Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28f01
         (754 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6FX84 Cluster: Candida glabrata strain CBS138 chromoso...    36   1.4  
UniRef50_A3TIN6 Cluster: Probable solute-binding lipoprotein; n=...    34   3.3  
UniRef50_Q24GM4 Cluster: Putative uncharacterized protein; n=2; ...    34   3.3  
UniRef50_Q9VSY0 Cluster: CG3672-PA; n=2; Sophophora|Rep: CG3672-...    34   4.3  
UniRef50_Q08I39 Cluster: Putative uncharacterized protein rom-4;...    33   10.0 

>UniRef50_Q6FX84 Cluster: Candida glabrata strain CBS138 chromosome
           B complete sequence; n=1; Candida glabrata|Rep: Candida
           glabrata strain CBS138 chromosome B complete sequence -
           Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 394

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 25/79 (31%), Positives = 35/79 (44%)
 Frame = +1

Query: 4   GQNDGSYNPNQGSYQTGQGFTGKPLNEKYEEPEPTGPPRGFFYSFTYPVSSIVLKSDLQG 183
           GQN G  N  QGS+  GQ         +   P+      G F S     SS + K+D QG
Sbjct: 238 GQNQGYNNQGQGSHGYGQNEYSNDGYGQSRPPQQQNQESGTFSSIMNMASSYMHKNDGQG 297

Query: 184 GSAPTRYPADKDTISVGGY 240
              P   P+++ + + GGY
Sbjct: 298 QGRP---PSNQYSNNGGGY 313


>UniRef50_A3TIN6 Cluster: Probable solute-binding lipoprotein; n=1;
           Janibacter sp. HTCC2649|Rep: Probable solute-binding
           lipoprotein - Janibacter sp. HTCC2649
          Length = 445

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 213 VGWI-SSWCRSSLQITLQDDTGDWVGETVEEAPWWTG 106
           +G++ +SWC   L+ T+ D TG W    V E P W G
Sbjct: 274 IGYVCASWCAGGLKATVPDQTGKW---AVAELPSWDG 307


>UniRef50_Q24GM4 Cluster: Putative uncharacterized protein; n=2;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2404

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 13/57 (22%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
 Frame = +2

Query: 563  INTMFFFNSNHV*VIILVQDFLYSHHFMYYIYK----VVIVSYLYVLQLITNLEFDL 721
            IN +  +++N   + +L+  F+YS+ + Y++      ++++++L++L ++ N+  DL
Sbjct: 1364 INQLDHYSTNVCAISVLLGLFIYSNDYNYFVIMSLILIILINFLFILMMVRNIILDL 1420


>UniRef50_Q9VSY0 Cluster: CG3672-PA; n=2; Sophophora|Rep: CG3672-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 260

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +1

Query: 7   QNDGSYNPNQGSYQTGQGFTGKPLNEKYEEPEPTGPPRGFFYSFTYPV 150
           Q +G Y P +  YQ       +P       PE TG P+GFFY+F Y V
Sbjct: 194 QQEGRYQPTEPEYQPY--VHEEP--PYVPGPEETGEPKGFFYAFDYNV 237


>UniRef50_Q08I39 Cluster: Putative uncharacterized protein rom-4;
           n=4; Caenorhabditis|Rep: Putative uncharacterized
           protein rom-4 - Caenorhabditis elegans
          Length = 982

 Score = 32.7 bits (71), Expect = 10.0
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 213 VGWISSWCRSSLQITLQDDTGDWVGETVEEAPWWTGWFGLFVFFI*RLS 67
           +G +  W   S +  L  +T   + E  +E PW+T W      F+  LS
Sbjct: 397 IGRVGQWMGRSYKDNLSKETRKMLAEGTDERPWFTYWITTIQIFVCLLS 445


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,615,837
Number of Sequences: 1657284
Number of extensions: 13594450
Number of successful extensions: 35281
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35230
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62146450145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)