Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28g07
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    32   1.9  
AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    32   2.5  
AK127116-1|BAC86836.1|  179|Homo sapiens protein ( Homo sapiens ...    30   10.0 

>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 121 TELLPHLILCTHLHSLNYFILLGF*LYIHIYLCTHI 14
           T +   +  CTH++ +  FI +   +YIHIY+C HI
Sbjct: 160 THVYISVFTCTHVY-ICVFIYICIHVYIHIYICIHI 194


>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 106 HLILCTHLHSLNYFILLGF*LYIHIYLCTHI 14
           H  +C H+H   Y  +  + +Y HI++C HI
Sbjct: 84  HTYMCAHIHMCVYTYIYVY-IYTHIHICVHI 113


>AK127116-1|BAC86836.1|  179|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45173 fis, clone BRAWH3046196. ).
          Length = 179

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 111 YHI*FYVRICIP*TILFYSGFDCTYIFTYVHTYFLYV 1
           Y I FYV  C+  T L Y+     Y++TYVH Y   +
Sbjct: 71  YVILFYVYFCLKTTNLIYNV--SIYLYTYVHMYICII 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,691,690
Number of Sequences: 237096
Number of extensions: 1817435
Number of successful extensions: 3679
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3669
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)