Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28g17
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025849-1|ABF85749.1|  407|Drosophila melanogaster IP14878p pro...    29   4.4  
AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-P...    29   4.4  
BT024319-1|ABC86381.1|  342|Drosophila melanogaster IP11151p pro...    29   7.6  
AE014134-491|AAF51193.2|  347|Drosophila melanogaster CG2983-PA ...    29   7.6  

>BT025849-1|ABF85749.1|  407|Drosophila melanogaster IP14878p
           protein.
          Length = 407

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 263 GIIFGYHGPQLGLAIDLLF*RILVVPAVVEIRL 165
           G++ GYHG    +  D LF   L++PA+   ++
Sbjct: 351 GVVRGYHGKTQSMDADFLFNEFLLLPAMAPAKI 383


>AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-PC,
            isoform C protein.
          Length = 1751

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -1

Query: 263  GIIFGYHGPQLGLAIDLLF*RILVVPAVVEIRL 165
            G++ GYHG    +  D LF   L++PA+   ++
Sbjct: 1695 GVVRGYHGKTQSMDADFLFNEFLLLPAMAPAKI 1727


>BT024319-1|ABC86381.1|  342|Drosophila melanogaster IP11151p
           protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -2

Query: 121 CQTLLYFYNNTDINIFYIIQISPKLHYRQKILKTK 17
           C  L++F + +D+N+   +++    ++R+  LKTK
Sbjct: 99  CNKLIFFSSRSDLNLTGSVELPVSPYFRESWLKTK 133


>AE014134-491|AAF51193.2|  347|Drosophila melanogaster CG2983-PA
           protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = -2

Query: 121 CQTLLYFYNNTDINIFYIIQISPKLHYRQKILKTK 17
           C  L++F + +D+N+   +++    ++R+  LKTK
Sbjct: 104 CNKLIFFSSRSDLNLTGSVELPVSPYFRESWLKTK 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,528,928
Number of Sequences: 53049
Number of extensions: 482805
Number of successful extensions: 829
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)