Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28h05
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50027-7|CAA90332.3| 460|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z50027-6|CAO82026.1| 564|Caenorhabditis elegans Hypothetical pr... 39 0.003
AC006748-3|AAF60513.2| 382|Caenorhabditis elegans Hypothetical ... 38 0.005
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A recept... 38 0.006
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 38 0.009
Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical pr... 37 0.011
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 36 0.020
Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical pr... 36 0.026
AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical... 36 0.026
AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical... 36 0.026
U14635-11|AAK84494.2| 500|Caenorhabditis elegans Glutamate-gate... 35 0.060
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 34 0.079
Z50016-11|CAL22700.1| 157|Caenorhabditis elegans Hypothetical p... 34 0.10
Z50016-10|CAL22699.1| 264|Caenorhabditis elegans Hypothetical p... 34 0.10
Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 34 0.10
AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GA... 34 0.10
AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GA... 34 0.10
U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical pr... 33 0.18
AY849796-1|AAW34234.1| 517|Caenorhabditis elegans acetylcholine... 33 0.18
Z93397-7|CAB07722.2| 483|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z93372-6|CAB07549.2| 483|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z50016-2|CAC42346.1| 487|Caenorhabditis elegans Hypothetical pr... 31 0.56
AF151640-1|AAD42382.1| 487|Caenorhabditis elegans ionotropic GA... 31 0.56
Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical pr... 31 0.74
U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered averme... 31 0.74
U42836-2|ABC48244.1| 278|Caenorhabditis elegans Hypothetical pr... 31 0.74
U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical pr... 31 0.74
U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amin... 31 0.74
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z50016-5|CAC42349.1| 506|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z50016-4|CAC42348.1| 475|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z50016-3|CAC42347.1| 487|Caenorhabditis elegans Hypothetical pr... 31 0.98
U40422-5|AAA81448.2| 494|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF151643-1|AAD42385.1| 506|Caenorhabditis elegans ionotropic GA... 31 0.98
AF151642-1|AAD42384.1| 475|Caenorhabditis elegans ionotropic GA... 31 0.98
AF151641-1|AAD42383.1| 487|Caenorhabditis elegans ionotropic GA... 31 0.98
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 29 2.3
U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeas... 29 2.3
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 29 2.3
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 29 2.3
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 29 3.0
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 29 3.0
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 29 3.0
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical pr... 29 3.9
U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated... 29 3.9
AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gat... 29 3.9
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 28 5.2
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 28 5.2
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 28 6.9
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 28 6.9
Z93778-5|CAB07844.2| 336|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z50027-7|CAA90332.3| 460|Caenorhabditis elegans Hypothetical
protein C39B10.2a protein.
Length = 460
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 429 SRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
S H ID++ R LFPA+F L N+FYW Y
Sbjct: 417 SANHSRHALKIDKSCRYLFPAAFLLWNVFYWWYY 450
>Z50027-6|CAO82026.1| 564|Caenorhabditis elegans Hypothetical
protein C39B10.2b protein.
Length = 564
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 429 SRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
S H ID++ R LFPA+F L N+FYW Y
Sbjct: 521 SANHSRHALKIDKSCRYLFPAAFLLWNVFYWWYY 554
>AC006748-3|AAF60513.2| 382|Caenorhabditis elegans Hypothetical
protein Y39A3B.2 protein.
Length = 382
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
ID+AAR FP FA+ N+FYW+ Y
Sbjct: 351 IDKAARFAFPCVFAIFNVFYWLYY 374
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 408 QRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
+R R+ + V+ ID+ +RV+FP F + NLFYW Y
Sbjct: 505 RRARKVIPTIRVRDVNLIDKYSRVVFPVCFIVFNLFYWSYY 545
>AF498370-1|AAN65376.1| 550|Caenorhabditis elegans GABA-A receptor
subunit protein.
