Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28h08
(729 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 116 3e-27
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 71 2e-13
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 66 6e-12
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 57 3e-09
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 57 3e-09
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 55 9e-09
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 51 2e-07
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 51 2e-07
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 50 3e-07
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 48 1e-06
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 46 6e-06
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 44 3e-05
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 42 7e-05
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 41 2e-04
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 40 5e-04
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 38 0.002
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 36 0.004
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 33 0.042
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 30 0.29
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 29 0.68
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 29 0.68
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 26 4.8
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 26 4.8
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 26 6.3
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 116 bits (280), Expect = 3e-27
Identities = 66/185 (35%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Frame = +2
Query: 173 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDK 352
MVKET Y++L V + E HPDKNPN G+KFK+IS+AYE+L++ +K
Sbjct: 1 MVKETKLYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEK 60
Query: 353 RRIYDQGGEQALKEXXXXXXXXXXPMDLF-DMXXXXXXXXXXXXXXXXXXDVIHQLSVTL 529
R YD+ GE+ L+ DLF D++H + VTL
Sbjct: 61 RATYDRFGEEGLQGGGADGGMSAD--DLFASFFGGGMFGGGMPRGPRKGKDLVHTIKVTL 118
Query: 530 EELYCGTVRKLTLQKNVIXXXXXXXXXXXXAVQTCPVCRGSGMQVQIQQLGPGMIQQIQT 709
E+LY G KL LQK VI +V++C C GSG++ + +GP MIQ++Q
Sbjct: 119 EDLYRGKTTKLALQKKVICPKCSGRGGKEGSVKSCASCNGSGVKFITRAMGP-MIQRMQM 177
Query: 710 VCCEC 724
C +C
Sbjct: 178 TCPDC 182
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 70.5 bits (165), Expect = 2e-13
Identities = 33/68 (48%), Positives = 42/68 (61%)
Frame = +2
Query: 173 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDK 352
MV +T YD L V+P + E HPDKNPN +KFK+IS AYEVLS+P +
Sbjct: 1 MVADTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQR 60
Query: 353 RRIYDQGG 376
R++YDQ G
Sbjct: 61 RKLYDQYG 68
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 65.7 bits (153), Expect = 6e-12
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 10/194 (5%)
Frame = +2
Query: 173 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNP-----NEGEKFKQISQAYEVL 337
MV +T YDIL V + +E HPDK P E+F+ + +AY++L
Sbjct: 1 MVVDTKLYDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDIL 60
Query: 338 SNPDKRRIYDQGG--EQALKEXXXXXXXXXXPMDLFDM--XXXXXXXXXXXXXXXXXXDV 505
+P+ R +YD G + + +F M DV
Sbjct: 61 KDPESREMYDMYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGPGKNVPRDRKRRGSDV 120
Query: 506 IHQLSVTLEELYCGTVRKLTLQKNVIXXXXXXXXXXXXAVQ-TCPVCRGSGMQVQIQQLG 682
IH ++LE+++ G KL +N + A + C C G G++ ++ +G
Sbjct: 121 IHDYEISLEDMFKGKEVKLRATRNTLCPRCQGRGGKRFAKEKPCLSCDGKGVKQHLKHVG 180
Query: 683 PGMIQQIQTVCCEC 724
P + Q +C C
Sbjct: 181 PHHVTNSQVICDTC 194
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 56.8 bits (131), Expect = 3e-09
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Frame = +2
Query: 182 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNE----GEKFKQISQAYEVLSNPD 349
+T YYD+LG+ + T + HPDKNP++ EKF++IS+AY+VL +
Sbjct: 6 DTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEK 65
Query: 350 KRRIYDQ-GGEQALKE 394
R YDQ G E+A+ E
Sbjct: 66 LRSQYDQFGKEKAVPE 81
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 56.8 bits (131), Expect = 3e-09
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +2
Query: 164 IIKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN--PNEGEKFKQISQAYEVL 337
IIK K YY+IL +K CT E HPDKN P+ E FK +S+A++VL
Sbjct: 106 IIKY-KNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVL 164
Query: 338 SNPDKRRIYDQGG 376
S+P+ R YD+ G
Sbjct: 165 SDPNLRAHYDRTG 177
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 55.2 bits (127), Expect = 9e-09
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Frame = +2
Query: 200 ILGVKPNCTTDEXXXXXXXXXXXXHPDKNP-NEG--EKFKQISQAYEVLSNPDKRRIYDQ 370
ILGV + + E HPDKNP NE EKF +I++A+EVLS+P++R+IYD
Sbjct: 11 ILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDA 70
Query: 371 GGEQAL 388
GE+ L
Sbjct: 71 YGEEGL 76
Score = 39.1 bits (87), Expect = 6e-04
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 620 AVQTCPVCRGSGMQVQIQQLGPGMIQQIQTVCCEC 724
A+++CPVC GSG +V + PG QQ++ C C
Sbjct: 168 AIESCPVCGGSGFRVIEHMIAPGFRQQMRMPCNAC 202
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 50.8 bits (116), Expect = 2e-07
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 167 IKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE---KFKQISQAYEVL 337
+K K +Y ILGV T E HPDKN E +FK++ +AY +L
Sbjct: 342 LKKSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTIL 401
Query: 338 SNPDKRRIYDQG 373
S+P+ RR +D G
Sbjct: 402 SDPESRRRFDSG 413
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 50.8 bits (116), Expect = 2e-07
