Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28f01
         (754 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224...    29   3.0  

>01_07_0239 +
           42222024-42222133,42222220-42222301,42222396-42222486,
           42222702-42222814,42222912-42222984,42223080-42223178,
           42223201-42223406,42223693-42223832,42223912-42223969,
           42224067-42224137,42224207-42224741
          Length = 525

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 4   GQNDGSYNPNQGSYQTGQGFTGKPLNEKYEEPEPTG 111
           G N G YNPN+G    G G    P   +   P P G
Sbjct: 435 GGNQGGYNPNRGGQGGGYGSGPYPQQGRGPPPYPGG 470


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,339,587
Number of Sequences: 37544
Number of extensions: 349021
Number of successful extensions: 826
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)