Length = 550
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 408 QRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIY 530
+R R+ + V+ ID+ +RV+FP F + NLFYW Y
Sbjct: 505 RRARKVIPTIRVRDVNLIDKYSRVVFPVCFIVFNLFYWSYY 545
>AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical
protein Y73F8A.2 protein.
Length = 434
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
IDR A +LFP FAL NL YW Y +S
Sbjct: 401 IDRVASMLFPTMFALFNLVYWAYYLTTS 428
>Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical
protein C09G5.1 protein.
Length = 473
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
IDR +R LFP +F + N+FYW+ Y
Sbjct: 437 IDRYSRALFPLAFIIFNIFYWIYY 460
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIYAFSSD 545
I SV +DR + ++FP SF + N+ YW IY D
Sbjct: 440 ITSVQ-VDRCSMIMFPLSFLIFNVVYWSIYFMKMD 473
>Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical
protein K10D6.1 protein.
Length = 457
Score = 35.9 bits (79), Expect = 0.026
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIY 530
S IDR + ++FPA FA+ N+ YW Y
Sbjct: 412 SPEKIDRVSAIMFPACFAIFNIVYWSYY 439
>AL132858-16|CAB60486.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 402 RRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDD 548
+R+++ +G + +DR + LFP +F NL YWM Y S D
Sbjct: 490 KRRKRLMSGKLFQRWTAEDMDRFCQKLFPITFTFCNLIYWMYYTAKSKD 538
>AL117207-25|CAB61042.2| 538|Caenorhabditis elegans Hypothetical
protein Y113G7A.5 protein.
Length = 538
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 402 RRQRQREAGSRGHINSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDD 548
+R+++ +G + +DR + LFP +F NL YWM Y S D
Sbjct: 490 KRRKRLMSGKLFQRWTAEDMDRFCQKLFPITFTFCNLIYWMYYTAKSKD 538
>U14635-11|AAK84494.2| 500|Caenorhabditis elegans Glutamate-gated
chloride channelprotein 4 protein.
Length = 500
Score = 34.7 bits (76), Expect = 0.060
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSSD 545
ID AR++FP +F L N YW IY D
Sbjct: 468 IDIIARIIFPLAFILFNFAYWSIYLEEED 496
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 34.3 bits (75), Expect = 0.079
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
N ID+ +R +FP +F + NL YW+ Y +
Sbjct: 513 NRAKKIDQTSRWIFPLTFIIFNLTYWIYYLY 543
>Z50016-11|CAL22700.1| 157|Caenorhabditis elegans Hypothetical
protein T21C12.1i protein.
Length = 157
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIYAFSS 542
S SHID +R FP F L N +W+I + S
Sbjct: 106 SHSHIDIVSRAAFPLVFILFNTLFWLILLYKS 137
>Z50016-10|CAL22699.1| 264|Caenorhabditis elegans Hypothetical
protein T21C12.1h protein.
Length = 264
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIYAFSS 542
S SHID +R FP F L N +W+I + S
Sbjct: 213 SHSHIDIVSRAAFPLVFILFNTLFWLILLYKS 244
>Z50016-6|CAC42350.1| 448|Caenorhabditis elegans Hypothetical
protein T21C12.1f protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIYAFSS 542
S SHID +R FP F L N +W+I + S
Sbjct: 397 SHSHIDIVSRAAFPLVFILFNTLFWLILLYKS 428
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical protein
T21C12.1a protein.
Length = 1106
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIYAFSS 542
S SHID +R FP F L N +W+I + S
Sbjct: 1055 SHSHIDIVSRAAFPLVFILFNTLFWLILLYKS 1086
>AF151645-1|AAD42387.1| 264|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49Cshort protein.
Length = 264
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIYAFSS 542
S SHID +R FP F L N +W+I + S
Sbjct: 213 SHSHIDIVSRAAFPLVFILFNTLFWLILLYKS 244
>AF151644-1|AAD42386.1| 448|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49C protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIYAFSS 542
S SHID +R FP F L N +W+I + S
Sbjct: 397 SHSHIDIVSRAAFPLVFILFNTLFWLILLYKS 428
>U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical
protein F55D10.5 protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIY 530
+ IDR + ++FP F L N+ YW Y
Sbjct: 485 TTEEIDRLSMIMFPGLFTLFNIIYWTYY 512
>AY849796-1|AAW34234.1| 517|Caenorhabditis elegans
acetylcholine-gated chloride channelsubunit ACC-3
protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 447 SVSHIDRAARVLFPASFALLNLFYWMIY 530
+ IDR + ++FP F L N+ YW Y
Sbjct: 485 TTEEIDRLSMIMFPGLFTLFNIIYWTYY 512
>Z93397-7|CAB07722.2| 483|Caenorhabditis elegans Hypothetical
protein ZC482.5 protein.
Length = 483
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +3
Query: 315 LTMERTTQTETRVPRWRQLLYC--LAGDDRYRRQRQREAGSRGHINS------VSHIDRA 470
LT+E+ VP W++L + + R + A ++ + + V+ ID
Sbjct: 385 LTVEKEEARLKAVPWWKKLCFKDEQGNTSMFYRMAVKAAIAKKTLRNGDPAEVVNKIDNF 444
Query: 471 ARVLFPASFALLNLFYWMIY 530
+++ FP + + N+FYW+ Y
Sbjct: 445 SKLAFPTLYIIFNVFYWVAY 464
>Z93372-6|CAB07549.2| 483|Caenorhabditis elegans Hypothetical
protein ZC482.5 protein.
Length = 483
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +3
Query: 315 LTMERTTQTETRVPRWRQLLYC--LAGDDRYRRQRQREAGSRGHINS------VSHIDRA 470
LT+E+ VP W++L + + R + A ++ + + V+ ID
Sbjct: 385 LTVEKEEARLKAVPWWKKLCFKDEQGNTSMFYRMAVKAAIAKKTLRNGDPAEVVNKIDNF 444
Query: 471 ARVLFPASFALLNLFYWMIY 530
+++ FP + + N+FYW+ Y
Sbjct: 445 SKLAFPTLYIIFNVFYWVAY 464
>Z82059-5|CAB04879.2| 408|Caenorhabditis elegans Hypothetical
protein T27E9.9 protein.
Length = 408
Score = 31.9 bits (69), Expect = 0.42
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
ID+ + ++FP SF N++YW I+
Sbjct: 376 IDQMSSIVFPVSFLAFNIWYWFIF 399
>Z50016-2|CAC42346.1| 487|Caenorhabditis elegans Hypothetical
protein T21C12.1b protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIY 530
S+ID+ +R LFP+ F L N+ YW +
Sbjct: 446 SNIDKYSRSLFPSIFVLFNVGYWAYF 471
>AF151640-1|AAD42382.1| 487|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49A protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIY 530
S+ID+ +R LFP+ F L N+ YW +
Sbjct: 446 SNIDKYSRSLFPSIFVLFNVGYWAYF 471
>Z49888-6|CAD44128.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 31.1 bits (67), Expect = 0.74
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
+D +R++FP F N YW +Y
Sbjct: 396 LDNTSRLMFPVVFTFYNFIYWFVY 419
>Z49888-5|CAA90065.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 31.1 bits (67), Expect = 0.74
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
+D +R++FP F N YW +Y
Sbjct: 377 LDNTSRLMFPVVFTFYNFIYWFVY 400
>Z47069-5|CAD44131.1| 428|Caenorhabditis elegans Hypothetical
protein F47A4.1b protein.
Length = 428
Score = 31.1 bits (67), Expect = 0.74
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
+D +R++FP F N YW +Y
Sbjct: 396 LDNTSRLMFPVVFTFYNFIYWFVY 419
>Z47069-4|CAA87339.2| 409|Caenorhabditis elegans Hypothetical
protein F47A4.1a protein.