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG-----EKFKQISQAYEVLSNPDKRR 358
Y LG+ + T+D+ HPD++ + EKF+ I AYEVLS+P K+
Sbjct: 10 YLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKKE 69
Query: 359 IYDQGGEQALK 391
IYD GEQ LK
Sbjct: 70 IYDNFGEQGLK 80
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 50.0 bits (114), Expect = 3e-07
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 185 TTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRR 358
T Y LGV + + E HPD NP++ +KF +I QAYEVL +P K++
Sbjct: 85 TDPYKTLGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKK 144
Query: 359 IYDQGGEQALK 391
+D G A K
Sbjct: 145 AFDTYGAGAFK 155
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 48.4 bits (110), Expect = 1e-06
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2
Query: 164 IIKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN---PNEG-EKFKQISQAYE 331
+++ V + YYDIL + + D HPDKN P EKF+++++AY+
Sbjct: 1 MVQRVVDRDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQ 60
Query: 332 VLSNPDKRRIYDQGGE 379
VLS+P R YD+ G+
Sbjct: 61 VLSDPKLREKYDKLGK 76
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 46.0 bits (104), Expect = 6e-06
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK----FKQISQAYEVLSNPDKRR 358
YY IL ++ N T + HPD+NP + E+ F+++ A+EVLS+ KR
Sbjct: 13 YYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRL 72
Query: 359 IYDQ 370
IYDQ
Sbjct: 73 IYDQ 76
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 43.6 bits (98), Expect = 3e-05
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNE---GEKFKQISQAYEVLSNPDKRRI 361
YY++LG+ + E HPDKNPN+ EKF + AY L + R+
Sbjct: 10 YYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKA 69
Query: 362 YD 367
YD
Sbjct: 70 YD 71
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 42.3 bits (95), Expect = 7e-05
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 179 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNP---NEGEKFKQISQAYEVLSNPD 349
K+ Y+IL V + E HPD+NP + E F QI+ AY +LSN D
Sbjct: 6 KDMDCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDD 65
Query: 350 KRRIYDQ 370
KR+ +++
Sbjct: 66 KRKWHEK 72
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 40.7 bits (91), Expect = 2e-04
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPN-EGE---KFKQISQAYEVLSNPDKRR 358
YY ILG + + E HPD+NP E E +F+ I +A+EVL +P R
Sbjct: 13 YYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRE 72
Query: 359 IYDQ 370
++DQ
Sbjct: 73 LFDQ 76
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 39.5 bits (88), Expect = 5e-04
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +2
Query: 179 KETTYYDILGVKP---NCTTDEXXXXXXXXXXXXHPDK-----NPNEGEKFKQISQAYEV 334
K+ +Y +LG+ T++ HPDK N N+ FK I +AYE+
Sbjct: 94 KQQDHYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEI 153
Query: 335 LSNPDKRRIYDQGGEQA 385
LS+P +RR +D E A
Sbjct: 154 LSDPVRRRQFDSVDENA 170
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 182 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDKRRI 361
+ T+Y++L V + E HPDKNP E + + +L N + R+
Sbjct: 38 KATFYELLEVPTKASIKEINRAYRKKSILYHPDKNPKSKELYTLLGLIVNILRNTETRKR 97
Query: 362 YD 367
YD
Sbjct: 98 YD 99
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDK-NPNEG----EKFKQISQAYEVLSNPDKR 355
YY IL + P + +E HPD+ +P+ E+F+ +++AY VLS+ +R
Sbjct: 5 YYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRR 64
Query: 356 RIYDQ 370
YD+
Sbjct: 65 AQYDR 69
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 33.1 bits (72), Expect = 0.042
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK------FKQISQAYEVLSNPDKR 355
Y +LGV+ + + + HPD+ +E +K F +++ AY VLS+ +R
Sbjct: 33 YSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRR 92
Query: 356 RIYDQGGE 379
+ YD+ G+
Sbjct: 93 KHYDKTGQ 100
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 30.3 bits (65), Expect = 0.29
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 622 SSNLS-SVPWLWYASTNSTARPGYDTADSNSMLRMPW 729
+SN+S S W+ YA+ N T YD D +S + PW
Sbjct: 633 ASNVSKSEVWVLYANRNDTHLWSYDCTDEDSAIIGPW 669
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 29.1 bits (62), Expect = 0.68
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 191 YYDILGVKPN--CTTDEXXXXXXXXXXXXHPDK---NPNEGEKFKQISQAYEVLSNPDKR 355
+Y +L +K T DE HPDK P+ Q+ +AY+VLS+ R
Sbjct: 3 HYSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDR 62
Query: 356 RIY 364
+ Y
Sbjct: 63 QQY 65
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 29.1 bits (62), Expect = 0.68
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDK---NPNEGEKFKQISQAYEVLSNPDKRRIY 364
YD+L + P + D+ HPDK NP + F + +A L N R
Sbjct: 33 YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92
Query: 365 D 367
D
Sbjct: 93 D 93
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 26.2 bits (55), Expect = 4.8
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPN-------EGEK-FKQISQAYEVLSNPD 349
Y+ILG+ + D+ HPDK N E EK + +I+ AY L++
Sbjct: 100 YEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDK 159
Query: 350 KRRIY 364
R Y
Sbjct: 160 TRENY 164
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +2
Query: 176 VKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE 301
+K T Y+IL + CT ++ HPDK N +
Sbjct: 28 LKSLTPYEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQ 69
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 419 KIHHHYHPLPLMLVHHLDHKFAFCQDSRAP 330
++ H YH +PL L HL H + SRAP
Sbjct: 494 RLIHEYH-IPLRLAKHLSHNYG----SRAP 518
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,654,495
Number of Sequences: 5004
Number of extensions: 49546
Number of successful extensions: 153
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -