Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28e16
         (417 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA...    44   0.001
UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA...    38   0.083
UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p...    34   1.0  
UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C oxidoreductase-s...    34   1.0  
UniRef50_Q5CRR2 Cluster: Putative uncharacterized protein; n=2; ...    33   1.8  
UniRef50_A4SVF5 Cluster: Putative uncharacterized protein; n=1; ...    31   9.6  

>UniRef50_UPI0000D55426 Cluster: PREDICTED: similar to CG14482-PA;
           n=2; Endopterygota|Rep: PREDICTED: similar to CG14482-PA
           - Tribolium castaneum
          Length = 63

 Score = 44.0 bits (99), Expect = 0.001
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +1

Query: 91  VGKKHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 234
           +GKKH+EI                    Y TDWK+ +  +PYYNGKFK
Sbjct: 14  IGKKHIEIASQWIGSAVAFGATAGVGITYATDWKLILQYMPYYNGKFK 61


>UniRef50_UPI00005184F7 Cluster: PREDICTED: similar to CG14482-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG14482-PA - Apis mellifera
          Length = 51

 Score = 37.9 bits (84), Expect = 0.083
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +1

Query: 85  VRVGKKHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 234
           +++GK+H EI                    + TDWKV    IP+Y  KFK
Sbjct: 1   MKIGKRHFEIATKWIPSLMVYTGAAGLAMVFVTDWKVIAGYIPFYGNKFK 50


>UniRef50_Q500Y7 Cluster: RH56961p; n=3; Sophophora|Rep: RH56961p -
           Drosophila melanogaster (Fruit fly)
          Length = 57

 Score = 34.3 bits (75), Expect = 1.0
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +1

Query: 94  GKKHLEIXXXXXXXXXXXXXXXXXXXXYFTDWKVFVANIPYYNGKFK 234
           GKKH EI                    Y+TDWK+ +  +P Y  KF+
Sbjct: 8   GKKHAEIASSFIRSGAGFGGAAGLAVLYYTDWKLVLQYVPIYGSKFE 54


>UniRef50_Q17N95 Cluster: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative; n=1;
           Aedes aegypti|Rep: Ubiquinol cytochrome C
           oxidoreductase-subunit 6.4kD-subunit, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 54

 Score = 34.3 bits (75), Expect = 1.0
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 175 YFTDWKVFVANIPYYNGKF 231
           Y TDW+V V  IP+Y GKF
Sbjct: 33  YLTDWRVIVTYIPFYGGKF 51


>UniRef50_Q5CRR2 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 710

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 194 TFQSVKYRSVTKAAPPNPPAEDRNAVA-ISKCFLPTRTIFNSSW 66
           TF + K  S+    P N P  + N V+ IS C L    IFNS+W
Sbjct: 392 TFGNNKETSIKTPPPSNFPTNNSNCVSNISTCDLSYNAIFNSNW 435


>UniRef50_A4SVF5 Cluster: Putative uncharacterized protein; n=1;
           Polynucleobacter sp. QLW-P1DMWA-1|Rep: Putative
           uncharacterized protein - Polynucleobacter sp.
           QLW-P1DMWA-1
          Length = 303

 Score = 31.1 bits (67), Expect = 9.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 86  FVWARNIWKSPPHSCLQPEG 145
           F+W+  +W+S    CLQP+G
Sbjct: 181 FIWSAKVWESLDRECLQPKG 200


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,443,630
Number of Sequences: 1657284
Number of extensions: 5449679
Number of successful extensions: 12501
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12497
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)