Length = 409
Score = 31.1 bits (67), Expect = 0.74
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
+D +R++FP F N YW +Y
Sbjct: 377 LDNTSRLMFPVVFTFYNFIYWFVY 400
>U97196-14|AAK68665.2| 416|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform a protein.
Length = 416
Score = 31.1 bits (67), Expect = 0.74
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
ID +R++FP +A N+ YW +Y
Sbjct: 391 IDVVSRLVFPIGYACFNVLYWAVY 414
>U42836-2|ABC48244.1| 278|Caenorhabditis elegans Hypothetical
protein T21F2.1b protein.
Length = 278
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSSDDF 551
ID + LFP F N+FYW Y S F
Sbjct: 247 IDEISAKLFPLLFTAFNIFYWFYYIGMSGGF 277
>U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical
protein T21F2.1a protein.
Length = 497
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSSDDF 551
ID + LFP F N+FYW Y S F
Sbjct: 466 IDEISAKLFPLLFTAFNIFYWFYYIGMSGGF 496
>U40573-1|AAC25481.1| 416|Caenorhabditis elegans inhibitory amino
acid receptorsubunit gbr-2A protein.
Length = 416
Score = 31.1 bits (67), Expect = 0.74
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
ID +R++FP +A N+ YW +Y
Sbjct: 391 IDVVSRLVFPIGYACFNVLYWAVY 414
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
ID + V+FP SF + N+ YW Y
Sbjct: 405 IDSISSVMFPFSFFVFNIIYWFYY 428
>Z50016-5|CAC42349.1| 506|Caenorhabditis elegans Hypothetical
protein T21C12.1e protein.
Length = 506
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID+ +R FP SF++ N+ YW+ + S
Sbjct: 462 IDKLSRYGFPLSFSIFNIVYWLYMKYLS 489
>Z50016-4|CAC42348.1| 475|Caenorhabditis elegans Hypothetical
protein T21C12.1d protein.
Length = 475
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID+ +R FP SF++ N+ YW+ + S
Sbjct: 431 IDKLSRYGFPLSFSIFNIVYWLYMKYLS 458
>Z50016-3|CAC42347.1| 487|Caenorhabditis elegans Hypothetical
protein T21C12.1c protein.
Length = 487
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID+ +R FP SF++ N+ YW+ + S
Sbjct: 443 IDKLSRYGFPLSFSIFNIVYWLYMKYLS 470
>U40422-5|AAA81448.2| 494|Caenorhabditis elegans Hypothetical
protein T24D8.1 protein.
Length = 494
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIY 530
ID R++FP F L N+ YW Y
Sbjct: 467 IDERCRIVFPMIFLLFNVAYWSFY 490
>AF151643-1|AAD42385.1| 506|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49B.3 protein.
Length = 506
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID+ +R FP SF++ N+ YW+ + S
Sbjct: 462 IDKLSRYGFPLSFSIFNIVYWLYMKYLS 489
>AF151642-1|AAD42384.1| 475|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49B.2 protein.
Length = 475
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID+ +R FP SF++ N+ YW+ + S
Sbjct: 431 IDKLSRYGFPLSFSIFNIVYWLYMKYLS 458
>AF151641-1|AAD42383.1| 487|Caenorhabditis elegans ionotropic GABA
receptor subunitUNC-49B.1 protein.
Length = 487
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID+ +R FP SF++ N+ YW+ + S
Sbjct: 443 IDKLSRYGFPLSFSIFNIVYWLYMKYLS 470
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 429 SRGHINSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDDFAWSDNPI 572
S+ + V H+D A R+L S LLNLF M+ A D A D I
Sbjct: 803 SKQFLEFVQHVDSAYRILRRHSNVLLNLFSLMLDAGIPDIAAEPDKAI 850
>U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform b
protein.
