Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28h05
(669 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 119 2e-29
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 46 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 5e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 39 5e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 9e-05
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 37 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 3e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 34 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 34 0.001
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 33 0.003
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 32 0.004
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.28
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.5
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 23 3.5
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 21 8.0
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 8.0
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 119 bits (287), Expect = 2e-29
Identities = 54/98 (55%), Positives = 72/98 (73%), Gaps = 9/98 (9%)
Frame = +3
Query: 318 TMERTTQTETRVPRWRQLLYCLAGDDRYRRQRQREAGS----RG-----HINSVSHIDRA 470
TMER TQTE +P+WRQ LYCLAGD+ +R++RQREA RG HINSVS+ID+
Sbjct: 412 TMERQTQTEVWIPKWRQFLYCLAGDESFRKRRQREAAGNCRKRGEKIARHINSVSYIDKV 471
Query: 471 ARVLFPASFALLNLFYWMIYAFSSDDFAWSDNPINTLS 584
AR++FPASF LLN+ YW+IY ++F W D+P+ ++S
Sbjct: 472 ARIVFPASFGLLNICYWVIYVTYQEEFKWQDSPLGSIS 509
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 46.4 bits (105), Expect = 2e-07
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
Frame = +3
Query: 249 PSQSSNPTTSDNLETEQPVAVRLTMERTTQTE----TRVPR---------WRQLLYCLAG 389
P SN T+ NL T + + TM E + +P W+ +
Sbjct: 335 PITQSNKRTAGNLATREHPSRNFTMSEDGMIEVIPLSAIPEPSKNPAMGHWQMSCVACSP 394
Query: 390 DDRYRRQRQREAGSRGH-----INSVSHIDRAARVLFPASFALLNLFYWMIYAFSSD 545
R ++E+G R NSVS IDRA+R++FP F +N+FYW Y S+
Sbjct: 395 PPRQTPPSRKESGRRRRRRTPRYNSVSKIDRASRIVFPLFFLAINVFYWFAYLSRSE 451
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 5e-05
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIYAFSSD 545
S ID+ +R++FP F NL YW+IY SD
Sbjct: 402 SDIDKYSRIVFPVCFVCFNLMYWIIYLHISD 432
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 5e-05
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIYAFSSD 545
S ID+ +R++FP F NL YW+IY SD
Sbjct: 402 SDIDKYSRIVFPVCFVCFNLMYWIIYLHISD 432
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.9 bits (84), Expect = 9e-05
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 441 INSVSHIDRAARVLFPASFALLNLFYWMIY 530
I V+ ID+ +R++FP SF L N YW+ Y
Sbjct: 458 IKDVNIIDKYSRIIFPVSFMLFNAIYWIFY 487
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 37.1 bits (82), Expect = 2e-04
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +3
Query: 456 HIDRAARVLFPASFALLNLFYWMIYA 533
+IDR +RV FP FA+LN+ YW+++A
Sbjct: 400 NIDRVSRVFFPFLFAVLNVTYWIMFA 425
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.3 bits (80), Expect = 3e-04
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 453 SHIDRAARVLFPASFALLNLFYWMIY 530
S ID+ +R++FP F NL YW+IY
Sbjct: 340 SDIDKYSRIVFPVCFVCFNLMYWIIY 365
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.9 bits (74), Expect = 0.001
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSSDD 548
ID +R+ FP FA NL YW Y F ++
Sbjct: 415 IDVISRIFFPIVFAFFNLAYWSTYLFREEE 444
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.9 bits (74), Expect = 0.001
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSSDD 548
ID +R+ FP FA NL YW Y F ++
Sbjct: 415 IDVISRIFFPIVFAFFNLAYWSTYLFREEE 444
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 32.7 bits (71), Expect = 0.003
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYW 521
IDR +R++FP +F + N+ YW
Sbjct: 444 IDRRSRIVFPVAFIIFNILYW 464
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 32.3 bits (70), Expect = 0.004
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 456 HIDRAARVLFPASFALLNLFYWMIY 530
+ID+ +R FP SF +LN+ YW +
Sbjct: 358 YIDKVSRFFFPFSFLILNVVYWSTF 382
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.2 bits (55), Expect = 0.28
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 432 RGHINSVSHIDRAARVLFPASFALLNLFYWMIYAF 536
R H ID +R+ FP F L + YW I F
Sbjct: 353 RVHKTQSQTIDIYSRIGFPILFMLFIILYWPILLF 387
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID AR+ FP ++ + F+++ Y +S
Sbjct: 462 IDVIARITFPVAYFMFLTFFFIHYKGTS 489
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID AR+ FP ++ + F+++ Y +S
Sbjct: 448 IDVIARITFPVAYFMFLTFFFIHYKGTS 475
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID AR+ FP ++ + F+++ Y +S
Sbjct: 482 IDVIARITFPVAYFMFLTFFFIHYKGTS 509
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 459 IDRAARVLFPASFALLNLFYWMIYAFSS 542
ID AR+ FP ++ + F+++ Y +S
Sbjct: 431 IDVIARITFPVAYFMFLTFFFIHYKGTS 458
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 433 GDTSTASHTSTGLH 474
GD+ +SH+S G+H
Sbjct: 72 GDSPVSSHSSNGIH 85
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 28 SYIVILYKLYTLNWDSFNNSL 90
+Y+V KL L WD +SL
Sbjct: 130 TYLVTRQKLLELGWDVLPHSL 150
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 267 PTTSDNLETEQPVAVRLTMERTTQTETRVPRWRQLLYC 380
P +S L T AVR+ + +P W+ L C
Sbjct: 229 PDSSSELATRLAEAVRIHFTASRDAFYGLPLWKLLPTC 266
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,917
Number of Sequences: 438
Number of extensions: 3724
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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