Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28e19
         (289 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221...    25   9.8  
02_05_1134 - 34352154-34352375,34353683-34353746,34353820-343548...    25   9.8  
01_01_0988 - 7806113-7806193,7806275-7806499,7806589-7806709,780...    25   9.8  

>06_03_0191 - 17720512-17721435,17721718-17721843,17721940-17722140,
            17722189-17722332,17722415-17722722,17723433-17723568,
            17723748-17723841,17723976-17724073,17724951-17725004,
            17725704-17726150,17726227-17726393,17726540-17726663,
            17726751-17726837,17727000-17727056,17727492-17727560,
            17727664-17727811,17727893-17728116,17728842-17728958,
            17729649-17729742,17730573-17730640,17733278-17733334,
            17733412-17733511,17733638-17733674,17734077-17734200,
            17735254-17735322,17735371-17735410,17735905-17735993,
            17736849-17736953,17737033-17737104,17737814-17737936,
            17738049-17738117,17738966-17739059,17739145-17739231,
            17740184-17740351,17740436-17740552,17741484-17741590,
            17741671-17741803,17742564-17742667,17743504-17743629,
            17744148-17744216,17744996-17745064,17745278-17745358,
            17745444-17745533,17745896-17746000,17747803-17747873,
            17748320-17748461,17749266-17749330,17750081-17750168,
            17750236-17750325,17750437-17750673,17751064-17751170,
            17751625-17751832,17752376-17752546
          Length = 2366

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
 Frame = +3

Query: 132  LFIAYGQYFX---NYIKIR*LKYVTSCLKKATSYGQ*CIYTNSYCCVLXLNLSDF 287
            + + YG  F    N +KIR L  +  CLK             + C  L   L +F
Sbjct: 855  MLLCYGSIFACQDNTVKIRLLNNLDQCLKSGKKQSWFMTVVTNSCVALLSGLKEF 909


>02_05_1134 - 34352154-34352375,34353683-34353746,34353820-34354859,
            34355193-34355261,34355502-34355606,34355992-34356161,
            34356244-34356351,34356397-34356525,34356577-34356681,
            34357186-34357475,34357575-34357679,34358195-34358289,
            34358474-34358569,34358660-34358782,34359120-34359174,
            34359254-34359417,34359881-34359971,34360180-34360334,
            34360823-34361002,34361314-34361487,34361776-34361917,
            34362023-34362325,34362443-34362522
          Length = 1354

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 188  IRNFVPKKSNVLRPIMYLH 244
            + +F+P K N  RP++ +H
Sbjct: 1039 VDDFIPDKENACRPVLQVH 1057


>01_01_0988 -
           7806113-7806193,7806275-7806499,7806589-7806709,
           7807065-7807256,7807884-7807947,7808135-7808261,
           7808338-7808411,7808494-7808598,7808763-7808865,
           7808966-7809028,7809113-7809296,7809788-7809858
          Length = 469

 Score = 25.0 bits (52), Expect = 9.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 85  NLNITAKFCNCNKLACYLLLMDSI 156
           ++N+  K CN   L  YL+LMD++
Sbjct: 381 SINVKDKDCNFFSLYVYLVLMDNL 404


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,016,699
Number of Sequences: 37544
Number of extensions: 86109
Number of successful extensions: 121
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 304131700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)