Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte28f04
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0556 + 4390000-4390431 30 1.6
10_08_0931 - 21647562-21649037 30 2.2
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 30 2.2
04_04_0036 - 22307328-22308026 29 2.9
04_03_0278 - 13761999-13762462,13762628-13762727,13763065-137632... 29 2.9
01_06_1503 + 37813854-37813917,37814035-37814073,37814766-378149... 29 3.8
10_02_0143 + 5795028-5795108,5795197-5795403,5795878-5795976,579... 29 5.0
10_01_0003 + 46158-46428,46588-46706,46819-46928,48977-49415,495... 29 5.0
08_01_0009 + 68825-68950,72571-72669,72841-72929,74971-75087,757... 29 5.0
12_02_0895 + 24094809-24094886,24097197-24097402,24097493-24097919 28 6.6
12_01_0591 - 4835894-4836328,4836343-4837882,4838911-4839050,484... 28 6.6
11_01_0342 + 2548147-2548275,2548385-2548425,2548521-2548570,254... 28 6.6
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 28 6.6
07_03_0842 - 21952483-21954135,21957361-21958108,21958266-21958534 28 6.6
04_04_1676 - 35302498-35302836,35302911-35302997,35303063-353032... 28 6.6
04_04_0760 - 27837170-27837328,27837441-27837504,27837812-278381... 28 6.6
12_02_0377 + 18342631-18342675,18343654-18343771,18344233-183443... 28 8.8
11_05_0043 - 18561039-18562114,18562338-18562503 28 8.8
08_02_0246 + 14745367-14745372,14745452-14746106,14746299-147472... 28 8.8
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 28 8.8
>11_01_0556 + 4390000-4390431
Length = 143
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +3
Query: 519 RCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSKSKY 659
R R+L TPSA P+PP M P P R+ GE + + S Y
Sbjct: 46 RLRQLVTPSAPPLPPETMNP------PPRRQLTGEFVDVELGNASLY 86
>10_08_0931 - 21647562-21649037
Length = 491
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 510 SKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHT 689
S+ R S+P A P PPP L R+ +S K + ++ + + +
Sbjct: 262 SRRRSPYKSSPPAPPPPPPPFLVHGYHPPAAERRTAAKSFKEELQEQTSHSFTTSEFSRS 321
Query: 690 YSNLSPAASPR 722
SN S +A PR
Sbjct: 322 SSN-SSSAKPR 331
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 489 CSRQPTVSKARCRRLSTPSAQPVPPPQMLPSLQL 590
CS TV+ R R+ P+PPP +P+L +
Sbjct: 250 CSSSDTVTTPRNRKPELSKLPPIPPPPPMPALSV 283
>04_04_0036 - 22307328-22308026
Length = 232
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 459 RRRNVNCAA-CC--SRQPTVSKARCRRLSTPSAQPVPPPQ 569
R+RN C A CC SR S A C + Q +PPPQ
Sbjct: 40 RQRNGRCRALCCGASRLSVSSSASCSSVEYAVEQRLPPPQ 79
>04_03_0278 -
13761999-13762462,13762628-13762727,13763065-13763289,
13763347-13763415,13763605-13764432,13764706-13764779,
13818821-13818905
Length = 614
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 480 AACCSRQPTVSKARCRRLS-TPSAQPVPPPQMLPSLQL 590
+A C +P ++ RR P ++P+PPP LPS L
Sbjct: 550 SAACFLEPLTNRRLTRRCRHRPPSKPLPPPPPLPSKPL 587
>01_06_1503 +
37813854-37813917,37814035-37814073,37814766-37814983,
37815629-37815684,37816787-37816850,37818796-37819163,
37819251-37820028
Length = 528
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 649 NQSTTGGFLACVTHIAIYLPLPLLVT 726
N S T GF AC+ A+YLP+ LL T
Sbjct: 202 NVSWTVGFAACLATTAVYLPVFLLGT 227
>10_02_0143 +
5795028-5795108,5795197-5795403,5795878-5795976,
5796136-5796224,5797876-5797992,5798262-5798367,
5798522-5798606,5798699-5798808,5799335-5799465,
5799686-5799782,5800310-5800603
Length = 471
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = -2
Query: 624 ILLYIYDVSALSAVGTAASVAEVLAELM--ALTACDTALSILL 502
+LL+ VSAL+ +G S+AEV+++L +T+ + L I+L
Sbjct: 271 LLLFAGSVSALAYLGPKESIAEVISDLKLDIITSLRSRLDIIL 313
>10_01_0003 +
46158-46428,46588-46706,46819-46928,48977-49415,
49511-49633,49805-50106,50143-50350,50729-51448
Length = 763
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +2
Query: 116 VPSVANGDCGRNRPFTAKASGDAVACDLRRKETYDDNFKH---HDKRSRSKNKIPKNVRN 286
VP++ N N F +S D + L +E D NFK +RSR + R
Sbjct: 283 VPNLQNAQSAFNSTFQPGSSVDMESLVLYPQEILDKNFKQVILEAERSRKDAFVELLKRK 342
Query: 287 DLESALVGL 313
D ES + G+
Sbjct: 343 DTESRVAGV 351
>08_01_0009 +
