Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28h08
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 140 9e-34
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 71 9e-13
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 65 6e-11
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 51 7e-07
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 50 2e-06
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 48 7e-06
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 46 4e-05
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 43 2e-04
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 43 3e-04
Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical p... 42 5e-04
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 42 5e-04
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 41 0.001
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 41 0.001
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 35 0.052
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 35 0.052
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 35 0.052
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 35 0.068
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 35 0.068
U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical pr... 28 5.9
U23183-2|AAA64339.2| 89|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 140 bits (339), Expect = 9e-34
Identities = 73/184 (39%), Positives = 100/184 (54%)
Frame = +2
Query: 173 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDK 352
MVKET YYD+LGVKP+ + +E HPDKNP+ E+FKQISQAYEVLS+ K
Sbjct: 1 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKK 60
Query: 353 RRIYDQGGEQALKEXXXXXXXXXXPMDLFDMXXXXXXXXXXXXXXXXXXDVIHQLSVTLE 532
R+IYDQGGE+AL+ P D+FDM +H L VTL+
Sbjct: 61 RQIYDQGGEEALQGGGGGGEGFHNPFDVFDM--FFGGGGRGGRGERRVKPTVHNLRVTLD 118
Query: 533 ELYCGTVRKLTLQKNVIXXXXXXXXXXXXAVQTCPVCRGSGMQVQIQQLGPGMIQQIQTV 712
LY G +KL + + + + C CRG G++V++ ++GP M+QQ+Q+
Sbjct: 119 TLYKGVTKKLKISRTATCKGCKGLGGNEGSAKECSDCRGRGIKVRVIRMGP-MVQQMQSH 177
Query: 713 CCEC 724
C C
Sbjct: 178 CDSC 181
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/86 (39%), Positives = 48/86 (55%)
Frame = +2
Query: 182 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDKRRI 361
+TT Y L V+P+ + + HPDKNP+ G+KFK+IS AYEVLS+P+KRR+
Sbjct: 11 DTTLYTTLNVRPDASQADIKKSYFKLAKEYHPDKNPDHGDKFKEISFAYEVLSSPEKRRL 70
Query: 362 YDQGGEQALKEXXXXXXXXXXPMDLF 439
YD G + ++ P LF
Sbjct: 71 YDARGLEGVQGGGAGGGGGGFPGGLF 96
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/76 (40%), Positives = 41/76 (53%)
Frame = +2
Query: 500 DVIHQLSVTLEELYCGTVRKLTLQKNVIXXXXXXXXXXXXAVQTCPVCRGSGMQVQIQQL 679
D +H L+VTLEELY G KL L K + C CRG G++ +QQ+
Sbjct: 141 DTVHPLNVTLEELYVGKTSKLKLSKKALCKTCEGSGGKKGEKYKCDACRGRGVKTIVQQI 200
Query: 680 GPGMIQQIQTVCCECR 727
GPGM+QQ+Q C C+
Sbjct: 201 GPGMLQQMQVHCDACK 216
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 67.7 bits (158), Expect = 8e-12
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRRIY 364
YY +LG+ T DE HPDKN G KFK+I++AY+VLS+ K++IY
Sbjct: 5 YYKVLGISKGATDDEIKKAYRKMALKYHPDKNKEAGAENKFKEIAEAYDVLSDDKKKKIY 64
Query: 365 DQGGEQALKE 394
DQ GE+ LKE
Sbjct: 65 DQFGEEGLKE 74
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +2
Query: 503 VIHQLSVTLEELYCGTVRKLTLQKNVI 583
V+H LSV+LE++ GT +K+ + + V+
Sbjct: 159 VLHDLSVSLEDVLKGTTKKMKITRKVM 185
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKN----PNEGEKFKQISQAYEVLSNPDKRRI 361
Y++LG++ N T DE HPDKN P + E FK+I+ A VLSNP+KRR+
Sbjct: 40 YNVLGIQKNATDDEIKKAYRKLALRYHPDKNLDGDPEKTEMFKEINYANAVLSNPNKRRV 99
Query: 362 YDQGGEQALK 391
YD+ GE LK
Sbjct: 100 YDEMGETGLK 109
