Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28f23
(672 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1178 + 31508349-31508461,31510074-31510932 38 0.006
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 34 0.090
12_02_0719 + 22500217-22500395,22500506-22500551,22500671-225007... 33 0.16
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 32 0.48
04_01_0290 + 3843610-3843712,3844088-3846003 32 0.48
08_01_0397 - 3509186-3510291,3510322-3512335 30 1.5
06_01_0510 + 3681369-3681645,3682825-3682886,3683016-3683165,368... 30 1.5
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 30 1.5
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 30 1.5
02_01_0526 - 3830705-3830932,3831684-3831748,3831958-3832104,383... 30 1.5
04_01_0227 - 2877303-2877659,2877755-2877897,2878102-2878183,287... 30 1.9
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 30 1.9
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 29 3.4
04_01_0283 + 3768732-3768792,3769235-3769876,3769907-3770076,377... 29 3.4
03_05_0020 + 19873173-19873949 29 3.4
01_06_0909 - 32903520-32903828,32903899-32903973,32904068-329042... 29 4.5
11_06_0003 - 19155407-19155953,19156114-19156148 28 5.9
11_01_0701 - 5774234-5774404,5774456-5774456,5774558-5774763,577... 28 5.9
02_02_0445 - 10351483-10351606,10351987-10353170 28 5.9
>04_04_1178 + 31508349-31508461,31510074-31510932
Length = 323
Score = 38.3 bits (85), Expect = 0.006
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Frame = +1
Query: 310 EKEAEDVNSMEIRQRKEKKELQ-----AQIQXXXXXXXXXXXXXXXXXXEISRLESELEI 474
E + E + + R RKEK +LQ + EISRL +ELE
Sbjct: 24 ESQQETLEEVLSRHRKEKSKLQDKETSLKKAAAKGSKAEQKAKKKQVEEEISRLSAELEA 83
Query: 475 RHNKEIM----EAKLSSEH-NLEPMVDETRVIKT-------KVSKAQRRRDKKSEQEKIR 618
+H E+ ++ SSE N++ +V + K SK RRR+KK+++E R
Sbjct: 84 KHAAELATFGYKSSGSSEKGNMDTLVKAIAGVSVTSNADSAKPSKGARRREKKAKEEAAR 143
Query: 619 EEEIKLQDKENVHGARNI 672
E+ I+ +++ N+ R I
Sbjct: 144 EQRIQ-EEQNNLVSDRMI 160
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 34.3 bits (75), Expect = 0.090
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = +1
Query: 310 EKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLESELEIRHN-- 483
+ + DV+ ++ +E+K L ++Q E+S++E L +
Sbjct: 537 DNASRDVHCLKGESSEEEKGLHEKLQKALSDLDEAYSAVSERESELSQIEINLHKQKQAM 596
Query: 484 KEIMEAKLSSEHNLEPMVDETRVIKTK-VSKAQRRRDKKSEQEKI 615
+ + E KLS E+ L+ +DE V+K ++ + + + E+EK+
Sbjct: 597 EHLEELKLSMENELKGYMDENNVLKRDLIATTEIEKSLREEKEKL 641
>12_02_0719 +
22500217-22500395,22500506-22500551,22500671-22500745,
22500846-22500932,22501077-22501148,22501267-22501338,
22501448-22501519,22501644-22502510
Length = 489
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 451 RLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEI 630
+L E E E E KL+ E PM ET +K K ++ + + E+E +EE +
Sbjct: 334 KLAEETETASMAETAEVKLAEETETIPMA-ETAEVKLAEEKVMKKNEFEHEEENSKEEYV 392
Query: 631 K 633
K
Sbjct: 393 K 393
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 511 SEHNLEPMVDETRVIKTKVSKAQRRRDKK-SEQEKIREEEIKLQDKENVHGA 663
SE + M++E + + + +RRR K+ EQ+++ EEE K +++E GA
Sbjct: 15 SERRRQKMIEEEKKRLDEEMELRRRRVKEWQEQKRLEEEEAKRREQEAAAGA 66
