Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28h05
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62907-1|AAB27278.1| 451|Homo sapiens gamma-aminobutyric acidA ... 42 0.002
AB209295-1|BAD92532.1| 461|Homo sapiens gamma-aminobutyric acid... 42 0.002
S62908-1|AAB27279.1| 492|Homo sapiens gamma-aminobutyric acidA ... 42 0.003
BC028629-1|AAH28629.1| 492|Homo sapiens gamma-aminobutyric acid... 42 0.003
AF166361-1|AAG12455.1| 492|Homo sapiens GABA receptor subunit a... 42 0.003
Y18994-1|CAB60835.1| 99|Homo sapiens GABA-C receptor rho3 subu... 41 0.003
X14766-1|CAA32874.1| 456|Homo sapiens GABA-A receptor alpha 1 s... 40 0.008
M62400-1|AAA52509.1| 473|Homo sapiens gamma-aminobutyric acid r... 40 0.008
BC130344-1|AAI30345.1| 474|Homo sapiens gamma-aminobutyric acid... 40 0.008
BC030696-1|AAH30696.1| 456|Homo sapiens GABRA1 protein protein. 40 0.008
AL353659-1|CAC36328.2| 473|Homo sapiens gamma-aminobutyric acid... 40 0.008
AL353135-3|CAI16246.1| 473|Homo sapiens gamma-aminobutyric acid... 40 0.008
AK223447-1|BAD97167.1| 456|Homo sapiens gamma-aminobutyric acid... 40 0.008
L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine recep... 40 0.011
BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid... 40 0.011
BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid... 40 0.011
BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid... 40 0.011
U30461-1|AAB52519.1| 554|Homo sapiens GABAA receptor subunit al... 39 0.019
BC035055-1|AAH35055.1| 554|Homo sapiens gamma-aminobutyric acid... 39 0.019
M82919-1|AAA52511.1| 473|Homo sapiens GABA-alpha receptor beta-... 38 0.025
BC010641-1|AAH10641.1| 473|Homo sapiens gamma-aminobutyric acid... 38 0.025
S81944-1|AAB36480.1| 453|Homo sapiens gamma-aminobutyric acid t... 38 0.043
BC099641-1|AAH99641.1| 453|Homo sapiens gamma-aminobutyric acid... 38 0.043
BC099640-1|AAH99640.1| 453|Homo sapiens gamma-aminobutyric acid... 38 0.043
BC096242-1|AAH96242.1| 453|Homo sapiens gamma-aminobutyric acid... 38 0.043
BC096241-1|AAH96241.1| 453|Homo sapiens gamma-aminobutyric acid... 38 0.043
X52009-1|CAA36258.1| 449|Homo sapiens inhibitory glycine recept... 37 0.057
BC114967-1|AAI14968.1| 366|Homo sapiens GLRA1 protein protein. 37 0.057
BC114947-1|AAI14948.1| 457|Homo sapiens GLRA1 protein protein. 37 0.057
BC074980-1|AAH74980.1| 449|Homo sapiens glycine receptor, alpha... 37 0.057
BC031087-1|AAH31087.1| 465|Homo sapiens gamma-aminobutyric acid... 37 0.057
X15376-1|CAA33437.1| 467|Homo sapiens GABA-A receptor gamma 2 s... 36 0.099
X14767-1|CAA32875.1| 474|Homo sapiens GABA-A receptor beta 1 su... 36 0.099
U93917-1|AAC39917.1| 449|Homo sapiens glycine receptor alpha 3 ... 36 0.099
M86868-1|AAA52510.1| 465|Homo sapiens gamma-amino butyric acid ... 36 0.099
M59216-1|AAA35862.1| 474|Homo sapiens gamma-aminobutyric acid r... 36 0.099
BC130354-1|AAI30355.1| 465|Homo sapiens gamma-aminobutyric acid... 36 0.099
BC130352-1|AAI30353.1| 465|Homo sapiens gamma-aminobutyric acid... 36 0.099
BC074795-1|AAH74795.1| 467|Homo sapiens gamma-aminobutyric acid... 36 0.099
BC069348-1|AAH69348.1| 467|Homo sapiens gamma-aminobutyric acid... 36 0.099
BC059389-1|AAH59389.1| 475|Homo sapiens gamma-aminobutyric acid... 36 0.099
BC036086-1|AAH36086.1| 464|Homo sapiens glycine receptor, alpha... 36 0.099
AL121833-2|CAC07339.1| 465|Homo sapiens gamma-aminobutyric acid... 36 0.099
AK127001-1|BAC86784.1| 133|Homo sapiens protein ( Homo sapiens ... 36 0.099
AF165124-1|AAD50273.1| 467|Homo sapiens gamma-aminobutyric acid... 36 0.099
AF018157-1|AAC39918.1| 219|Homo sapiens glycine receptor alpha ... 36 0.099
AF017724-1|AAC39919.1| 465|Homo sapiens glycine receptor alpha ... 36 0.099