68825-68950,72571-72669,72841-72929,74971-75087,
75747-75906,76419-76549,76810-76906,77584-77877
Length = 370
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = -2
Query: 624 ILLYIYDVSALSAVGTAASVAEVLAELM--ALTACDTALSILL 502
+LL+ VSAL+ +G S+AEV+++L +T+ + L I+L
Sbjct: 170 LLLFAGSVSALAYLGPKESIAEVISDLKLDIITSLRSRLDIIL 212
>12_02_0895 + 24094809-24094886,24097197-24097402,24097493-24097919
Length = 236
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +2
Query: 263 KIPKNVRNDLESALVGLCDVWFEDIKPHLIRNNIKVHFHGAPPESGDHDGLAAHLTDCSH 442
++P +V+ E L L V + + ++ +H AP S D + + LT C H
Sbjct: 70 RLPDSVQQARERLLQRLNSVDLSGRRQNTSLSSETIHGGVAPGVSTTADSIFSSLTSCFH 129
Query: 443 VDPASSAAQCELCRLLFEAANSIE 514
D S A C+L E N+ +
Sbjct: 130 TD--VSIAPCKLQESTAETFNTAD 151
>12_01_0591 -
4835894-4836328,4836343-4837882,4838911-4839050,
4840051-4840605
Length = 889
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -1
Query: 667 LQSYF---DFDEICVFCDSPLHLRCLGVVSCR 581
L S+F FD + C SP HLR L + CR
Sbjct: 697 LDSHFILVSFDRLSDLCPSPRHLRRLNLYGCR 728
>11_01_0342 +
2548147-2548275,2548385-2548425,2548521-2548570,
2548830-2548974,2549854-2549859,2550122-2550245,
2550422-2550877,2550960-2551013
Length = 334
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 501 PTVSKARCRRLSTPSAQPVPPPQMLPSL 584
PT + A+ TP QP PPP PSL
Sbjct: 266 PTSASAQRATYGTPLLQPFPPPTPPPSL 293
>08_01_0774 +
7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 534 STPSAQPVPPPQMLPSLQLTTP 599
S P A P PPPQ P QL P
Sbjct: 60 SPPKASPTPPPQPQPHPQLQPP 81
>07_03_0842 - 21952483-21954135,21957361-21958108,21958266-21958534
Length = 889
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 328 RRYKTSFDPK*YQGSLPRRATGKRRP--RWSGGSLD*LLTCRSSVIGG 465
R TS +P ++G+ P T + RWSGGSL+ + ++++ G
Sbjct: 593 RSVYTSMEPAAFRGTAPINLTERLYQILRWSGGSLEMFFSHSNALLAG 640
>04_04_1676 -
35302498-35302836,35302911-35302997,35303063-35303286,
35303375-35303675,35303762-35303860,35304895-35305032,
35305108-35305326
Length = 468
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 483 ACCSRQPTVSKARCRRLSTPSAQPVPPPQMLPS 581
+C P + + S P+A P P P+M PS
Sbjct: 363 SCSLSSPPAAPPKMAAASPPAAAPAPAPEMAPS 395
>04_04_0760 -
27837170-27837328,27837441-27837504,27837812-27838160,
27838906-27838960,27839489-27839821
Length = 319
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 534 STPSAQPVPPPQMLPSLQLTTPRHRKCKGESQKTHISSKSKYDWRVPRLCHTYSNLSPAA 713
STP++ P PPP P+ P+ RK E H S V L + +SP +
Sbjct: 19 STPTSDPKPPPPP-PTSSTAAPKKRKL--EEVGFHHSPYYNIRAAVANLRGRFIQVSPTS 75
Query: 714 SPR 722
+P+
Sbjct: 76 NPK 78
>12_02_0377 +
18342631-18342675,18343654-18343771,18344233-18344380,
18345142-18345220,18345330-18345449,18346112-18346285,
18346424-18346525
Length = 261
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 501 PTVSKARCRRLSTPSAQPVPPPQMLPSLQLTTPRHR 608
P V +R L TPS + + PP++L S + TP +
Sbjct: 18 PAVCFSRYSTLVTPSDEVLVPPELLSSRTVGTPERK 53
>11_05_0043 - 18561039-18562114,18562338-18562503
Length = 413
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -2
Query: 678 GEEPSSRTLISMKYVFFAILLYIYDVSA-LSAVGTAASVAEVLAELMALTACDTALSILL 502
G + L+ ++ +LY++ SA SA+ A +AE L AC I L
Sbjct: 135 GADARLAELLGLRATVQRTVLYMHGCSAGCSALRLAKDIAESNRRARVLVACAEVFLIAL 194
Query: 501 AASNSKRHNSHCAA 460
AA + R ++ AA
Sbjct: 195 AAPDEARLDALVAA 208
>08_02_0246 +
14745367-14745372,14745452-14746106,14746299-14747269,
14748123-14749168,14750669-14751473
Length = 1160
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 230 KHHDKRSRSKNKIPKNVRNDLESALVGLCDVWF 328
K H +R S++++ + +R VGL +WF
Sbjct: 477 KLHSRRKASRDRLSEQMRKTFRIEAVGLMSLWF 509
>02_04_0371 +
22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 537 TPSAQPVPPPQMLPSLQLTTPRHRKC 614
T P PPP + P L PR R+C
Sbjct: 23 TTPPPPPPPPLLSPRRPLLAPRRRRC 48
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,017,700
Number of Sequences: 37544
Number of extensions: 464231
Number of successful extensions: 2277
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2267
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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