Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28f19
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.91 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.91 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.1  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   3.7  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   6.4  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   8.5  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   8.5  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   8.5  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   8.5  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 289 LRLPSIIELSLKCLNALLIY 230
           LRLP+I  + LKCL  L  +
Sbjct: 386 LRLPAIRSIGLKCLEYLFFF 405


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 289 LRLPSIIELSLKCLNALLIY 230
           LRLP+I  + LKCL  L  +
Sbjct: 386 LRLPAIRSIGLKCLEYLFFF 405


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 25  ETNIQ*ISAYLGIMYYHLPKYSSLFV 102
           E+NI  +   L + Y H+P+YSS  +
Sbjct: 258 ESNIASVLHALQLYYPHVPEYSSSII 283


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 25  ETNIQ*ISAYLGIMYYHLPKYSSLFV 102
           E+NI  +   L + Y H+P+YSS  +
Sbjct: 273 ESNIASVLHALQLYYPHVPEYSSSII 298


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 358 SGYFATISISFFFCFAVGYTLR*LRLPSII 269
           +G F++ISI+F     +G+ +    +PSI+
Sbjct: 215 AGNFSSISITFKLAREMGFFMMDYYIPSIL 244


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 121 NIWSNYSFPIIKYYYNVNKINE 186
           N  +NY+    K YYN+N I +
Sbjct: 339 NYNNNYNNNYKKLYYNINYIEQ 360


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 130 SNYSFPIIKYYYNVNKINE 186
           +NY+    K YYN+N I +
Sbjct: 103 NNYNNNCKKLYYNINYIEQ 121


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 130 SNYSFPIIKYYYNVNKINE 186
           +NY+    K YYN+N I +
Sbjct: 103 NNYNNNCKKLYYNINYIEQ 121


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 130 SNYSFPIIKYYYNVNKINE 186
           +NY+    K YYN+N I +
Sbjct: 103 NNYNNNCKKLYYNINYIEQ 121


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 130 SNYSFPIIKYYYNVNKINE 186
           +NY+    K YYN+N I +
Sbjct: 103 NNYNNNCKKLYYNINYIEQ 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,994
Number of Sequences: 438
Number of extensions: 3603
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)