U95367-1|AAC51357.1| 440|Homo sapiens GABA-A receptor pi subuni... 36 0.13
S77554-1|AAB33983.1| 474|Homo sapiens GABAA receptor beta 2 sub... 36 0.13
S77553-1|AAB33982.1| 512|Homo sapiens GABAA receptor beta 2 sub... 36 0.13
S67368-1|AAB29370.1| 474|Homo sapiens gamma-aminobutyric acid A... 36 0.13
BC109106-1|AAI09107.1| 440|Homo sapiens gamma-aminobutyric acid... 36 0.13
BC109105-1|AAI09106.1| 440|Homo sapiens gamma-aminobutyric acid... 36 0.13
BC105639-1|AAI05640.1| 474|Homo sapiens GABRB2 protein protein. 36 0.13
BC099719-1|AAH99719.1| 474|Homo sapiens GABRB2 protein protein. 36 0.13
BC099705-1|AAH99705.1| 474|Homo sapiens GABRB2 protein protein. 36 0.13
BC074865-1|AAH74865.1| 440|Homo sapiens gamma-aminobutyric acid... 36 0.13
BC074810-1|AAH74810.1| 440|Homo sapiens gamma-aminobutyric acid... 36 0.13
BC022449-1|AAH22449.1| 474|Homo sapiens gamma-aminobutyric acid... 36 0.13
AF009702-1|AAC24194.1| 440|Homo sapiens GABA-A receptor pi subu... 36 0.13
S82769-1|AAB39369.1| 467|Homo sapiens GABAA receptor gamma 3 su... 36 0.17
AF269144-1|AAF99698.1| 467|Homo sapiens GABAA receptor gamma 3 ... 36 0.17
AF228458-1|AAF63215.1| 449|Homo sapiens GABAA receptor gamma 3 ... 36 0.17
BC033801-1|AAH33801.1| 452|Homo sapiens gamma-aminobutyric acid... 35 0.23
AL391845-4|CAI15436.1| 452|Homo sapiens gamma-aminobutyric acid... 35 0.23
AF016917-1|AAB70007.1| 452|Homo sapiens GABA-A receptor delta s... 35 0.23
X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine recept... 35 0.30
CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein. 35 0.30
BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha... 35 0.30
AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2... 35 0.30
AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2... 35 0.30
AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha ... 35 0.30
BC109211-1|AAI09212.1| 632|Homo sapiens gamma-aminobutyric acid... 33 1.2
BC109210-1|AAI09211.1| 632|Homo sapiens gamma-aminobutyric acid... 33 1.2
AF189259-1|AAF70380.1| 632|Homo sapiens GABA-A receptor theta s... 33 1.2
AF144648-1|AAD51172.1| 627|Homo sapiens GABA-A receptor theta p... 33 1.2
U33267-1|AAB37750.1| 497|Homo sapiens glycine receptor beta sub... 32 1.6
BC032635-1|AAH32635.1| 497|Homo sapiens glycine receptor, beta ... 32 1.6
AF094755-1|AAC71034.1| 497|Homo sapiens glycine receptor beta s... 32 1.6
AF094754-1|AAC71033.1| 497|Homo sapiens glycine receptor beta s... 32 1.6
BC050330-1|AAH50330.1| 1459|Homo sapiens ALMS1 protein protein. 31 2.8
BC035025-1|AAH35025.1| 1459|Homo sapiens ALMS1 protein protein. 31 2.8
AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein. 31 2.8
AC096546-1|AAX82023.1| 1291|Homo sapiens unknown protein. 31 2.8
AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein. 31 2.8
Y09765-1|CAA70904.1| 506|Homo sapiens GABA receptor epsilon sub... 31 3.7
Y07637-1|CAA68914.1| 505|Homo sapiens putative GABA-gated chlor... 31 3.7
U92283-1|AAB94645.1| 506|Homo sapiens GABA-A receptor epsilon s... 31 3.7
U66661-1|AAB49284.1| 506|Homo sapiens GABA-A receptor epsilon s... 31 3.7
AL669831-3|CAM12826.1| 163|Homo sapiens novel protein protein. 30 6.5
Y09763-1|CAA70903.1| 506|Homo sapiens GABRE protein. 30 8.6
>S62907-1|AAB27278.1| 451|Homo sapiens gamma-aminobutyric acidA
receptor alpha 2 subunit protein.
Length = 451
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 402 RRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
++ + A ++ NSVS IDR +R++FP F NL YW Y
Sbjct: 398 KKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWATY 440
>AB209295-1|BAD92532.1| 461|Homo sapiens gamma-aminobutyric acid A
receptor, alpha 2 precursor variant protein.