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 64.1 bits (149), Expect = 1e-10
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 5/183 (2%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNE---GEKFKQISQAYEVLSNPDKRRI 361
+Y ILGV N ++ HPD+N ++ EKF+ +S AYEVLS+ +KR +
Sbjct: 25 FYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQDLSSAYEVLSDKEKRAM 84
Query: 362 YDQGGEQALKEXXXXXXXXXXPM-DLFDMXXXXXXXXXXXXXXXXXXDVIHQLSVTLEEL 538
YD+ GE+ + + P F DV L VTLEE+
Sbjct: 85 YDRHGEEGVAKMGGGGGGGHDPFSSFFGDFFGGGGGHGGEEGTPKGADVTIDLFVTLEEV 144
Query: 539 YCGTVRKLTLQKNVIXXXXXXXXXXXXAVQTCPVCRGSGMQVQIQQLGPGMIQQIQT-VC 715
Y G ++ +K V + C CR +++ +Q+G G Q Q VC
Sbjct: 145 YNGHFVEIKRKKAV--------YKQTSGTRQCN-CR---HEMRTEQMGQGRFQMFQVKVC 192
Query: 716 CEC 724
EC
Sbjct: 193 DEC 195
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +2
Query: 176 VKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG---EKFKQISQAYEVLSNP 346
V E +Y +LGV+ + E HPD+NPN+ E+FK++S AY VLS+P
Sbjct: 13 VSEMDFYQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHAQEEFKKVSIAYSVLSDP 72
Query: 347 DKRRIYDQGG 376
+KRR YD G
Sbjct: 73 NKRRQYDVSG 82
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDK--NPNEGEKFKQISQAYEVLSNPDKRRIY 364
YY+IL + + D+ HPDK P+ E FK + AY VLS+ DKRR Y
Sbjct: 138 YYEILKIDKKASDDDIRKEYRKLALKLHPDKCRAPHATEAFKALGNAYAVLSDTDKRRQY 197
Query: 365 DQGGEQA 385
DQ G +A
Sbjct: 198 DQYGAEA 204
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN---PNEGEKFKQISQAYEVLSNPDKRRI 361
YY++LGV+ + HPD+N PN ++F +I++AYEVL + + R+
Sbjct: 21 YYELLGVERDADDRTIRKAFKKLAIKKHPDRNTDDPNAHDEFVKINKAYEVLKDENLRKK 80
Query: 362 YDQGGEQALKE 394
YDQ GE+ L++
Sbjct: 81 YDQFGEKGLED 91
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 170 KMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSN 343
K +++ T+Y++LGV+ T E HPD + E F ++ AY+VL
Sbjct: 22 KKIRQRTHYEVLGVESTATLSEIKSAFYAQSKKVHPDNSSEESATASFLELKNAYDVLRR 81
Query: 344 PDKRRIYD 367
P RR+YD
Sbjct: 82 PADRRLYD 89
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK----FKQISQAYEVLSNPDKRR 358
+Y++L V+ + D+ HPDKNP+ E+ F+ + AY+VLS+P +R
Sbjct: 29 HYEVLEVERDADDDKIKKNYRKLALKWHPDKNPDRIEECTQQFRLLQAAYDVLSDPRERE 88
Query: 359 IYDQGGEQALK 391
YD+ E LK
Sbjct: 89 FYDRHRESILK 99
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE----KFKQISQAYEVLSNPDKRR 358
+Y +LG+ + + + HPD NP E KF Q++ AYE+LS+ DKR+
Sbjct: 25 HYKVLGLAQSASQKDIKSAYYKLSKQHHPDTNPTNKEEAAKKFHQVAMAYEILSSEDKRK 84
Query: 359 IYD 367
YD
Sbjct: 85 AYD 87
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +2
Query: 170 KMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK------FKQISQAYE 331
++V + YY ILGV+ N E HPD +E EK F I+ A E
Sbjct: 374 ELVGKRDYYKILGVRRNANKREITKAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIAAAKE 433
Query: 332 VLSNPDKRRIYDQG 373
VLSN +KRR +D G
Sbjct: 434 VLSNEEKRRAFDNG 447
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE-------KFKQISQAYEVLSNPDK 352
Y++LGVK +C HPDK+ E KF+ +++AY++LS+ +K
Sbjct: 16 YELLGVKKDCDEKALKKGYYRQSMRWHPDKSNLVEEDMQTYTTKFQLLNKAYQILSDEEK 75
Query: 353 RRIYDQGG 376
R+IYD+ G
Sbjct: 76 RKIYDETG 83
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE------KFKQISQAYEVLSNPDK 352
YY ILGVK N + E HPD +E E KF I+ A EVL + +K
Sbjct: 380 YYKILGVKRNASKREITKAYRKLAQKWHPDNFSDEEEKKKAEKKFIDIAAAKEVLQDEEK 439
Query: 353 RRIYDQG 373
RR +DQG
Sbjct: 440 RRQFDQG 446
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE--KFKQISQAYEVLSNPDKRRIYD 367
Y +LG+ + E HPDK +E +F +I++AYEVLS+P ++ YD
Sbjct: 24 YKVLGISRRASAKEIKSAYKSLAREWHPDKRKDEAASGRFMEIAEAYEVLSDPLRKERYD 83
Query: 368 QGG 376
+ G
Sbjct: 84 RFG 86
>Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical
protein K07F5.16 protein.
