Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28h12
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 33 0.27
U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical pr... 32 0.47
U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.63
AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical ... 29 4.4
AC006680-10|AAK72297.2| 335|Caenorhabditis elegans Seven tm rec... 29 4.4
Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical ... 28 5.8
AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical ... 28 7.7
AF016422-5|AAG24171.1| 291|Caenorhabditis elegans Serpentine re... 28 7.7
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical protein
T07F8.1 protein.
Length = 822
Score = 32.7 bits (71), Expect = 0.27
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 17/155 (10%)
Frame = +1
Query: 283 KIKEGVFDGPQIRSLMADEKFDVTMNNTESDAWL-----------AFKDAVNNFLGNNKH 429
KI G Q+R L+ E D + +W+ + A NN + +
Sbjct: 668 KINYQGLTGNQVRQLLRTENIDKVLKVFTDCSWIQNMRNFMNDLASLMSASNNAVFTDDD 727
Query: 430 -PDYKNKVANLLDKYQKLGCNMSI--KLHFLDSHVDFF---PDNLGDYSEEQGERFHQDI 591
D+ + NL + L +M + KLH L +H++ + G SE+ E FH
Sbjct: 728 LNDFAKTLKNLKRNIRILHPSMGVTPKLHILCTHLEPYIRAKRTWGRTSEQGMEAFHVLF 787
Query: 592 KTMETRYQGQWNVNMMADYCWSLTRDITEDTHKKN 696
+T ETR+ ++ + A+ +I + K+N
Sbjct: 788 RTTETRFSSVMSLKLRAELMIDYFANINYISDKRN 822
>U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical
protein T22F3.2b protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +1
Query: 199 MKEFVKALDKNNASFEYLCKKIPRLSDAKIKEGVFDGPQIRSLMADEKFDVTMNNTE 369
+KE ++AL + F Y C K + SDA +K + PQI LM +F ++ N+E
Sbjct: 224 IKELMQALFTESKIFGYNCSKCKKKSDAPVKPTLLRAPQI-LLMHISRF--SLKNSE 277
>U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical
protein T22F3.2a protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 199 MKEFVKALDKNNASFEYLCKKIPRLSDAKIKEGVFDGPQI 318
+KE ++AL + F Y C K + SDA +K + PQI
Sbjct: 224 IKELMQALFTESKIFGYNCSKCKKKSDAPVKPTLLRAPQI 263
>AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical
protein F25E5.7 protein.
Length = 379
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +1
Query: 337 EKFDVTMNNTESDAWLAFKDAVNNFLGNNKHPDYKNKVANLLDKYQKLGCNMSIKLHFLD 516
++FD+ M+ ++ D F+D V + N PD + +L+ + L N SI +
Sbjct: 128 DRFDIIMDRSKFDMTRKFQDLVRRVIVINGCPDVNSAKVLILELKKPLELNPSIWPVCIS 187
Query: 517 SHVDFFPDNLGDYS 558
+ F D D+S
Sbjct: 188 NDPQLF-DRSSDFS 200
>AC006680-10|AAK72297.2| 335|Caenorhabditis elegans Seven tm
receptor protein 41 protein.
Length = 335
Score = 28.7 bits (61), Expect = 4.4
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = -2
Query: 126 FCSYFEIFTRIPLFLNVV 73
F +FE+FT++P+F+ +V
Sbjct: 4 FYDFFEVFTKVPIFITIV 21
>Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 352 TMNNTESDAWLAFKDAVNNFLGNNKHPDYKNKVANLLDKYQKLGCNMSIKLHFLDSHVDF 531
+M N S + + FK + +NF G+ + +Y NK N D+ N SI FL+ +
Sbjct: 650 SMQNLPSTSEMQFKSSDDNFDGSFSNFEYDNK-ENEHDE-----ANESIDFGFLNEELKM 703
Query: 532 FPDN 543
PD+
Sbjct: 704 IPDD 707
>AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 352 TMNNTESDAWLAFKDAVNNFLGNNKHPDYKNKVANLLDKYQKLGCNMSIKLHFLDSHVDF 531
+M N S + + FK + +NF G+ + +Y NK N D+ N SI FL+ +
Sbjct: 650 SMQNLPSTSEMQFKSSDDNFDGSFSNFEYDNK-ENEHDE-----ANESIDFGFLNEELKM 703
Query: 532 FPDN 543
PD+
Sbjct: 704 IPDD 707
>AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical
protein Y26D4A.10 protein.
Length = 546
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 451 ANLLDKYQKLGCNMSIKLHFLDSHVDFFPDNLGDYSEEQGE 573
A++L+K + + K+H D H +F N DY E +
Sbjct: 491 ADILEKRARALEDQKCKIHPTDDHTNFSRSNFSDYPNEYAD 531
>AF016422-5|AAG24171.1| 291|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 58 protein.
Length = 291
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -2
Query: 708 RLGVVFFVS---IFSNITCQ*PAVISHHIHIPLTLVPCLHSFYVLMKPFSLF 562
R +VFF++ IF+ TC + +H IPL ++ L S Y +++ + LF
Sbjct: 95 RCWIVFFITSDRIFA--TCAPISYHNHRFKIPLAVIIILISAYTILEQYILF 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,378
Number of Sequences: 27780
Number of extensions: 371970
Number of successful extensions: 1047
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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