Length = 461
Score = 41.9 bits (94), Expect = 0.002
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 402 RRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
++ + A ++ NSVS IDR +R++FP F NL YW Y
Sbjct: 408 KKPENKPAEAKKTFNSVSKIDRMSRIVFPVLFGTFNLVYWATY 450
>S62908-1|AAB27279.1| 492|Homo sapiens gamma-aminobutyric acidA
receptor alpha 3 subunit protein.
Length = 492
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIY 530
NSVS +D+ +R++FP FA+ NL YW Y
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATY 478
>BC028629-1|AAH28629.1| 492|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 3 protein.
Length = 492
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIY 530
NSVS +D+ +R++FP FA+ NL YW Y
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATY 478
>AF166361-1|AAG12455.1| 492|Homo sapiens GABA receptor subunit
alpha 3 protein.
Length = 492
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIY 530
NSVS +D+ +R++FP FA+ NL YW Y
Sbjct: 450 NSVSKVDKISRIIFPVLFAIFNLVYWATY 478
>Y18994-1|CAB60835.1| 99|Homo sapiens GABA-C receptor rho3 subunit
protein.
Length = 99
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = +3
Query: 315 LTMERTTQTETRVPRWRQLLYCLAGDDRYRRQRQREAGSRGHINSV----SH-IDRAARV 479
+ M++T+ + R+ C D R +R++ G GH+ + +H ID +R+
Sbjct: 24 IDMDQTSLSLNSEDFMRRKSICSPSTDSSRIKRRKSLG--GHVGRIILENNHVIDTYSRI 81
Query: 480 LFPASFALLNLFYWMIY 530
LFP + L NLFYW +Y
Sbjct: 82 LFPIVYILFNLFYWGVY 98
>X14766-1|CAA32874.1| 456|Homo sapiens GABA-A receptor alpha 1
subunit protein.
Length = 456
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIY 530
NSVS IDR +R+ FP F + NL YW Y
Sbjct: 414 NSVSKIDRLSRIAFPLLFGIFNLVYWATY 442
>M62400-1|AAA52509.1| 473|Homo sapiens gamma-aminobutyric acid
receptor type A rho-1 subunit protein.
Length = 473
Score = 39.9 bits (89), Expect = 0.008
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 363 RQLLYCLAGDDRYRRQRQREAGSRGHINSVSH-IDRAARVLFPASFALLNLFYWMIYA 533
R ++ +R QR+ + S + +H ID+ +R++FPA++ L NL YW I++
Sbjct: 416 RMMVQLTLASERSSPQRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 473
>BC130344-1|AAI30345.1| 474|Homo sapiens gamma-aminobutyric acid
(GABA) receptor, rho 1 protein.
Length = 474
Score = 39.9 bits (89), Expect = 0.008
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 363 RQLLYCLAGDDRYRRQRQREAGSRGHINSVSH-IDRAARVLFPASFALLNLFYWMIYA 533
R ++ +R QR+ + S + +H ID+ +R++FPA++ L NL YW I++
Sbjct: 417 RMMVQLTLASERSSPQRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 474
>BC030696-1|AAH30696.1| 456|Homo sapiens GABRA1 protein protein.
Length = 456
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIY 530
NSVS IDR +R+ FP F + NL YW Y
Sbjct: 414 NSVSKIDRLSRIAFPLLFGIFNLVYWATY 442
>AL353659-1|CAC36328.2| 473|Homo sapiens gamma-aminobutyric acid
(GABA) receptor, rho 1 protein.
Length = 473
Score = 39.9 bits (89), Expect = 0.008
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 363 RQLLYCLAGDDRYRRQRQREAGSRGHINSVSH-IDRAARVLFPASFALLNLFYWMIYA 533
R ++ +R QR+ + S + +H ID+ +R++FPA++ L NL YW I++
Sbjct: 416 RMMVQLTLASERSSPQRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 473
>AL353135-3|CAI16246.1| 473|Homo sapiens gamma-aminobutyric acid
(GABA) receptor, rho 1 protein.
Length = 473
Score = 39.9 bits (89), Expect = 0.008
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 363 RQLLYCLAGDDRYRRQRQREAGSRGHINSVSH-IDRAARVLFPASFALLNLFYWMIYA 533
R ++ +R QR+ + S + +H ID+ +R++FPA++ L NL YW I++
Sbjct: 416 RMMVQLTLASERSSPQRKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS 473
>AK223447-1|BAD97167.1| 456|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 1 precursor variant protein.
Length = 456
Score = 39.9 bits (89), Expect = 0.008
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIY 530
NSVS IDR +R+ FP F + NL YW Y
Sbjct: 414 NSVSKIDRLSRIAFPLLFGIFNLVYWATY 442
>L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine receptor
alpha-5-subunit protein.
