Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28h02
         (446 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ187517-1|ABA26053.1|   96|Homo sapiens immunoglobulin light ch...    31   2.4  
AK126960-1|BAC86763.1|  126|Homo sapiens protein ( Homo sapiens ...    30   4.1  
AB208874-1|BAD92111.1|  724|Homo sapiens proprotein convertase s...    30   4.1  

>DQ187517-1|ABA26053.1|   96|Homo sapiens immunoglobulin light chain
           variable region protein.
          Length = 96

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -3

Query: 336 LNMAPIFLPVLPGSFAILKCRFKYPIIRLEVRPSLDGILWK 214
           L  +P+FLPV PG  A + CR    ++       LD  L K
Sbjct: 4   LTQSPLFLPVTPGEPASISCRSSQSLLHSNGNNYLDWYLQK 44


>AK126960-1|BAC86763.1|  126|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45013 fis, clone BRAWH3013508. ).
          Length = 126

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 446 FFFSITQYFIKHTANFIIYKGNSVSLFFLTDRNPLLTSTWLRFSYR 309
           FFF   ++ +  T     YK NSVS+ F+T    L+       S+R
Sbjct: 45  FFFRFLRHRVSQTLGHTTYKSNSVSVHFMTFSLGLMVEKGSPISHR 90


>AB208874-1|BAD92111.1|  724|Homo sapiens proprotein convertase
           subtilisin/kexin type 1 preproprotein variant protein.
          Length = 724

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 16/67 (23%), Positives = 29/67 (43%)
 Frame = +2

Query: 170 TALKKSVPAAILVWAFHRIPSREGLTSRRIIGYLKRHFKIANDPGSTGKKIGAMLRSAVD 349
           T+    + A I   A    P+      + ++ +   +  +AN+PG      G M+ S + 
Sbjct: 352 TSASAPLAAGIFALALEANPNLTWRDMQHLVVWTSEYDPLANNPGWKKNGAGLMVNSRIG 411

Query: 350 FGLLEKR 370
           FGLL  +
Sbjct: 412 FGLLNAK 418


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,322,690
Number of Sequences: 237096
Number of extensions: 1387636
Number of successful extensions: 2683
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2683
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)