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 3/125 (2%)
Frame = +1
Query: 289 ENNKMETEKEAEDVNSMEIRQRKEKKE--LQAQIQXXXXXXXXXXXXXXXXXXEISRLES 462
E K+E + E I KE+ E L+ + E+ +L+
Sbjct: 69 EKGKLEKQLEETKAAVQAISSEKEEVERSLKGENDKLRLEVLTAEEKYSQSAAEVEKLQK 128
Query: 463 ELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDK-KSEQEKIREEEIKLQ 639
EL + + AK + + M++ +K+++ + Q D KSE +K+R E + +
Sbjct: 129 ELVALAEVKEVAAKAFDDEKAKMMMESVD-LKSRLEEIQGNMDMIKSENDKLRSEALVAE 187
Query: 640 DKENV 654
K N+
Sbjct: 188 QKLNI 192
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 475 RHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENV 654
RH+++ + SS H+ D+ R + R +++ E+ K RE E + ++KE
Sbjct: 27 RHHRDRDRERSSSRHHHREDRDDDRDRDRDRERRHREKERDREERKAREREEREKEKERE 86
Query: 655 HGAR 666
R
Sbjct: 87 RARR 90
>06_01_0510 +
3681369-3681645,3682825-3682886,3683016-3683165,
3683776-3683952,3684496-3684711,3684802-3686480,
3686602-3686667,3686753-3686822,3686909-3687547
Length = 1111
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 442 EISRLESELEIRHNKEIMEAKLSSEHNLE----PMVDETRVIKTKVSKAQRRRDKKSEQE 609
+I ++ +L I + ++ A + + NL P ET V KTK+S + R D ++ +
Sbjct: 273 KILKVPEQLFIDSDTQVQIATMVAWRNLVNAFLPQASETLVPKTKISPIESRADTNAQLK 332
Query: 610 KIR 618
KIR
Sbjct: 333 KIR 335
>03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 280 RQVENNKMETEKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLE 459
R++E+N E +A+ +++ KEL++Q+ ++ E
Sbjct: 730 RKLEDNCQNLENKAKGKEQFYKNLQEKVKELESQLDSKMHSQITSEKQQNELFGKLKEKE 789
Query: 460 SELEIRHNKEIMEAKLSSEHNLE-PMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKL 636
E+ ++I E SEH L E+ + + ++ ++ + + KI+E E+KL
Sbjct: 790 -EMCTTLQQKIAE---ESEHKLRLQQQSESEIKELELKLKEQEHHRSVAESKIKELELKL 845
Query: 637 QDKEN 651
+++E+
Sbjct: 846 KEQEH 850
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +1
Query: 442 EISRLESELE---IRHNKEIMEAKLSSEHN-LEPMVDETRVIKTKVSKAQRRRDKKSEQE 609
E R+E E E IR KE++EAK E N + M++ R+ K + +A+ + +K E++
Sbjct: 201 EERRMEREREKERIRIGKELLEAKRIEEDNERKRMIELRRLEKEEEKRAREKIRQKLEED 260
Query: 610 K 612
K
Sbjct: 261 K 261
>02_01_0526 -
3830705-3830932,3831684-3831748,3831958-3832104,
3832208-3832256
Length = 162
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 538 DETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGAR 666
+E R K + K + RR + EQ + EEE + + K+ HG R
Sbjct: 19 EEERERKKRRDKKESRRSSRDEQAEEEEEEERRRRKKKKHGDR 61
>04_01_0227 -
2877303-2877659,2877755-2877897,2878102-2878183,
2878289-2878291
Length = 194
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 442 EISRLESELE-IRHNKEIMEAK-LSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKI 615
++ R + +L+ ++ KE +E+K + E + + E R K + +KK+++ K
Sbjct: 82 KMDRYKKDLQNMKKQKEAVESKQIKQEEGYKLLQQEQRKWKRDKENLNSKLEKKTKETKD 141
Query: 616 REEEIKLQDKE 648
+EE+K+ +E
Sbjct: 142 AKEELKITKRE 152
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 310 EKEAEDVNSMEIRQRKEKKELQAQIQXXXXXXXXXXXXXXXXXXEISRLESELEIRHN 483
+KE +D+ + + RK++ LQ +IQ E S+LES L +HN
Sbjct: 392 QKEIDDLERVLLSNRKQEGLLQEEIQKLKDEINNLNSYIESRKSESSKLESALAKKHN 449
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 442 EISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIRE 621