Length = 462
Score = 39.5 bits (88), Expect = 0.011
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 414 QREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
++ + S+ NS+S ID+ +R++FP F NL YW Y
Sbjct: 410 EKTSESKKTYNSISKIDKMSRIVFPVLFGTFNLVYWATY 448
>BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 39.5 bits (88), Expect = 0.011
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 414 QREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
++ + S+ NS+S ID+ +R++FP F NL YW Y
Sbjct: 410 EKTSESKKTYNSISKIDKMSRIVFPVLFGTFNLVYWATY 448
>BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 39.5 bits (88), Expect = 0.011
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 414 QREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
++ + S+ NS+S ID+ +R++FP F NL YW Y
Sbjct: 410 EKTSESKKTYNSISKIDKMSRIVFPVLFGTFNLVYWATY 448
>BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5, precursor protein.
Length = 462
Score = 39.5 bits (88), Expect = 0.011
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 414 QREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
++ + S+ NS+S ID+ +R++FP F NL YW Y
Sbjct: 410 EKTSESKKTYNSISKIDKMSRIVFPVLFGTFNLVYWATY 448
>U30461-1|AAB52519.1| 554|Homo sapiens GABAA receptor subunit
alpha4 protein.
Length = 554
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDDFAWSDN 566
+ S ID+ AR+LFP +F N+ YW++Y S D S++
Sbjct: 513 SGTSKIDKYARILFPVTFGAFNMVYWVVY-LSKDTMEKSES 552
>BC035055-1|AAH35055.1| 554|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 4 protein.
Length = 554
Score = 38.7 bits (86), Expect = 0.019
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDDFAWSDN 566
+ S ID+ AR+LFP +F N+ YW++Y S D S++
Sbjct: 513 SGTSKIDKYARILFPVTFGAFNMVYWVVY-LSKDTMEKSES 552
>M82919-1|AAA52511.1| 473|Homo sapiens GABA-alpha receptor beta-3
subunit protein.
Length = 473
Score = 38.3 bits (85), Expect = 0.025
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
+ V+ IDR +R++FP +F+L NL YW+ Y
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYY 471
>BC010641-1|AAH10641.1| 473|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, beta 3 protein.
Length = 473
Score = 38.3 bits (85), Expect = 0.025
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
+ V+ IDR +R++FP +F+L NL YW+ Y
Sbjct: 442 LTDVNAIDRWSRIVFPFTFSLFNLVYWLYY 471
>S81944-1|AAB36480.1| 453|Homo sapiens gamma-aminobutyric acid type
A receptor alpha 6 subunit protein.
Length = 453
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIY 530
S ID+ +R+LFP +FA NL YW++Y
Sbjct: 415 SKIDQYSRILFPVAFAGFNLVYWVVY 440
>BC099641-1|AAH99641.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIY 530
S ID+ +R+LFP +FA NL YW++Y
Sbjct: 415 SKIDQYSRILFPVAFAGFNLVYWVVY 440
>BC099640-1|AAH99640.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIY 530
S ID+ +R+LFP +FA NL YW++Y
Sbjct: 415 SKIDQYSRILFPVAFAGFNLVYWVVY 440
>BC096242-1|AAH96242.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIY 530
S ID+ +R+LFP +FA NL YW++Y
Sbjct: 415 SKIDQYSRILFPVAFAGFNLVYWVVY 440
>BC096241-1|AAH96241.1| 453|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 6 protein.
Length = 453
Score = 37.5 bits (83), Expect = 0.043
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIY 530
S ID+ +R+LFP +FA NL YW++Y
Sbjct: 415 SKIDQYSRILFPVAFAGFNLVYWVVY 440
>X52009-1|CAA36258.1| 449|Homo sapiens inhibitory glycine receptor
protein.
Length = 449
Score = 37.1 bits (82), Expect = 0.057
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
I ID+ +R+ FP +F + N+FYW+IY
Sbjct: 409 IQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>BC114967-1|AAI14968.1| 366|Homo sapiens GLRA1 protein protein.
Length = 366
Score = 37.1 bits (82), Expect = 0.057
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
I ID+ +R+ FP +F + N+FYW+IY
Sbjct: 326 IQRAKKIDKISRIGFPMAFLIFNMFYWIIY 355
>BC114947-1|AAI14948.1| 457|Homo sapiens GLRA1 protein protein.
Length = 457
Score = 37.1 bits (82), Expect = 0.057
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
I ID+ +R+ FP +F + N+FYW+IY
Sbjct: 417 IQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>BC074980-1|AAH74980.1| 449|Homo sapiens glycine receptor, alpha 1
(startle disease/hyperekplexia) protein.
Length = 449
Score = 37.1 bits (82), Expect = 0.057
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
I ID+ +R+ FP +F + N+FYW+IY
Sbjct: 409 IQRAKKIDKISRIGFPMAFLIFNMFYWIIY 438
>BC031087-1|AAH31087.1| 465|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, gamma 1 protein.
