Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28f06
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    45   3e-06
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    40   8e-05
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    40   8e-05
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    40   8e-05
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    40   8e-05
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   4.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.1  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +3

Query: 162 MRECISVHVGQAGVQMGVACW 224
           MRECISVHVGQAGVQ+G  CW
Sbjct: 1   MRECISVHVGQAGVQIGNPCW 21


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 8e-05
 Identities = 19/75 (25%), Positives = 36/75 (48%)
 Frame = +3

Query: 483 HYSTGREVLSPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFGKKSK 662
           HY+ G E++  V++ +RK  + C  LQ                  LL+ K+ +E+  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 663 LEFAIYPAPQVSTAV 707
             +++ P+P+VS  V
Sbjct: 61  NTYSVVPSPKVSDTV 75


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 8e-05
 Identities = 19/75 (25%), Positives = 36/75 (48%)
 Frame = +3

Query: 483 HYSTGREVLSPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFGKKSK 662
           HY+ G E++  V++ +RK  + C  LQ                  LL+ K+ +E+  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 663 LEFAIYPAPQVSTAV 707
             +++ P+P+VS  V
Sbjct: 61  NTYSVVPSPKVSDTV 75


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 8e-05
 Identities = 19/75 (25%), Positives = 36/75 (48%)
 Frame = +3

Query: 483 HYSTGREVLSPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFGKKSK 662
           HY+ G E++  V++ +RK  + C  LQ                  LL+ K+ +E+  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 663 LEFAIYPAPQVSTAV 707
             +++ P+P+VS  V
Sbjct: 61  NTYSVVPSPKVSDTV 75


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 39.9 bits (89), Expect = 8e-05
 Identities = 19/75 (25%), Positives = 36/75 (48%)
 Frame = +3

Query: 483 HYSTGREVLSPVMERIRKLADQCTGLQXXXXXXXXXXXXXXXXXXLLMEKLSDEFGKKSK 662
           HY+ G E++  V++ +RK  + C  LQ                  LL+ K+ +E+  +  
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60

Query: 663 LEFAIYPAPQVSTAV 707
             +++ P+P+VS  V
Sbjct: 61  NTYSVVPSPKVSDTV 75


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 219  TRRPSGPRLGPR 184
            T RPSGP +GPR
Sbjct: 1144 TFRPSGPAMGPR 1155


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 628  RSYLTSLERRVNWN 669
            R YL++L++R  WN
Sbjct: 1646 REYLSTLQKRAKWN 1659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,742
Number of Sequences: 2352
Number of extensions: 12079
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)