Length = 155
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 179 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDK----NPNEGEKFKQISQAYEVLSNP 346
KE Y +LG + + D+ HPDK N N EKF ++ AY +L++
Sbjct: 12 KEPKLYRLLGCDESSSIDQITAEYRARVRDCHPDKVKEHNTNSTEKFMELQNAYSILTSD 71
Query: 347 DKRRIYD 367
+R+ YD
Sbjct: 72 SRRKTYD 78
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +2
Query: 179 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK------FKQISQAYEVLS 340
+E +Y IL V + T DE HPD+ + EK F ++ +A+EVL
Sbjct: 23 EEIDFYAILNVPKDATDDEIIKAYRKRCLMFHPDRFVDNDEKKDAERVFVKLRRAHEVLL 82
Query: 341 NPDKRRIYDQGGEQAL 388
+P +R IYD G Q L
Sbjct: 83 DPKQRAIYDALGVQGL 98
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE--KFKQISQAYEVLSNPDKRRIY 364
YY LGV HPD N + KF++IS+AYEVLS+ KR+ Y
Sbjct: 45 YYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSDDTKRQEY 104
Query: 365 DQGG 376
D G
Sbjct: 105 DAYG 108
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE--KFKQISQAYEVLSNPDKRRIY 364
YY LGV HPD N + KF++IS+AYEVLS+ KR+ Y
Sbjct: 45 YYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSDDTKRQEY 104
Query: 365 DQGG 376
D G
Sbjct: 105 DAYG 108
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDK--NPNEGEKFKQISQAYEVLSNPDKRRIY 364
+Y IL V + DE HPDK +P+ E K ++ A+ +L +P KRR Y
Sbjct: 28 FYKILNVDKKASPDEIRIAFRKRIREVHPDKCKHPSATEASKVVNNAFSLLMDPAKRRQY 87
Query: 365 D 367
D
Sbjct: 88 D 88
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Frame = +2
Query: 191 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN---------------PNEGEKFKQISQA 325
YY+I+GV + T E HPD++ +E E+F + +A
Sbjct: 19 YYEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLVKEA 78
Query: 326 YEVLSNPDKRRIYD 367
Y+VL N +KR+ YD
Sbjct: 79 YDVLRNEEKRKEYD 92
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 272 HPDKNPNEGEKFKQISQAYEVLSN 343
HPDKNP E F++I+ AYE+LS+
Sbjct: 1353 HPDKNPEGREMFERINAAYELLSS 1376
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 272 HPDKNPNEGEKFKQISQAYEVLSN 343
HPDKNP E F++I+ AYE+LS+
Sbjct: 1353 HPDKNPEGREMFERINAAYELLSS 1376
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 272 HPDKNPNEGEKFKQISQAYEVLSN 343
HPDKNP E F++I+ AYE+LS+
Sbjct: 1353 HPDKNPEGREMFERINAAYELLSS 1376
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 34.7 bits (76), Expect = 0.068
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +2
Query: 179 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG------EKFKQISQAYEVLS 340
+E + Y LG+ E HPDK+ ++ +KFK+I+QAYE+L+
Sbjct: 4 REDSPYITLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEILT 63
Query: 341 NPDKRRIYDQ 370
+ KR D+
Sbjct: 64 DKKKRADLDR 73
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 194 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE----KFKQISQAYEVLSNPDKRRI 361
Y IL ++ CT E HPDKN + E +F + +A++ L + +KR
Sbjct: 10 YKILHLEKGCTDKEIQKAYRAQCLKWHPDKNLDNKEEAERRFIEAKEAFDFLYDKEKREE 69
Query: 362 YDQGGEQ 382
YD E+
Sbjct: 70 YDNREER 76
>U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical
protein T20F7.6 protein.
Length = 423
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 281 KNPNEGEKFKQ---ISQAYEVLSNPDKRRIYDQG 373
K PN+ E F + I+Q YE + + K ++DQG
Sbjct: 32 KTPNDKEAFARLLWINQCYEAMPSSSKMVVFDQG 65
>U23183-2|AAA64339.2| 89|Caenorhabditis elegans Hypothetical
protein K01A12.2 protein.
Length = 89
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 692 SYPGLAVEFVLAYQSHGTLDKFELHPFYHHVPHISHRSRSFEASVF*LCHSTTP 531
S+P + F++ +QS L F L P HH R+ A VF C + P
Sbjct: 19 SHPDFRLLFLIFFQSAYFLQNFFLDPPLHHSTTTREWERAHRACVF--CSTPNP 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,795,403
Number of Sequences: 27780
Number of extensions: 280626
Number of successful extensions: 680
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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