Length = 465
Score = 37.1 bits (82), Expect = 0.057
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R HI ++ ID +R+ FP +FAL NL YW+ Y +
Sbjct: 431 RIHIR-IAKIDSYSRIFFPTAFALFNLVYWVGYLY 464
>X15376-1|CAA33437.1| 467|Homo sapiens GABA-A receptor gamma 2
subunit protein.
Length = 467
Score = 36.3 bits (80), Expect = 0.099
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R HI ++ +D AR+ FP +F L NL YW+ Y +
Sbjct: 433 RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYLY 466
>X14767-1|CAA32875.1| 474|Homo sapiens GABA-A receptor beta 1
subunit protein.
Length = 474
Score = 36.3 bits (80), Expect = 0.099
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + V+ ID+ +R+ FP +F+L N+ YW+ Y
Sbjct: 428 RIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYY 472
>U93917-1|AAC39917.1| 449|Homo sapiens glycine receptor alpha 3
subunit protein.
Length = 449
Score = 36.3 bits (80), Expect = 0.099
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
I+ ID +R FP +F + N+FYW+IY
Sbjct: 407 IDRAKKIDTISRACFPLAFLIFNIFYWVIY 436
>M86868-1|AAA52510.1| 465|Homo sapiens gamma-amino butyric acid
protein.
Length = 465
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 381 LAGDDRYRRQRQREAGSRG-HINSVSH-IDRAARVLFPASFALLNLFYWMIYA 533
L+G+ R++ G G I +H ID+ +R++FPAS+ NL YW +++
Sbjct: 413 LSGEANAARKKGLLKGQTGFRIFQNTHAIDKYSRLIFPASYIFFNLIYWSVFS 465
>M59216-1|AAA35862.1| 474|Homo sapiens gamma-aminobutyric acid
receptor beta-1 subunit protein.
Length = 474
Score = 36.3 bits (80), Expect = 0.099
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + V+ ID+ +R+ FP +F+L N+ YW+ Y
Sbjct: 428 RIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYY 472
>BC130354-1|AAI30355.1| 465|Homo sapiens gamma-aminobutyric acid
(GABA) receptor, rho 2 protein.
Length = 465
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 381 LAGDDRYRRQRQREAGSRG-HINSVSH-IDRAARVLFPASFALLNLFYWMIYA 533
L+G+ R++ G G I +H ID+ +R++FPAS+ NL YW +++
Sbjct: 413 LSGEANAARKKGLLKGQTGFRIFQNTHAIDKYSRLIFPASYIFFNLIYWSVFS 465
>BC130352-1|AAI30353.1| 465|Homo sapiens gamma-aminobutyric acid
(GABA) receptor, rho 2 protein.
Length = 465
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 381 LAGDDRYRRQRQREAGSRG-HINSVSH-IDRAARVLFPASFALLNLFYWMIYA 533
L+G+ R++ G G I +H ID+ +R++FPAS+ NL YW +++
Sbjct: 413 LSGEANAARKKGLLKGQTGFRIFQNTHAIDKYSRLIFPASYIFFNLIYWSVFS 465
>BC074795-1|AAH74795.1| 467|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, gamma 2 protein.
Length = 467
Score = 36.3 bits (80), Expect = 0.099
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R HI ++ +D AR+ FP +F L NL YW+ Y +
Sbjct: 433 RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYLY 466
>BC069348-1|AAH69348.1| 467|Homo sapiens gamma-aminobutyric acid A
receptor, gamma 2, isoform 2 precursor protein.
Length = 467
Score = 36.3 bits (80), Expect = 0.099
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R HI ++ +D AR+ FP +F L NL YW+ Y +
Sbjct: 433 RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYLY 466
>BC059389-1|AAH59389.1| 475|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, gamma 2 protein.
Length = 475
Score = 36.3 bits (80), Expect = 0.099
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R HI ++ +D AR+ FP +F L NL YW+ Y +
Sbjct: 441 RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYLY 474
>BC036086-1|AAH36086.1| 464|Homo sapiens glycine receptor, alpha 3
protein.
Length = 464
Score = 36.3 bits (80), Expect = 0.099
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
I+ ID +R FP +F + N+FYW+IY
Sbjct: 422 IDRAKKIDTISRACFPLAFLIFNIFYWVIY 451
>AL121833-2|CAC07339.1| 465|Homo sapiens gamma-aminobutyric acid
(GABA) receptor, rho 2 protein.
Length = 465
Score = 36.3 bits (80), Expect = 0.099
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 381 LAGDDRYRRQRQREAGSRG-HINSVSH-IDRAARVLFPASFALLNLFYWMIYA 533
L+G+ R++ G G I +H ID+ +R++FPAS+ NL YW +++
Sbjct: 413 LSGEANAARKKGLLKGQTGFRIFQNTHAIDKYSRLIFPASYIFFNLIYWSVFS 465
>AK127001-1|BAC86784.1| 133|Homo sapiens protein ( Homo sapiens
cDNA FLJ45056 fis, clone BRAWH3023156, highly similar
to Gamma-aminobutyric-acid receptor beta-1 subunit
precursor. ).
Length = 133
Score = 36.3 bits (80), Expect = 0.099
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + V+ ID+ +R+ FP +F+L N+ YW+ Y
Sbjct: 87 RIRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYY 131
>AF165124-1|AAD50273.1| 467|Homo sapiens gamma-aminobutyric acid A
receptor gamma 2 protein.
Length = 467
Score = 36.3 bits (80), Expect = 0.099
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R HI ++ +D AR+ FP +F L NL YW+ Y +
Sbjct: 433 RIHIR-IAKMDSYARIFFPTAFCLFNLVYWVSYLY 466
>AF018157-1|AAC39918.1| 219|Homo sapiens glycine receptor alpha 3
subunit protein.
Length = 219
Score = 36.3 bits (80), Expect = 0.099
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
I+ ID +R FP +F + N+FYW+IY
Sbjct: 177 IDRAKKIDTISRACFPLAFLIFNIFYWVIY 206
>AF017724-1|AAC39919.1| 465|Homo sapiens glycine receptor alpha 3
subunit protein.
Length = 465
Score = 36.3 bits (80), Expect = 0.099
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
I+ ID +R FP +F + N+FYW+IY
Sbjct: 422 IDRAKKIDTISRACFPLAFLIFNIFYWVIY 451
>U95367-1|AAC51357.1| 440|Homo sapiens GABA-A receptor pi subunit
protein.
Length = 440
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
I + S++D +++LFP F L N+FYW Y +
Sbjct: 408 IQNPSNVDHYSKLLFPLIFMLANVFYWAYYMY 439
>S77554-1|AAB33983.1| 474|Homo sapiens GABAA receptor beta 2
subunit protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + + V+ IDR +R+ FP F+ N+ YW+ Y
Sbjct: 428 RLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 472
>S77553-1|AAB33982.1| 512|Homo sapiens GABAA receptor beta 2
subunit protein.
Length = 512
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + + V+ IDR +R+ FP F+ N+ YW+ Y
Sbjct: 466 RLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 510
>S67368-1|AAB29370.1| 474|Homo sapiens gamma-aminobutyric acid A
receptor beta 2 subunit protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + + V+ IDR +R+ FP F+ N+ YW+ Y
Sbjct: 428 RLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 472
>BC109106-1|AAI09107.1| 440|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, pi protein.
Length = 440
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
I + S++D +++LFP F L N+FYW Y +
Sbjct: 408 IQNPSNVDHYSKLLFPLIFMLANVFYWAYYMY 439
>BC109105-1|AAI09106.1| 440|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, pi protein.
Length = 440
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
I + S++D +++LFP F L N+FYW Y +
Sbjct: 408 IQNPSNVDHYSKLLFPLIFMLANVFYWAYYMY 439
>BC105639-1|AAI05640.1| 474|Homo sapiens GABRB2 protein protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + + V+ IDR +R+ FP F+ N+ YW+ Y
Sbjct: 428 RLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 472
>BC099719-1|AAH99719.1| 474|Homo sapiens GABRB2 protein protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + + V+ IDR +R+ FP F+ N+ YW+ Y
Sbjct: 428 RLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 472
>BC099705-1|AAH99705.1| 474|Homo sapiens GABRB2 protein protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + + V+ IDR +R+ FP F+ N+ YW+ Y
Sbjct: 428 RLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 472
>BC074865-1|AAH74865.1| 440|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, pi protein.
Length = 440
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
I + S++D +++LFP F L N+FYW Y +
Sbjct: 408 IQNPSNVDHYSKLLFPLIFMLANVFYWAYYMY 439
>BC074810-1|AAH74810.1| 440|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, pi protein.
Length = 440
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
I + S++D +++LFP F L N+FYW Y +
Sbjct: 408 IQNPSNVDHYSKLLFPLIFMLANVFYWAYYMY 439
>BC022449-1|AAH22449.1| 474|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, beta 1 protein.
Length = 474
Score = 35.9 bits (79), Expect = 0.13
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 396 RYRRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
R RR+ + + V+ ID+ +R+ FP +F+L N+ YW+ Y
Sbjct: 428 RNRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYY 472
>AF009702-1|AAC24194.1| 440|Homo sapiens GABA-A receptor pi subunit
protein.
Length = 440
Score = 35.9 bits (79), Expect = 0.13
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
I + S++D +++LFP F L N+FYW Y +
Sbjct: 408 IQNPSNVDHYSKLLFPLIFMLANVFYWAYYMY 439
>S82769-1|AAB39369.1| 467|Homo sapiens GABAA receptor gamma 3
subunit protein.