E + ++E E +E E K +E E ++ K K + + +K E+EK ++
Sbjct: 213 EETEKDNEKEKEDKEE--ETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEKLEEEEK-KD 269
Query: 622 EEIKLQDKENVHGARN 669
+E KL++KE + N
Sbjct: 270 KEEKLEEKEKENEEEN 285
>04_01_0283 +
3768732-3768792,3769235-3769876,3769907-3770076,
3770134-3770511,3770602-3770991
Length = 546
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 505 LSSEHNLEPMVDETRVIKTKVS--KAQRRRDKKSEQEKIREEEIKLQDK 645
L + LE ++ET+V +S K + R K E +K+R E + +DK
Sbjct: 53 LGEKGKLEQQLEETKVAVQAISSEKEEVERSLKGENDKLRLEVLTAEDK 101
>03_05_0020 + 19873173-19873949
Length = 258
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 493 MEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEK 612
M L +E N+ P+V +T +++ + ++KK E+EK
Sbjct: 39 MSELLQNERNVVPIVLDTNILQACENNLGNEKEKKDEEEK 78
>01_06_0909 -
32903520-32903828,32903899-32903973,32904068-32904235,
32904508-32904565,32904638-32904879,32905145-32905216,
32905865-32905943,32906734-32907062,32907137-32907256,
32907355-32907429,32908260-32908342,32908942-32908984,
32909271-32909429,32910203-32910281,32910685-32910755,
32910847-32910946,32911023-32911229,32911348-32911442,
32912362-32912436,32912621-32912713,32913078-32913182,
32913851-32913921,32914943-32915096,32916035-32916098,
32916717-32916800,32917543-32917589,32918352-32918411,
32918521-32918592
Length = 1062
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +1
Query: 454 LESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSE---QEKIREE 624
L+ L+ K EAKL S L+ ++D TR++ + +++ R D +E EK+R+
Sbjct: 395 LKLMLKYNGGKAHAEAKLKSALQLQDLLDATRILVPR-ARSGRESDSDAEIEHAEKLRQV 453
Query: 625 EIKLQDKENVHG 660
L++ + G
Sbjct: 454 RAVLEEGGHFSG 465
>11_06_0003 - 19155407-19155953,19156114-19156148
Length = 193
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +1
Query: 442 EISRLESELEIRHNKEIMEAKLSSEHNLEPMV---DETRVIKTKVSKAQRRRDKKSEQEK 612
EIS +ES H+ EI ++ ++ + V DE ++ + + + +++ E+E+
Sbjct: 10 EISYIESYTNWSHHGEIPSKQVPNQVTVRDEVVSRDEDFMVVAEEEEEEEEEEEEEEEEE 69
Query: 613 IREEEIKLQDKE 648
EEE + +++E
Sbjct: 70 EEEEEEEEEEEE 81
>11_01_0701 -
5774234-5774404,5774456-5774456,5774558-5774763,
5775157-5775303,5775423-5775628,5776391-5776580
Length = 306
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/63 (22%), Positives = 37/63 (58%)
Frame = +1
Query: 457 ESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKL 636
+SE I + +++ ++ + N++ + + K ++ +A++RR K+ ++ REE+ K
Sbjct: 244 KSEKPIGNERDLKDSNVKWNSNMKKL---KKARKKRLKRAEKRRLKREKKRLKREEKRKS 300
Query: 637 QDK 645
+D+
Sbjct: 301 EDQ 303
>02_02_0445 - 10351483-10351606,10351987-10353170
Length = 435
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +1
Query: 469 EIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKE 648
EIR + I E L+ E N+E + + + + + ++ + R+ + E + +L++KE
Sbjct: 227 EIRKEEHI-EKTLNEEANIEDVDTDDELNEAEEYESWKNREIARIKRDREERDARLKEKE 285
Query: 649 NVHGARNI 672
+ RN+
Sbjct: 286 EIEKVRNM 293
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,675,757
Number of Sequences: 37544
Number of extensions: 151542
Number of successful extensions: 663
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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