Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28f13
         (497 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R894 Cluster: Putative uncharacterized protein PY0732...    33   2.7  
UniRef50_A4RFE0 Cluster: Putative uncharacterized protein; n=1; ...    33   2.7  
UniRef50_UPI0000D56B69 Cluster: PREDICTED: similar to toll-like ...    33   3.6  
UniRef50_Q23CS0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.7  
UniRef50_Q23GE5 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  

>UniRef50_Q7R894 Cluster: Putative uncharacterized protein PY07329;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY07329 - Plasmodium yoelii yoelii
          Length = 834

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -3

Query: 492 FLNIYNYIFIYTNFHVPITSNSR*IHRYKLKTIVYTEIITCFL 364
           FL  Y YIF   NF +  TSN   I   K+K ++Y + I  FL
Sbjct: 362 FLKKYEYIFQIYNFKIGYTSNE--ISGIKIKQLIYEQFIHIFL 402


>UniRef50_A4RFE0 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 783

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +2

Query: 335 WTLFSGAFCTKKQVIISVYTIVFNLYLCI--YLLFDVI 442
           WT F GAF T    +    +++FN+++ I  YLLF VI
Sbjct: 209 WTTFCGAFATGALYVTPKASLIFNIFMNIGLYLLFTVI 246


>UniRef50_UPI0000D56B69 Cluster: PREDICTED: similar to toll-like
           receptor 13; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to toll-like receptor 13 - Tribolium castaneum
          Length = 822

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 17/66 (25%), Positives = 35/66 (53%)
 Frame = -3

Query: 408 KLKTIVYTEIITCFLVQKAPENNVQYTVVSYASKEPLEHSFLYYVAV*IFSF*TSAV*MV 229
           K+  ++  EI  CF     P++    T+  + S++P  H+ L ++   +F F   +  +V
Sbjct: 571 KIMKLIENEITLCFF----PDSTTGLTIKEFLSEKPDCHNLLIFILPTVFVFLLISSFVV 626

Query: 228 VLYFYQ 211
           VLY+++
Sbjct: 627 VLYYFR 632


>UniRef50_Q23CS0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2072

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +2

Query: 302 GSFDAYETTVYWTLFSGAFCTKKQVII---SVYTIVFNLYLCIYLL 430
           GSF  + TT++  LF+G+F +KK  +    ++Y + FN+Y  ++ L
Sbjct: 259 GSFTVWYTTMF--LFNGSFSSKKDTLACDNTIYILQFNIYRILFSL 302


>UniRef50_Q23GE5 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2366

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
 Frame = -2

Query: 205  SSSKVRASIISDTSLQSVV-FESFRDLVFGGHFLQTEPFILLNF-----YDYDNVNLVLF 44
            ++S +   I  DT+ QSV  F+ F DL     F  ++  IL NF     Y Y N+N + F
Sbjct: 875  TNSLIEEIIFKDTTQQSVQGFQIFADLQIAIAFKSSQ-LILKNFKDGQTYSYTNINNLSF 933

Query: 43   YILHK 29
            Y L K
Sbjct: 934  YNLEK 938


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,382,941
Number of Sequences: 1657284
Number of extensions: 8571553
Number of successful extensions: 20070
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20052
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)