Length = 467
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R HI+ + +D +RV FP SF L NL YW+ Y +
Sbjct: 433 RIHID-ILELDSYSRVFFPTSFLLFNLVYWVGYLY 466
>AF269144-1|AAF99698.1| 467|Homo sapiens GABAA receptor gamma 3
subunit protein.
Length = 467
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R HI+ + +D +RV FP SF L NL YW+ Y +
Sbjct: 433 RIHID-ILELDSYSRVFFPTSFLLFNLVYWVGYLY 466
>AF228458-1|AAF63215.1| 449|Homo sapiens GABAA receptor gamma 3
subunit protein.
Length = 449
Score = 35.5 bits (78), Expect = 0.17
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R HI+ + +D +RV FP SF L NL YW+ Y +
Sbjct: 415 RIHID-ILELDSYSRVFFPTSFLLFNLVYWVGYLY 448
>BC033801-1|AAH33801.1| 452|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, delta protein.
Length = 452
Score = 35.1 bits (77), Expect = 0.23
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYA 533
ID AR +FPA+FA +N+ YW YA
Sbjct: 427 IDIYARAVFPAAFAAVNVIYWAAYA 451
>AL391845-4|CAI15436.1| 452|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, delta protein.
Length = 452
Score = 35.1 bits (77), Expect = 0.23
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYA 533
ID AR +FPA+FA +N+ YW YA
Sbjct: 427 IDIYARAVFPAAFAAVNVIYWAAYA 451
>AF016917-1|AAB70007.1| 452|Homo sapiens GABA-A receptor delta
subunit protein.
Length = 452
Score = 35.1 bits (77), Expect = 0.23
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYA 533
ID AR +FPA+FA +N+ YW YA
Sbjct: 427 IDIYARAVFPAAFAAVNVIYWAAYA 451
>X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine receptor
protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.30
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 420 EAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
+A + ++ ID +R FP +F + N+FYW+ Y
Sbjct: 405 DAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
>CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.30
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 420 EAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
+A + ++ ID +R FP +F + N+FYW+ Y
Sbjct: 405 DAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
>BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha 2
protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.30
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 420 EAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
+A + ++ ID +R FP +F + N+FYW+ Y
Sbjct: 405 DAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
>AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2
subunit B protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.30
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 420 EAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
+A + ++ ID +R FP +F + N+FYW+ Y
Sbjct: 405 DAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
>AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2
subunit A protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.30
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 420 EAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
+A + ++ ID +R FP +F + N+FYW+ Y
Sbjct: 405 DAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
>AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha 2
subunit protein.
Length = 452
Score = 34.7 bits (76), Expect = 0.30
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 420 EAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
+A + ++ ID +R FP +F + N+FYW+ Y
Sbjct: 405 DAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
>BC109211-1|AAI09212.1| 632|Homo sapiens gamma-aminobutyric acid
(GABA) receptor, theta protein.
Length = 632
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 450 VSHIDRAARVLFPASFALLNLFYWMIYAF 536
V +D+ +R LFP +F L N+ YW+ + +
Sbjct: 604 VPKVDKWSRFLFPLAFGLFNIVYWVYHMY 632
>BC109210-1|AAI09211.1| 632|Homo sapiens gamma-aminobutyric acid
(GABA) receptor, theta protein.
Length = 632
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 450 VSHIDRAARVLFPASFALLNLFYWMIYAF 536
V +D+ +R LFP +F L N+ YW+ + +
Sbjct: 604 VPKVDKWSRFLFPLAFGLFNIVYWVYHMY 632
>AF189259-1|AAF70380.1| 632|Homo sapiens GABA-A receptor theta
subunit protein.
Length = 632
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 450 VSHIDRAARVLFPASFALLNLFYWMIYAF 536
V +D+ +R LFP +F L N+ YW+ + +
Sbjct: 604 VPKVDKWSRFLFPLAFGLFNIVYWVYHMY 632
>AF144648-1|AAD51172.1| 627|Homo sapiens GABA-A receptor theta
protein.
Length = 627
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 450 VSHIDRAARVLFPASFALLNLFYWMIYAF 536
V +D+ +R LFP +F L N+ YW+ + +
Sbjct: 599 VPKVDKWSRFLFPLAFGLFNIVYWVYHMY 627
>U33267-1|AAB37750.1| 497|Homo sapiens glycine receptor beta
subunit protein.
Length = 497
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIY 530
+ ID AR LFP F N+ YW IY
Sbjct: 469 AAKRIDLYARALFPFCFLFFNVIYWSIY 496
>BC032635-1|AAH32635.1| 497|Homo sapiens glycine receptor, beta
protein.
Length = 497
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIY 530
+ ID AR LFP F N+ YW IY
Sbjct: 469 AAKRIDLYARALFPFCFLFFNVIYWSIY 496
>AF094755-1|AAC71034.1| 497|Homo sapiens glycine receptor beta
subunit precursor protein.
