Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28h15
         (238 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   0.22 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   0.22 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   6.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   6.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    19   8.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   8.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    19   8.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   8.3  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 0.22
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 147  LIRAEPERAASITINMLYQKLTSTE 221
            ++R EP+R A   IN+  + L+S+E
Sbjct: 998  IVRTEPQRPAGPPINLEARALSSSE 1022


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 0.22
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 147  LIRAEPERAASITINMLYQKLTSTE 221
            ++R EP+R A   IN+  + L+S+E
Sbjct: 994  IVRTEPQRPAGPPINLEARALSSSE 1018


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 81  NMPKSILNYITHALDLGSN 137
           N+P+  LNY T   D+G N
Sbjct: 213 NVPEQRLNYFTE--DVGLN 229



 Score = 19.0 bits (37), Expect = 8.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 116 MGYVIEN*FRHVGYGSLSGIN 54
           +GYV+++   HV   +  G+N
Sbjct: 339 LGYVVDSYGNHVKLYTKQGLN 359


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 81  NMPKSILNYITHALDLGSN 137
           N+P+  LNY T   D+G N
Sbjct: 213 NVPEQRLNYFTE--DVGLN 229



 Score = 19.0 bits (37), Expect = 8.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 116 MGYVIEN*FRHVGYGSLSGIN 54
           +GYV+++   HV   +  G+N
Sbjct: 339 LGYVVDSYGNHVKLYTKQGLN 359


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 149 DPSGAGAGR 175
           DP G GAG+
Sbjct: 397 DPQGCGAGK 405


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = +2

Query: 107 HNPCSRSWIK 136
           H  CSR W +
Sbjct: 18  HQRCSRDWFR 27


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 149 DPSGAGAGR 175
           DP G GAG+
Sbjct: 397 DPQGCGAGK 405


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = +2

Query: 80  QHAEINSQLHNPCSRSWI 133
           +H E   +L N C   W+
Sbjct: 371 KHYENEMRLRNGCPADWL 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,054
Number of Sequences: 438
Number of extensions: 1119
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)