Length = 650
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 429 SRGHINSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDDFAWSDNPI 572
S+ + V H+D A R+L S LLNLF M+ A D A D I
Sbjct: 556 SKQFLEFVQHVDSAYRILRRHSNVLLNLFSLMLDAGIPDIAAEPDKAI 603
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 429 SRGHINSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDDFAWSDNPI 572
S+ + V H+D A R+L S LLNLF M+ A D A D I
Sbjct: 803 SKQFLEFVQHVDSAYRILRRHSNVLLNLFSLMLDAGIPDIAAEPDKAI 850
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 429 SRGHINSVSHIDRAARVLFPASFALLNLFYWMIYAFSSDDFAWSDNPI 572
S+ + V H+D A R+L S LLNLF M+ A D A D I
Sbjct: 807 SKQFLEFVQHVDSAYRILRRHSNVLLNLFSLMLDAGIPDIAAEPDKAI 854
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSSDD 548
+D+ + V FP +F + NL YW Y + D
Sbjct: 456 VDKFSIVAFPLAFTMFNLVYWWHYLSQTFD 485
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSSDD 548
+D+ + V FP +F + NL YW Y + D
Sbjct: 442 VDKFSIVAFPLAFTMFNLVYWWHYLSQTFD 471
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSSDD 548
+D+ + V FP +F + NL YW Y + D
Sbjct: 456 VDKFSIVAFPLAFTMFNLVYWWHYLSQTFD 485
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 424 ASRCLCRL*RSSPAKQYKSCLQRGT 350
+SRC R+ R SP +Y C QR T
Sbjct: 1166 SSRCASRICRQSPVLRYSICCQRRT 1190
>Z68217-3|CAA92466.2| 466|Caenorhabditis elegans Hypothetical
protein F58G6.4 protein.
Length = 466
Score = 28.7 bits (61), Expect = 3.9
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSSDDF 551
+D + + FP ++ L N+ YW Y S ++
Sbjct: 426 VDFYSAIFFPTAYMLFNISYWSFYLTSLSEY 456
>U64840-1|AAB04959.2| 484|Caenorhabditis elegans Glutamate-gated
chloride channelprotein 3 protein.
Length = 484
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIYA 533
++ D +RVLFP F N YW Y+
Sbjct: 447 DNAKRADLISRVLFPTLFVCFNFVYWTKYS 476
>AJ243914-1|CAB51708.1| 484|Caenorhabditis elegans Glutamate-gated
chloride channelsubunit protein.
Length = 484
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 444 NSVSHIDRAARVLFPASFALLNLFYWMIYA 533
++ D +RVLFP F N YW Y+
Sbjct: 447 DNAKRADLISRVLFPTLFVCFNFVYWTKYS 476
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 444 NSVS-HIDRAARVLFPASFALLNLFYW 521
N +S +D +R LFP F + N+ YW
Sbjct: 425 NDISKRVDLISRALFPVLFFVFNILYW 451
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 444 NSVS-HIDRAARVLFPASFALLNLFYW 521
N +S +D +R LFP F + N+ YW
Sbjct: 425 NDISKRVDLISRALFPVLFFVFNILYW 451
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 572 NGIVAPGKVITREGIYHPVE*IEQCKRSRE*N 477
NGI+ V+ R+ YH E ++ + SRE N
Sbjct: 290 NGIIIMYSVVDRQSFYHAAEIFKRLEHSREHN 321
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID +R LFP F+L + YW+ + + S
Sbjct: 531 IDEYSRWLFPTVFSLFCVSYWLYFTWRS 558
>Z93778-5|CAB07844.2| 336|Caenorhabditis elegans Hypothetical
protein C31H5.1 protein.
Length = 336
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 90 ITLFI*VGSGEIVIDDSEWEELIEEVGGD 176
I +F GS + ++D+S+ EEL GGD
Sbjct: 246 IRMFYAYGSKDFLVDESDSEELAMHFGGD 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,442,838
Number of Sequences: 27780
Number of extensions: 244335
Number of successful extensions: 719
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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