Length = 497
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIY 530
+ ID AR LFP F N+ YW IY
Sbjct: 469 AAKRIDLYARALFPFCFLFFNVIYWSIY 496
>AF094754-1|AAC71033.1| 497|Homo sapiens glycine receptor beta
subunit precursor protein.
Length = 497
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIY 530
+ ID AR LFP F N+ YW IY
Sbjct: 469 AAKRIDLYARALFPFCFLFFNVIYWSIY 496
>BC050330-1|AAH50330.1| 1459|Homo sapiens ALMS1 protein protein.
Length = 1459
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 393 DRYRRQRQREAGSRGHINSVSHIDRAARVL 482
+R R+QRQ E G R ++ V +DR A++L
Sbjct: 1207 ERQRQQRQPELGDRKELSLVDRLDRLAKIL 1236
>BC035025-1|AAH35025.1| 1459|Homo sapiens ALMS1 protein protein.
Length = 1459
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 393 DRYRRQRQREAGSRGHINSVSHIDRAARVL 482
+R R+QRQ E G R ++ V +DR A++L
Sbjct: 1207 ERQRQQRQPELGDRKELSLVDRLDRLAKIL 1236
>AJ417593-1|CAD10391.2| 4169|Homo sapiens ALMS1 protein protein.
Length = 4169
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 393 DRYRRQRQREAGSRGHINSVSHIDRAARVL 482
+R R+QRQ E G R ++ V +DR A++L
Sbjct: 3608 ERQRQQRQPELGDRKELSLVDRLDRLAKIL 3637
>AC096546-1|AAX82023.1| 1291|Homo sapiens unknown protein.
Length = 1291
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 393 DRYRRQRQREAGSRGHINSVSHIDRAARVL 482
+R R+QRQ E G R ++ V +DR A++L
Sbjct: 1049 ERQRQQRQPELGDRKELSLVDRLDRLAKIL 1078
>AB002326-1|BAA20786.3| 2055|Homo sapiens KIAA0328 protein protein.
Length = 2055
Score = 31.5 bits (68), Expect = 2.8
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 393 DRYRRQRQREAGSRGHINSVSHIDRAARVL 482
+R R+QRQ E G R ++ V +DR A++L
Sbjct: 1541 ERQRQQRQPELGDRKELSLVDRLDRLAKIL 1570
>Y09765-1|CAA70904.1| 506|Homo sapiens GABA receptor epsilon
subunit protein.
Length = 506
Score = 31.1 bits (67), Expect = 3.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 450 VSHIDRAARVLFPASFALLNLFYWMI 527
V +D +RV+FP +F N+ YW++
Sbjct: 477 VYRLDNYSRVVFPVTFFFFNVLYWLV 502
>Y07637-1|CAA68914.1| 505|Homo sapiens putative GABA-gated chloride
channel protein.
Length = 505
Score = 31.1 bits (67), Expect = 3.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 450 VSHIDRAARVLFPASFALLNLFYWMI 527
V +D +RV+FP +F N+ YW++
Sbjct: 476 VYRLDNYSRVVFPVTFFFFNVLYWLV 501
>U92283-1|AAB94645.1| 506|Homo sapiens GABA-A receptor epsilon
subunit protein.
Length = 506
Score = 31.1 bits (67), Expect = 3.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 450 VSHIDRAARVLFPASFALLNLFYWMI 527
V +D +RV+FP +F N+ YW++
Sbjct: 477 VYRLDNYSRVVFPVTFFFFNVLYWLV 502
>U66661-1|AAB49284.1| 506|Homo sapiens GABA-A receptor epsilon
subunit protein.
Length = 506
Score = 31.1 bits (67), Expect = 3.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 450 VSHIDRAARVLFPASFALLNLFYWMI 527
V +D +RV+FP +F N+ YW++
Sbjct: 477 VYRLDNYSRVVFPVTFFFFNVLYWLV 502
>AL669831-3|CAM12826.1| 163|Homo sapiens novel protein protein.
Length = 163
Score = 30.3 bits (65), Expect = 6.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 270 TTSDNLETEQPVAVRL-TMERTTQTETRVPRWRQLLYCLAGDDRYRRQRQREAGSR 434
TT L P+AV + + TE R P W+ LL+CLA D ++ + + R
Sbjct: 71 TTLVLLHNRLPLAVTVGCLPSRCPTEKRAPPWQGLLHCLAVDVEVGQESEEKTERR 126
>Y09763-1|CAA70903.1| 506|Homo sapiens GABRE protein.
Length = 506
Score = 29.9 bits (64), Expect = 8.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 450 VSHIDRAARVLFPASFALLNLFYWM 524
V +D +RV+FP +F N+ YW+
Sbjct: 477 VYRLDNYSRVVFPVTFFFFNVLYWL 501
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,662,630
Number of Sequences: 237096
Number of extensions: 1643274
Number of successful extensions: 2833
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 2754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2833
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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