Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte28e10
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3256|AAF49087.1|  720|Drosophila melanogaster CG17732-P...    38   0.017
AY058454-1|AAL13683.1|  560|Drosophila melanogaster GH24674p pro...    31   1.5  
AE014298-748|AAN09143.1|  504|Drosophila melanogaster CG3239-PB,...    31   1.5  
AE014298-747|AAF46038.2|  560|Drosophila melanogaster CG3239-PA,...    31   1.5  
AF056198-1|AAC12945.1|  489|Drosophila melanogaster Hsp70/Hsp90 ...    30   3.4  
X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein ...    29   5.9  
X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein ...    29   5.9  
AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-P...    29   5.9  

>AE014296-3256|AAF49087.1|  720|Drosophila melanogaster CG17732-PA
           protein.
          Length = 720

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
 Frame = +3

Query: 255 QWTQQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVRPKRHDARSHYFKEIRKDNLQ 434
           QW  QN   Y TN N LF+ ++ H        +  KLP   ++H+A     ++  KDNLQ
Sbjct: 369 QWNPQNADNY-TNQNQLFHKQQLHIQNQPYLQHHFKLPASQQQHEAIFQQQQQAGKDNLQ 427

Query: 435 ----LYKRI 449
               LY+RI
Sbjct: 428 QLRVLYQRI 436


>AY058454-1|AAL13683.1|  560|Drosophila melanogaster GH24674p
           protein.
          Length = 560

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +3

Query: 198 VVDTSPPRFSSAPMYRN-FEQWTQQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVR 374
           +V+ + PR    P+ ++ F +  Q+  Q    N N  F    QHFL GK+    L+L + 
Sbjct: 238 LVEKNHPRLKEEPVLQDIFAELKQRFGQKLLANRNN-FTRSTQHFLLGKLKRMRLRLSIL 296

Query: 375 PKRHDARS 398
           P+   A+S
Sbjct: 297 PRNSSAQS 304


>AE014298-748|AAN09143.1|  504|Drosophila melanogaster CG3239-PB,
           isoform B protein.
          Length = 504

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +3

Query: 198 VVDTSPPRFSSAPMYRN-FEQWTQQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVR 374
           +V+ + PR    P+ ++ F +  Q+  Q    N N  F    QHFL GK+    L+L + 
Sbjct: 182 LVEKNHPRLKEEPVLQDIFAELKQRFGQKLLANRNN-FTRSTQHFLLGKLKRMRLRLSIL 240

Query: 375 PKRHDARS 398
           P+   A+S
Sbjct: 241 PRNSSAQS 248


>AE014298-747|AAF46038.2|  560|Drosophila melanogaster CG3239-PA,
           isoform A protein.
          Length = 560

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +3

Query: 198 VVDTSPPRFSSAPMYRN-FEQWTQQNRQIYATNINLLFNIKRQHFLRGKVDCNWLKLPVR 374
           +V+ + PR    P+ ++ F +  Q+  Q    N N  F    QHFL GK+    L+L + 
Sbjct: 238 LVEKNHPRLKEEPVLQDIFAELKQRFGQKLLANRNN-FTRSTQHFLLGKLKRMRLRLSIL 296

Query: 375 PKRHDARS 398
           P+   A+S
Sbjct: 297 PRNSSAQS 304


>AF056198-1|AAC12945.1|  489|Drosophila melanogaster Hsp70/Hsp90
           organizing proteinhomolog protein.
          Length = 489

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
 Frame = +3

Query: 411 EIRKDNLQLYKRIVKAKARVQTTAELIEDWK----------TKHREIEKDTTMLYPYGPL 560
           E+ +++   +K I K+ AR+  T   +E++K          ++HR  E  T++      +
Sbjct: 236 EVGRESRADFKLIAKSFARIGNTYRKLENYKQAKVYYEKAMSEHRTPEIKTSLSEVEAKI 295

Query: 561 AEDH--AYISTQRTEATKKVPGLYWSGGD 641
            E+   AYI+ ++ E  K+   L++  GD
Sbjct: 296 KEEERMAYINPEKAEEEKEQGNLFFKNGD 324


>X98082-1|CAA66706.1| 1332|Drosophila melanogaster RADHA protein
            protein.
          Length = 1332

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 408  KEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTK 509
            +E+R++NLQLY    + K R+    + I D K +
Sbjct: 1179 RELRQENLQLYSEKTELKVRIAALEQQIGDLKAQ 1212


>X98081-2|CAA66705.1| 1332|Drosophila melanogaster RADHA protein
            protein.
          Length = 1332

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 408  KEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTK 509
            +E+R++NLQLY    + K R+    + I D K +
Sbjct: 1179 RELRQENLQLYSEKTELKVRIAALEQQIGDLKAQ 1212


>AE014297-3789|AAF56461.1| 1332|Drosophila melanogaster CG11908-PA
            protein.
          Length = 1332

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 408  KEIRKDNLQLYKRIVKAKARVQTTAELIEDWKTK 509
            +E+R++NLQLY    + K R+    + I D K +
Sbjct: 1179 RELRQENLQLYSEKTELKVRIAALEQQIGDLKAQ 1212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,315,406
Number of Sequences: 53049
Number of extensions: 607975
Number of successful extensions: 1617
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1617
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)