Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28g04
(708 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein. 30 7.1
U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein. 30 7.1
AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter r... 30 7.1
AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter r... 30 7.1
AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase D... 30 7.1
AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase ... 30 7.1
AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens ... 30 7.1
AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase D... 30 7.1
>X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein.
Length = 2349
Score = 30.3 bits (65), Expect = 7.1
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Frame = +1
Query: 253 DQDVKSGKLPNNNISIMENDPNKKESRGRRLFKKVIRRXXXXXXXXXXXXLERRNEESAS 432
++DVK K N ++ + DP+ +E R K+V + +AS
Sbjct: 1329 EEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNAS 1388
Query: 433 IEN-----KSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKL----ELSRI-RTDSVQEDV 582
+ N +S ED+N + + K +D + I + +K+ ++ +I R Q +
Sbjct: 1389 LTNNQNLIQSLKEDLNKVRTEKETI-QKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEE 1447
Query: 583 LRIQDDE--ETEEYSS-----KHVRPNTQTVTIKESTNQIQTRKTSLK 705
L+ Q D+ ET SS +HV + +KE+ NQ +T+ SL+
Sbjct: 1448 LKAQQDKVMETSAQSSGDHQEQHVSVQ-EMQELKETLNQAETKSKSLE 1494
>U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein.
Length = 2363
Score = 30.3 bits (65), Expect = 7.1
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Frame = +1
Query: 253 DQDVKSGKLPNNNISIMENDPNKKESRGRRLFKKVIRRXXXXXXXXXXXXLERRNEESAS 432
++DVK K N ++ + DP+ +E R K+V + +AS
Sbjct: 1329 EEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNAS 1388
Query: 433 IEN-----KSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKL----ELSRI-RTDSVQEDV 582
+ N +S ED+N + + K +D + I + +K+ ++ +I R Q +
Sbjct: 1389 LTNNQNLIQSLKEDLNKVRTEKETI-QKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEE 1447
Query: 583 LRIQDDE--ETEEYSS-----KHVRPNTQTVTIKESTNQIQTRKTSLK 705
L+ Q D+ ET SS +HV + +KE+ NQ +T+ SL+
Sbjct: 1448 LKAQQDKVMETSAQSSGDHQEQHVSVQ-EMQELKETLNQAETKSKSLE 1494
>AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 30.3 bits (65), Expect = 7.1
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Frame = +1
Query: 253 DQDVKSGKLPNNNISIMENDPNKKESRGRRLFKKVIRRXXXXXXXXXXXXLERRNEESAS 432
++DVK K N ++ + DP+ +E R K+V + +AS
Sbjct: 1329 EEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNAS 1388
Query: 433 IEN-----KSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKL----ELSRI-RTDSVQEDV 582
+ N +S ED+N + + K +D + I + +K+ ++ +I R Q +
Sbjct: 1389 LTNNQNLIQSLKEDLNKVRTEKETI-QKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEE 1447
Query: 583 LRIQDDE--ETEEYSS-----KHVRPNTQTVTIKESTNQIQTRKTSLK 705
L+ Q D+ ET SS +HV + +KE+ NQ +T+ SL+
Sbjct: 1448 LKAQQDKVMETSAQSSGDHQEQHVSVQ-EMQELKETLNQAETKSKSLE 1494
>AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter region
(to activated MET oncogene) protein.
Length = 2363
Score = 30.3 bits (65), Expect = 7.1
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Frame = +1
Query: 253 DQDVKSGKLPNNNISIMENDPNKKESRGRRLFKKVIRRXXXXXXXXXXXXLERRNEESAS 432
++DVK K N ++ + DP+ +E R K+V + +AS
Sbjct: 1329 EEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNAS 1388
Query: 433 IEN-----KSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKL----ELSRI-RTDSVQEDV 582
+ N +S ED+N + + K +D + I + +K+ ++ +I R Q +
Sbjct: 1389 LTNNQNLIQSLKEDLNKVRTEKETI-QKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEE 1447
Query: 583 LRIQDDE--ETEEYSS-----KHVRPNTQTVTIKESTNQIQTRKTSLK 705
L+ Q D+ ET SS +HV + +KE+ NQ +T+ SL+
Sbjct: 1448 LKAQQDKVMETSAQSSGDHQEQHVSVQ-EMQELKETLNQAETKSKSLE 1494
>AL035406-9|CAI19891.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 30.3 bits (65), Expect = 7.1
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 406 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 585
E NE+ S E G E +D + V K P+K+K ++K + R + + +++
Sbjct: 18 EMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLK-ENKCKGKRKKKEGSNDELS 76
Query: 586 RIQDD-EETEEYSSKHVRPN 642
++D EE E PN
Sbjct: 77 ENEEDLEEKSESEGSDYSPN 96
>AL031847-10|CAI19450.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 30.3 bits (65), Expect = 7.1
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 406 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 585
E NE+ S E G E +D + V K P+K+K ++K + R + + +++
Sbjct: 18 EMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLK-ENKCKGKRKKKEGSNDELS 76
Query: 586 RIQDD-EETEEYSSKHVRPN 642
++D EE E PN
Sbjct: 77 ENEEDLEEKSESEGSDYSPN 96
>AK127046-1|BAC86802.1| 1225|Homo sapiens protein ( Homo sapiens
cDNA FLJ45103 fis, clone BRAWH3032571, moderately
similar to Chromodomain helicase-DNA-binding protein 4.
).
Length = 1225
Score = 30.3 bits (65), Expect = 7.1
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 406 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 585
E NE+ S E G E +D + V K P+K+K ++K + R + + +++
Sbjct: 18 EMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLK-ENKCKGKRKKKEGSNDELS 76
Query: 586 RIQDD-EETEEYSSKHVRPN 642
++D EE E PN
Sbjct: 77 ENEEDLEEKSESEGSDYSPN 96
>AF425231-1|AAL98962.1| 1954|Homo sapiens chromodomain helicase DNA
binding protein 5 protein.
Length = 1954
Score = 30.3 bits (65), Expect = 7.1
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 406 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 585
E NE+ S E G E +D + V K P+K+K ++K + R + + +++
Sbjct: 18 EMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLK-ENKCKGKRKKKEGSNDELS 76
Query: 586 RIQDD-EETEEYSSKHVRPN 642
++D EE E PN
Sbjct: 77 ENEEDLEEKSESEGSDYSPN 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,423,554
Number of Sequences: 237096
Number of extensions: 1522976
Number of successful extensions: 3322
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3316
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -