbjct: 107 SPLNYLTHLLWLKADGNRLRSAQMNELPYLQIASFAYNQITDTE 150


>AY834277-1|AAV97885.1|  202|Homo sapiens B7 isoform protein.
          Length = 202

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 93  SILNYITHALDLGSNDNSLIRAEPERAASITI-NMLYQKLTSTE 221
           S LNY+TH L L ++ N L  A+      + I +  Y ++T TE
Sbjct: 107 SPLNYLTHLLWLKADGNRLRSAQMNELPYLQIASFAYNQITDTE 150


>AK223535-1|BAD97255.1|  343|Homo sapiens leucine-rich B7 protein
           isoform 1 variant protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 93  SILNYITHALDLGSNDNSLIRAEPERAASITI-NMLYQKLTSTE 221
           S LNY+TH L L ++ N L  A+      + I +  Y ++T TE
Sbjct: 107 SPLNYLTHLLWLKADGNRLRSAQMNELPYLQIASFAYNQITDTE 150


>BC029858-1|AAH29858.1|  343|Homo sapiens leucine rich repeat
           containing 23 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 93  SILNYITHALDLGSNDNSLIRAEPERAASITI-NMLYQKLTSTE 221
           S LNY+TH L L ++ N L  A+      + I +  Y ++T TE
Sbjct: 107 SPLNYLTHLLWLKADGNLLRSAQMNELPYLQIASFAYNQITDTE 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,495,054
Number of Sequences: 237096
Number of extensions: 481540
Number of successful extensions: 677
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 76,859,062
effective HSP length: 57
effective length of database: 63,344,590
effective search space used: 1330236390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)